RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 CDIP1Q9H305 208 aa5.38□□□□□ -1.55
C11orf54-207ENST00000528288 GCN1Q92616 2671 aaKnown RBP5.37□□□□□ -1.55
C11orf54-207ENST00000528288 INSP01308 110 aa5.37□□□□□ -1.55
C11orf54-207ENST00000528288 MRPS36P82909 103 aaKnown RBP5.37□□□□□ -1.55
C11orf54-207ENST00000528288 C1orf158Q8N1D5 194 aa5.37□□□□□ -1.55
C11orf54-207ENST00000528288 C4orf3Q8WVX3 66 aa5.37□□□□□ -1.55
C11orf54-207ENST00000528288 LITAFQ99732 161 aa5.37□□□□□ -1.55
C11orf54-207ENST00000528288 SPATA25Q9BR10 227 aa5.37□□□□□ -1.55
C11orf54-207ENST00000528288 GAGE12JA6NER3 117 aa5.37□□□□□ -1.55
C11orf54-207ENST00000528288 SLC25A20O43772 301 aa5.37□□□□□ -1.55
C11orf54-207ENST00000528288 GAGE4Q13068 117 aa5.37□□□□□ -1.55
C11orf54-207ENST00000528288 GAGE5Q13069 117 aa5.37□□□□□ -1.55
C11orf54-207ENST00000528288 CLEC2BQ92478 149 aa5.37□□□□□ -1.55
C11orf54-207ENST00000528288 IGHV1-58A0A0C4DH39 117 aa5.37□□□□□ -1.55
C11orf54-207ENST00000528288 TRIAP1O43715 76 aa5.37□□□□□ -1.55
C11orf54-207ENST00000528288 ESM1Q9NQ30 184 aa5.37□□□□□ -1.55
C11orf54-207ENST00000528288 LOC100131303A0A0U1RQF7 123 aa5.36□□□□□ -1.55
C11orf54-207ENST00000528288 XGP55808 180 aa5.36□□□□□ -1.55
C11orf54-207ENST00000528288 RNF152Q8N8N0 203 aa5.36□□□□□ -1.55
C11orf54-207ENST00000528288 VSIG2Q96IQ7 327 aa5.36□□□□□ -1.55
C11orf54-207ENST00000528288 CITED2Q99967 270 aaPredicted RBP5.36□□□□□ -1.55
C11orf54-207ENST00000528288 NOP10Q9NPE3 64 aaKnown RBP5.36□□□□□ -1.55
C11orf54-207ENST00000528288 DNAJC9-AS1A6NH13 148 aa5.36□□□□□ -1.55
C11orf54-207ENST00000528288 TEN1Q86WV5 123 aa5.36□□□□□ -1.55
C11orf54-207ENST00000528288 NTN5Q8WTR8 489 aaPredicted RBP5.36□□□□□ -1.55
C11orf54-207ENST00000528288 PYGO1Q9Y3Y4 419 aa5.35□□□□□ -1.55
C11orf54-207ENST00000528288 HIVEP2P31629 2446 aa5.35□□□□□ -1.55
C11orf54-207ENST00000528288 CCL24O00175 119 aa5.35□□□□□ -1.55
C11orf54-207ENST00000528288 LYRM7Q5U5X0 104 aa5.35□□□□□ -1.55
C11orf54-207ENST00000528288 KRTAP1-3Q8IUG1 177 aa5.35□□□□□ -1.55
C11orf54-207ENST00000528288 PPDPFLQ8WWR9 84 aa5.35□□□□□ -1.55
C11orf54-207ENST00000528288 TMEM101Q96IK0 257 aa5.35□□□□□ -1.55
C11orf54-207ENST00000528288 TEX49A0A1B0GTD5 131 aa5.35□□□□□ -1.55
C11orf54-207ENST00000528288 TRBV20-1A0A075B6N2 111 aa5.34□□□□□ -1.55
C11orf54-207ENST00000528288 GAGE7O76087 117 aa5.34□□□□□ -1.55
C11orf54-207ENST00000528288 GAGE12FP0CL80 117 aa5.34□□□□□ -1.55
C11orf54-207ENST00000528288 GAGE12GP0CL81 117 aa5.34□□□□□ -1.55
C11orf54-207ENST00000528288 GAGE12IP0CL82 117 aa5.34□□□□□ -1.55
C11orf54-207ENST00000528288 Q9H8V8 135 aa5.34□□□□□ -1.55
C11orf54-207ENST00000528288 TINCRA0A1B0GVN0 87 aa5.34□□□□□ -1.55
C11orf54-207ENST00000528288 RS1O15537 224 aa5.34□□□□□ -1.55
C11orf54-207ENST00000528288 NTM-AS1Q6ZSK4 140 aa5.34□□□□□ -1.55
C11orf54-207ENST00000528288 FASNP49327 2511 aaKnown RBP5.34□□□□□ -1.55
C11orf54-207ENST00000528288 A0A0B4J2C4 111 aa5.33□□□□□ -1.56
C11orf54-207ENST00000528288 Q8N2B8 174 aa5.33□□□□□ -1.56
C11orf54-207ENST00000528288 SPANXA1Q9NS26 97 aa5.33□□□□□ -1.56
C11orf54-207ENST00000528288 RPL13AP40429 203 aaKnown RBP5.33□□□□□ -1.56
C11orf54-207ENST00000528288 LINC01620Q4KN68 170 aa5.33□□□□□ -1.56
C11orf54-207ENST00000528288 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.33□□□□□ -1.56
C11orf54-207ENST00000528288 A8MTW9 85 aa5.33□□□□□ -1.56
C11orf54-207ENST00000528288 LINC00242Q5T6M2 205 aa5.33□□□□□ -1.56
C11orf54-207ENST00000528288 ICOSQ9Y6W8 199 aa5.33□□□□□ -1.56
C11orf54-207ENST00000528288 HELZ2Q9BYK8 2649 aaKnown RBP5.33□□□□□ -1.56
C11orf54-207ENST00000528288 CKS1BP61024 79 aa5.33□□□□□ -1.56
C11orf54-207ENST00000528288 MIAQ16674 131 aa5.33□□□□□ -1.56
C11orf54-207ENST00000528288 TRGV2A0A075B6R0 118 aa5.32□□□□□ -1.56
C11orf54-207ENST00000528288 BEAN1Q3B7T3 259 aa5.32□□□□□ -1.56
C11orf54-207ENST00000528288 ATP6V0E2Q8NHE4 81 aa5.32□□□□□ -1.56
C11orf54-207ENST00000528288 VWFP04275 2813 aa5.32□□□□□ -1.56
C11orf54-207ENST00000528288 ATXN8Q156A1 80 aa5.32□□□□□ -1.56
C11orf54-207ENST00000528288 HECTD1Q9ULT8 2610 aa5.32□□□□□ -1.56
C11orf54-207ENST00000528288 CIDEAO60543 219 aa5.32□□□□□ -1.56
C11orf54-207ENST00000528288 MEIG1Q5JSS6 88 aa5.32□□□□□ -1.56
C11orf54-207ENST00000528288 YAE1D1Q9NRH1 226 aa5.32□□□□□ -1.56
C11orf54-207ENST00000528288 TOMM7Q9P0U1 55 aa5.32□□□□□ -1.56
C11orf54-207ENST00000528288 ANK3Q12955 4377 aaKnown RBP5.32□□□□□ -1.56
C11orf54-207ENST00000528288 CRYBA4P53673 196 aa5.31□□□□□ -1.56
C11orf54-207ENST00000528288 RPL36AP83881 106 aaKnown RBP5.31□□□□□ -1.56
C11orf54-207ENST00000528288 GAGE6Q13070 117 aa5.31□□□□□ -1.56
C11orf54-207ENST00000528288 ZFAND6Q6FIF0 208 aa5.31□□□□□ -1.56
C11orf54-207ENST00000528288 SBSPONQ8IVN8 264 aa5.31□□□□□ -1.56
C11orf54-207ENST00000528288 RPL36ALQ969Q0 106 aaKnown RBP5.31□□□□□ -1.56
C11orf54-207ENST00000528288 K7EQD1 137 aa5.31□□□□□ -1.56
C11orf54-207ENST00000528288 GIG44P09565 113 aaPredicted RBP5.31□□□□□ -1.56
C11orf54-207ENST00000528288 PIK3CD-AS1Q5SR53 167 aa5.31□□□□□ -1.56
C11orf54-207ENST00000528288 C2orf82Q6UX34 121 aa5.31□□□□□ -1.56
C11orf54-207ENST00000528288 SOSTDC1Q6X4U4 206 aa5.31□□□□□ -1.56
C11orf54-207ENST00000528288 CRLF1O75462 422 aa5.31□□□□□ -1.56
C11orf54-207ENST00000528288 SMR3AQ99954 134 aa5.31□□□□□ -1.56
C11orf54-207ENST00000528288 EDA2RQ9HAV5 297 aa5.31□□□□□ -1.56
C11orf54-207ENST00000528288 PRIMA1Q86XR5 153 aa5.3□□□□□ -1.56
C11orf54-207ENST00000528288 C11orf68Q9H3H3 251 aaKnown RBP5.3□□□□□ -1.56
C11orf54-207ENST00000528288 H7C423 109 aa5.3□□□□□ -1.56
C11orf54-207ENST00000528288 LINC01006Q8NI28 216 aa5.3□□□□□ -1.56
C11orf54-207ENST00000528288 DNAJC30Q96LL9 226 aa5.3□□□□□ -1.56
C11orf54-207ENST00000528288 PDZD2O15018 2839 aa5.3□□□□□ -1.56
C11orf54-207ENST00000528288 A0A096LPF7 62 aa5.3□□□□□ -1.56
C11orf54-207ENST00000528288 SMIM1B2RUZ4 78 aa5.3□□□□□ -1.56
C11orf54-207ENST00000528288 SPANXDQ9BXN6 97 aa5.3□□□□□ -1.56
C11orf54-207ENST00000528288 SPANXCQ9NY87 97 aa5.3□□□□□ -1.56
C11orf54-207ENST00000528288 TRBV30A0A0K0K1B3 111 aa5.29□□□□□ -1.56
C11orf54-207ENST00000528288 UBE2L6O14933 153 aa5.29□□□□□ -1.56
C11orf54-207ENST00000528288 DEFB130BP0DP73 79 aa5.29□□□□□ -1.56
C11orf54-207ENST00000528288 DEFB130AP0DP74 79 aa5.29□□□□□ -1.56
C11orf54-207ENST00000528288 LINC00308Q8TCZ7 52 aa5.29□□□□□ -1.56
C11orf54-207ENST00000528288 NDUFA1O15239 70 aa5.29□□□□□ -1.56
C11orf54-207ENST00000528288 TRGV4A0A0C4DH28 118 aa5.28□□□□□ -1.56
C11orf54-207ENST00000528288 CDC42SE2Q9NRR3 84 aa5.28□□□□□ -1.56
C11orf54-207ENST00000528288 TRAV4A0A0B4J268 109 aa5.28□□□□□ -1.56
C11orf54-207ENST00000528288 TRBV10-2A0A0K0K1G8 114 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms