RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 DAZ4Q86SG3 579 aaKnown RBP3.88□□□□□ -1.79
CHKA-204ENST00000528235 NFE4Q86UQ8 179 aa3.88□□□□□ -1.79
CHKA-204ENST00000528235 RNF182Q8N6D2 247 aa3.88□□□□□ -1.79
CHKA-204ENST00000528235 THAP8Q8NA92 274 aa3.88□□□□□ -1.79
CHKA-204ENST00000528235 Q9H8V8 135 aa3.88□□□□□ -1.79
CHKA-204ENST00000528235 DAZ3Q9NR90 486 aaKnown RBP3.88□□□□□ -1.79
CHKA-204ENST00000528235 CKLFQ9UBR5 152 aa3.88□□□□□ -1.79
CHKA-204ENST00000528235 IGHV1-58A0A0C4DH39 117 aa3.87□□□□□ -1.79
CHKA-204ENST00000528235 SMKR1H3BMG3 65 aa3.87□□□□□ -1.79
CHKA-204ENST00000528235 RPL27AP46776 148 aaKnown RBP3.87□□□□□ -1.79
CHKA-204ENST00000528235 SUB1P53999 127 aaKnown RBP eCLIP3.87□□□□□ -1.79
CHKA-204ENST00000528235 RPS11P62280 158 aaKnown RBP eCLIP3.87□□□□□ -1.79
CHKA-204ENST00000528235 RPL30P62888 115 aaKnown RBP3.87□□□□□ -1.79
CHKA-204ENST00000528235 C10orf55Q5SWW7 151 aa3.87□□□□□ -1.79
CHKA-204ENST00000528235 EBLN2Q6P2I7 272 aa3.87□□□□□ -1.79
CHKA-204ENST00000528235 C6orf201Q7Z4U5 140 aa3.87□□□□□ -1.79
CHKA-204ENST00000528235 CYYR1Q96J86 154 aa3.87□□□□□ -1.79
CHKA-204ENST00000528235 FAM19A4Q96LR4 140 aa3.87□□□□□ -1.79
CHKA-204ENST00000528235 IGF2BP2-AS1Q96M15 143 aa3.87□□□□□ -1.79
CHKA-204ENST00000528235 OTORQ9NRC9 128 aa3.87□□□□□ -1.79
CHKA-204ENST00000528235 TMEM14BQ9NUH8 114 aa3.87□□□□□ -1.79
CHKA-204ENST00000528235 CELA1Q9UNI1 258 aa3.87□□□□□ -1.79
CHKA-204ENST00000528235 WDR83OSQ9Y284 106 aa3.87□□□□□ -1.79
CHKA-204ENST00000528235 TRAV8-4A0A0B4J246 113 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 NBDYA0A0U1RRE5 68 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 SNURFLB1AK76 121 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 K7EMT4 169 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 NDUFA4O00483 81 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 VCYO14598 125 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 NDUFS5O43920 106 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 SAA1P0DJI8 122 aaPredicted RBP3.86□□□□□ -1.79
CHKA-204ENST00000528235 DUTP33316 252 aaKnown RBP3.86□□□□□ -1.79
CHKA-204ENST00000528235 DEFB131AP59861 70 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 DAD1P61803 113 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 UBE2L3P68036 154 aaKnown RBP3.86□□□□□ -1.79
CHKA-204ENST00000528235 TMEM170BQ5T4T1 132 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 ZNF493Q6ZR52 646 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 LINC00305Q7Z4B0 112 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 LYPD1Q8N2G4 141 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 PRR26Q8N8Z3 221 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 CHCHD5Q9BSY4 110 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 SLC25A2Q9BXI2 301 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 GNG13Q9P2W3 67 aa3.86□□□□□ -1.79
CHKA-204ENST00000528235 MYCBP2O75592 4640 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 IGLV11-55A0A075B6I3 123 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 IGHV3OR16-8A0A075B7F1 116 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 TRAV8-2A0A0B4J237 113 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 PLAC8L1A1L4L8 177 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 CEBPZOSA8MTT3 80 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 F2Z2F3 143 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 LEPROTL1O95214 131 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 SPART-AS1P0CW21 52 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 HTN3P15516 51 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 HIST1H4AP62805 103 aaKnown RBP3.85□□□□□ -1.79
CHKA-204ENST00000528235 LINC01561Q8N1V8 128 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 Q8N9P0 234 aaPredicted RBP3.85□□□□□ -1.79
CHKA-204ENST00000528235 NEXN-AS1Q8NBZ9 246 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 BRK1Q8WUW1 75 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 C2orf48Q96LS8 159 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 TRGV9Q99603 122 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 GFI1Q99684 422 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 CHAC1Q9BUX1 264 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 RHPN1-AS1Q9BWJ2 59 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 DPH3P1Q9H4G8 78 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 TIMM9Q9Y5J7 89 aa3.85□□□□□ -1.79
CHKA-204ENST00000528235 IGHV3-49A0A0A0MS15 119 aa3.84□□□□□ -1.79
CHKA-204ENST00000528235 TRBV6-6A0A0A6YYG2 114 aa3.84□□□□□ -1.79
CHKA-204ENST00000528235 IGHV7-4-1A0A0J9YVY3 117 aa3.84□□□□□ -1.79
CHKA-204ENST00000528235 LINC00473A8K010 186 aa3.84□□□□□ -1.79
CHKA-204ENST00000528235 C15orf62A8K5M9 175 aa3.84□□□□□ -1.79
CHKA-204ENST00000528235 E7EUB6 86 aa3.84□□□□□ -1.79
CHKA-204ENST00000528235 SYNGR2O43760 224 aa3.84□□□□□ -1.79
CHKA-204ENST00000528235 TCL1BO95988 128 aa3.84□□□□□ -1.79
CHKA-204ENST00000528235 LINC00643Q86TS7 51 aa3.84□□□□□ -1.79
CHKA-204ENST00000528235 SERP2Q8N6R1 65 aa3.84□□□□□ -1.79
CHKA-204ENST00000528235 ODF3Q96PU9 254 aa3.84□□□□□ -1.79
CHKA-204ENST00000528235 ANAPC10Q9UM13 185 aa3.84□□□□□ -1.79
CHKA-204ENST00000528235 IGHV3OR16-13A0A075B7E8 117 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 IGHV3-74A0A0B4J1X5 117 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 UBE2L5PA0A1B0GUS4 154 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 C9JCJ5 164 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 BCE1O60756 84 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 SMR3BP02814 79 aaPredicted RBP3.83□□□□□ -1.8
CHKA-204ENST00000528235 IL4P05112 153 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 ERCC8Q13216 396 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 KLK9Q2XQG4 91 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 Q6ZQT7 251 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 COX8CQ7Z4L0 72 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 ATP5L2Q7Z4Y8 100 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 C5orf38Q86SI9 138 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 TMEM167AQ8TBQ9 72 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 C17orf77Q96MU5 243 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 PAXXQ9BUH6 204 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 KLK9Q9UKQ9 250 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 VPS13BQ7Z7G8 4022 aa3.83□□□□□ -1.8
CHKA-204ENST00000528235 TRBV5-7A0A0A0MS05 114 aa3.82□□□□□ -1.8
CHKA-204ENST00000528235 TRAV8-1A0A0A6YYK1 113 aa3.82□□□□□ -1.8
CHKA-204ENST00000528235 IGHV3-21A0A0B4J1V1 117 aa3.82□□□□□ -1.8
CHKA-204ENST00000528235 IGKV1-6A0A0C4DH72 117 aa3.82□□□□□ -1.8
CHKA-204ENST00000528235 TRBV5-5A0A0J9YX44 114 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms