RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 C1orf229Q6ZS94 237 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-225ENST00000530094 TP53TG3Q9ULZ0 132 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 PKD1L2Q7Z442 2459 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 SYCNQ0VAF6 134 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 LINC00474Q9P2X8 69 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 LRRK2Q5S007 2527 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 AVPP01185 164 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 CRIP3Q6Q6R5 217 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 CLEC2BQ92478 149 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 ZFAND3Q9H8U3 227 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 USP9XQ93008 2570 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-225ENST00000530094 CASC2Q6XLA1 102 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 MBD6Q96DN6 1003 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 IGKV4-1P06312 121 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 UBE2D1P51668 147 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 Q6ZPA2 131 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 LINC00467Q9BRT7 94 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 SS18L2Q9UHA2 77 aa6.31□□□□□ -1.4
CTNND1-225ENST00000530094 P0DMU3 169 aa6.3□□□□□ -1.4
CTNND1-225ENST00000530094 FAM231AP0DMU4 169 aa6.3□□□□□ -1.4
CTNND1-225ENST00000530094 FAM231CP0DMU5 169 aa6.3□□□□□ -1.4
CTNND1-225ENST00000530094 ZNF80P51504 273 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-225ENST00000530094 FOXI1Q12951 378 aa6.3□□□□□ -1.4
CTNND1-225ENST00000530094 EIF4EBP1Q13541 118 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-225ENST00000530094 LINC00643Q86TS7 51 aa6.3□□□□□ -1.4
CTNND1-225ENST00000530094 LINC01006Q8NI28 216 aa6.3□□□□□ -1.4
CTNND1-225ENST00000530094 PLA2G2EQ9NZK7 142 aa6.3□□□□□ -1.4
CTNND1-225ENST00000530094 C20orf173Q96LM9 149 aa6.3□□□□□ -1.4
CTNND1-225ENST00000530094 PYGO1Q9Y3Y4 419 aa6.3□□□□□ -1.4
CTNND1-225ENST00000530094 DHRS4-AS1Q9P1J3 65 aa6.3□□□□□ -1.4
CTNND1-225ENST00000530094 SORL1Q92673 2214 aa6.3□□□□□ -1.4
CTNND1-225ENST00000530094 TMEM223A0PJW6 202 aa6.3□□□□□ -1.4
CTNND1-225ENST00000530094 LELP1Q5T871 98 aa6.3□□□□□ -1.4
CTNND1-225ENST00000530094 FAM236AA0A1B0GUQ0 79 aa6.29□□□□□ -1.4
CTNND1-225ENST00000530094 FAM236BA0A1B0GV22 79 aa6.29□□□□□ -1.4
CTNND1-225ENST00000530094 USP9YO00507 2555 aaPredicted RBP6.29□□□□□ -1.4
CTNND1-225ENST00000530094 NUPR1O60356 82 aa6.29□□□□□ -1.4
CTNND1-225ENST00000530094 PLXNB1O43157 2135 aa6.29□□□□□ -1.4
CTNND1-225ENST00000530094 PIK3CD-AS1Q5SR53 167 aa6.29□□□□□ -1.4
CTNND1-225ENST00000530094 TRBV6-5A0A0K0K1A5 114 aa6.29□□□□□ -1.4
CTNND1-225ENST00000530094 LOC107984640A0A0U1RRK4 108 aa6.29□□□□□ -1.4
CTNND1-225ENST00000530094 FAM110AQ9BQ89 295 aa6.29□□□□□ -1.4
CTNND1-225ENST00000530094 MLST8Q9BVC4 326 aa6.29□□□□□ -1.4
CTNND1-225ENST00000530094 MRGPRG-AS1Q2M3A8 158 aa6.28□□□□□ -1.4
CTNND1-225ENST00000530094 Q8N6K4 173 aa6.28□□□□□ -1.4
CTNND1-225ENST00000530094 TIMM17BO60830 172 aa6.28□□□□□ -1.4
CTNND1-225ENST00000530094 CEMP1Q6PRD7 247 aaPredicted RBP6.28□□□□□ -1.4
CTNND1-225ENST00000530094 IGLV4-69A0A075B6H9 119 aa6.28□□□□□ -1.4
CTNND1-225ENST00000530094 IGLV4-3A0A075B6K6 122 aa6.28□□□□□ -1.4
CTNND1-225ENST00000530094 CD164L2Q6UWJ8 174 aa6.28□□□□□ -1.4
CTNND1-225ENST00000530094 M0QY20 66 aa6.28□□□□□ -1.4
CTNND1-225ENST00000530094 J3KT08 172 aa6.28□□□□□ -1.4
CTNND1-225ENST00000530094 IGLV2-8P01709 118 aa6.28□□□□□ -1.4
CTNND1-225ENST00000530094 M0R378 163 aa6.27□□□□□ -1.41
CTNND1-225ENST00000530094 PRB2P02812 416 aaPredicted RBP6.27□□□□□ -1.41
CTNND1-225ENST00000530094 Q6ZS46 218 aa6.27□□□□□ -1.41
CTNND1-225ENST00000530094 NUPR2A6NF83 97 aa6.27□□□□□ -1.41
CTNND1-225ENST00000530094 BRWD1-AS2P59051 145 aa6.27□□□□□ -1.41
CTNND1-225ENST00000530094 U3KQK5 164 aa6.27□□□□□ -1.41
CTNND1-225ENST00000530094 FAM19A5Q7Z5A7 132 aaPredicted RBP6.27□□□□□ -1.41
CTNND1-225ENST00000530094 Q8N976 141 aa6.27□□□□□ -1.41
CTNND1-225ENST00000530094 USP17L23D6RBM5 183 aa6.26□□□□□ -1.41
CTNND1-225ENST00000530094 K7ERS5 55 aa6.26□□□□□ -1.41
CTNND1-225ENST00000530094 IGLV1-40P01703 118 aa6.26□□□□□ -1.41
CTNND1-225ENST00000530094 ZNF22P17026 224 aaPredicted RBP6.26□□□□□ -1.41
CTNND1-225ENST00000530094 COX17Q14061 63 aa6.26□□□□□ -1.41
CTNND1-225ENST00000530094 TNRC6BQ9UPQ9 1833 aaKnown RBP6.26□□□□□ -1.41
CTNND1-225ENST00000530094 TAX1BP3O14907 124 aa6.26□□□□□ -1.41
CTNND1-225ENST00000530094 LINC00482Q8N8I6 264 aa6.26□□□□□ -1.41
CTNND1-225ENST00000530094 TRAV23DV6A0A075B6W5 121 aa6.26□□□□□ -1.41
CTNND1-225ENST00000530094 MRPS36P82909 103 aaKnown RBP6.26□□□□□ -1.41
CTNND1-225ENST00000530094 KPRPQ5T749 579 aaPredicted RBP6.26□□□□□ -1.41
CTNND1-225ENST00000530094 CDKN2A-AS1Q9UH64 79 aa6.26□□□□□ -1.41
CTNND1-225ENST00000530094 IGKV2D-26A0A0A0MRZ7 120 aa6.26□□□□□ -1.41
CTNND1-225ENST00000530094 LINC00308Q8TCZ7 52 aa6.26□□□□□ -1.41
CTNND1-225ENST00000530094 TRBV27A0A0K0K1C4 114 aa6.25□□□□□ -1.41
CTNND1-225ENST00000530094 LRCOL1A6NCL2 159 aa6.25□□□□□ -1.41
CTNND1-225ENST00000530094 C18orf65Q6ZTR6 163 aa6.25□□□□□ -1.41
CTNND1-225ENST00000530094 WFDC2Q14508 124 aa6.25□□□□□ -1.41
CTNND1-225ENST00000530094 TANC2Q9HCD6 1990 aa6.25□□□□□ -1.41
CTNND1-225ENST00000530094 B5MCH6 92 aa6.24□□□□□ -1.41
CTNND1-225ENST00000530094 PRR15LQ9BU68 103 aa6.24□□□□□ -1.41
CTNND1-225ENST00000530094 CHCHD7Q9BUK0 85 aa6.24□□□□□ -1.41
CTNND1-225ENST00000530094 TTTY13Q9BZ97 58 aa6.24□□□□□ -1.41
CTNND1-225ENST00000530094 ADAMTS20P59510 1910 aa6.24□□□□□ -1.41
CTNND1-225ENST00000530094 RAI1Q7Z5J4 1906 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-225ENST00000530094 FN1P02751 2386 aaKnown RBP6.24□□□□□ -1.41
CTNND1-225ENST00000530094 RBX1P62877 108 aa6.24□□□□□ -1.41
CTNND1-225ENST00000530094 PTPRBP23467 1997 aa6.24□□□□□ -1.41
CTNND1-225ENST00000530094 SETD2Q9BYW2 2564 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-225ENST00000530094 TCL1BO95988 128 aa6.24□□□□□ -1.41
CTNND1-225ENST00000530094 TDRG1Q3Y452 100 aa6.24□□□□□ -1.41
CTNND1-225ENST00000530094 TRBV30A0A0K0K1B3 111 aa6.23□□□□□ -1.41
CTNND1-225ENST00000530094 SVIPQ8NHG7 77 aa6.23□□□□□ -1.41
CTNND1-225ENST00000530094 POLQO75417 2590 aa6.23□□□□□ -1.41
CTNND1-225ENST00000530094 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-225ENST00000530094 KLLNB2CW77 178 aa6.23□□□□□ -1.41
CTNND1-225ENST00000530094 C9orf85Q96MD7 179 aa6.23□□□□□ -1.41
CTNND1-225ENST00000530094 UBE2D4Q9Y2X8 147 aa6.23□□□□□ -1.41
CTNND1-225ENST00000530094 F8WDY8 70 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms