RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 K7EQG2 157 aa9.18□□□□□ -0.94
CAPN1-208ENST00000527323 GATA3P23771 443 aa9.18□□□□□ -0.94
CAPN1-208ENST00000527323 C2orf82Q6UX34 121 aa9.17□□□□□ -0.94
CAPN1-208ENST00000527323 DUX3Q96PT4 197 aa9.17□□□□□ -0.94
CAPN1-208ENST00000527323 TRAV8-4A0A0B4J246 113 aa9.17□□□□□ -0.94
CAPN1-208ENST00000527323 A8MZ25 164 aa9.17□□□□□ -0.94
CAPN1-208ENST00000527323 COX6CP09669 75 aa9.17□□□□□ -0.94
CAPN1-208ENST00000527323 DSCR9P59020 149 aa9.17□□□□□ -0.94
CAPN1-208ENST00000527323 TRBV10-2A0A0K0K1G8 114 aa9.16□□□□□ -0.94
CAPN1-208ENST00000527323 PRM2P04554 102 aa9.16□□□□□ -0.94
CAPN1-208ENST00000527323 CFHR3Q02985 330 aa9.16□□□□□ -0.94
CAPN1-208ENST00000527323 ADAMTSL4-AS1Q5T5F5 129 aa9.16□□□□□ -0.94
CAPN1-208ENST00000527323 TRRAPQ9Y4A5 3859 aa9.16□□□□□ -0.94
CAPN1-208ENST00000527323 TRAV4A0A0B4J268 109 aa9.16□□□□□ -0.94
CAPN1-208ENST00000527323 TRBV30A0A0K0K1B3 111 aa9.16□□□□□ -0.94
CAPN1-208ENST00000527323 PSMB8P28062 276 aa9.16□□□□□ -0.94
CAPN1-208ENST00000527323 TTC32Q5I0X7 151 aa9.16□□□□□ -0.94
CAPN1-208ENST00000527323 IGHV1-58A0A0C4DH39 117 aa9.15□□□□□ -0.94
CAPN1-208ENST00000527323 Q6ZSV7 163 aa9.15□□□□□ -0.94
CAPN1-208ENST00000527323 ICOSQ9Y6W8 199 aa9.15□□□□□ -0.94
CAPN1-208ENST00000527323 H3BMM0 161 aa9.15□□□□□ -0.95
CAPN1-208ENST00000527323 M0QXV9 152 aa9.15□□□□□ -0.95
CAPN1-208ENST00000527323 KHDC1LQ5JSQ8 128 aa9.15□□□□□ -0.95
CAPN1-208ENST00000527323 UBE2WQ96B02 151 aa9.15□□□□□ -0.95
CAPN1-208ENST00000527323 CRLF1O75462 422 aa9.14□□□□□ -0.95
CAPN1-208ENST00000527323 MRPS36P82909 103 aaKnown RBP9.14□□□□□ -0.95
CAPN1-208ENST00000527323 PYGO1Q9Y3Y4 419 aa9.14□□□□□ -0.95
CAPN1-208ENST00000527323 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.14□□□□□ -0.95
CAPN1-208ENST00000527323 IGKV2-29A2NJV5 120 aaPredicted RBP9.14□□□□□ -0.95
CAPN1-208ENST00000527323 Q9UF83 564 aa9.13□□□□□ -0.95
CAPN1-208ENST00000527323 COL6A5A8TX70 2615 aa9.13□□□□□ -0.95
CAPN1-208ENST00000527323 IGHV3-38A0A0C4DH36 116 aa9.13□□□□□ -0.95
CAPN1-208ENST00000527323 GAGE5Q13069 117 aa9.13□□□□□ -0.95
CAPN1-208ENST00000527323 GAGE6Q13070 117 aa9.13□□□□□ -0.95
CAPN1-208ENST00000527323 DEFB136Q30KP8 78 aa9.13□□□□□ -0.95
CAPN1-208ENST00000527323 C18orf65Q6ZTR6 163 aa9.13□□□□□ -0.95
CAPN1-208ENST00000527323 CLEC2BQ92478 149 aa9.13□□□□□ -0.95
CAPN1-208ENST00000527323 LITAFQ99732 161 aa9.13□□□□□ -0.95
CAPN1-208ENST00000527323 SS18L2Q9UHA2 77 aa9.13□□□□□ -0.95
CAPN1-208ENST00000527323 B5MCH6 92 aa9.13□□□□□ -0.95
CAPN1-208ENST00000527323 DAND5Q8N907 189 aa9.13□□□□□ -0.95
CAPN1-208ENST00000527323 C15orf53Q8NAA6 179 aa9.13□□□□□ -0.95
CAPN1-208ENST00000527323 DEFB131AP59861 70 aa9.12□□□□□ -0.95
CAPN1-208ENST00000527323 VSIG2Q96IQ7 327 aa9.12□□□□□ -0.95
CAPN1-208ENST00000527323 RBMY1A1P0DJD3 496 aaKnown RBP9.12□□□□□ -0.95
CAPN1-208ENST00000527323 RBMY1CP0DJD4 496 aa9.12□□□□□ -0.95
CAPN1-208ENST00000527323 RBMY1FQ15415 496 aaKnown RBP9.12□□□□□ -0.95
CAPN1-208ENST00000527323 MIAQ16674 131 aa9.12□□□□□ -0.95
CAPN1-208ENST00000527323 NBEAL2Q6ZNJ1 2754 aa9.12□□□□□ -0.95
CAPN1-208ENST00000527323 H7C423 109 aa9.11□□□□□ -0.95
CAPN1-208ENST00000527323 DGAT2L7PQ6IED9 249 aa9.11□□□□□ -0.95
CAPN1-208ENST00000527323 NDUFV3P56181 108 aaKnown RBP9.11□□□□□ -0.95
CAPN1-208ENST00000527323 KRTAP1-1Q07627 177 aa9.11□□□□□ -0.95
CAPN1-208ENST00000527323 FAM104AQ969W3 186 aa9.11□□□□□ -0.95
CAPN1-208ENST00000527323 ESM1Q9NQ30 184 aa9.11□□□□□ -0.95
CAPN1-208ENST00000527323 A0A0U1RRA0 63 aa9.11□□□□□ -0.95
CAPN1-208ENST00000527323 IFITM1P13164 125 aa9.11□□□□□ -0.95
CAPN1-208ENST00000527323 HOXD3P31249 432 aaPredicted RBP9.11□□□□□ -0.95
CAPN1-208ENST00000527323 RPL13AP40429 203 aaKnown RBP9.11□□□□□ -0.95
CAPN1-208ENST00000527323 SPANXDQ9BXN6 97 aa9.11□□□□□ -0.95
CAPN1-208ENST00000527323 SPANXCQ9NY87 97 aa9.11□□□□□ -0.95
CAPN1-208ENST00000527323 TINCRA0A1B0GVN0 87 aa9.1□□□□□ -0.95
CAPN1-208ENST00000527323 INAFM1C9JVW0 142 aa9.1□□□□□ -0.95
CAPN1-208ENST00000527323 Q6ZSN1 163 aa9.1□□□□□ -0.95
CAPN1-208ENST00000527323 LINC00467Q9BRT7 94 aa9.09□□□□□ -0.95
CAPN1-208ENST00000527323 SPANXA1Q9NS26 97 aa9.09□□□□□ -0.95
CAPN1-208ENST00000527323 NACAE9PAV3 2078 aa9.09□□□□□ -0.95
CAPN1-208ENST00000527323 LY6G6DO95868 133 aa9.09□□□□□ -0.95
CAPN1-208ENST00000527323 NHLRC4P0CG21 123 aaPredicted RBP9.09□□□□□ -0.95
CAPN1-208ENST00000527323 ZNF625Q96I27 306 aaPredicted RBP9.09□□□□□ -0.95
CAPN1-208ENST00000527323 LINC01587Q99440 93 aa9.09□□□□□ -0.95
CAPN1-208ENST00000527323 CHCHD7Q9BUK0 85 aa9.09□□□□□ -0.95
CAPN1-208ENST00000527323 UBE2D4Q9Y2X8 147 aa9.09□□□□□ -0.95
CAPN1-208ENST00000527323 TIRAPP58753 221 aa9.08□□□□□ -0.96
CAPN1-208ENST00000527323 LRRC75A-AS1Q8N1F1 130 aa9.08□□□□□ -0.96
CAPN1-208ENST00000527323 CDKN2A-AS1Q9UH64 79 aa9.08□□□□□ -0.96
CAPN1-208ENST00000527323 FBN1P35555 2871 aaKnown RBP9.08□□□□□ -0.96
CAPN1-208ENST00000527323 CIRBPQ14011 172 aaKnown RBP9.08□□□□□ -0.96
CAPN1-208ENST00000527323 TMEM61Q8N0U2 210 aa9.08□□□□□ -0.96
CAPN1-208ENST00000527323 H3BT86 120 aa9.08□□□□□ -0.96
CAPN1-208ENST00000527323 GAGE12JA6NER3 117 aa9.07□□□□□ -0.96
CAPN1-208ENST00000527323 GAGE7O76087 117 aa9.07□□□□□ -0.96
CAPN1-208ENST00000527323 GAGE12FP0CL80 117 aa9.07□□□□□ -0.96
CAPN1-208ENST00000527323 GAGE12GP0CL81 117 aa9.07□□□□□ -0.96
CAPN1-208ENST00000527323 GAGE12IP0CL82 117 aa9.07□□□□□ -0.96
CAPN1-208ENST00000527323 ZNF415Q09FC8 603 aa9.07□□□□□ -0.96
CAPN1-208ENST00000527323 GAGE4Q13068 117 aa9.07□□□□□ -0.96
CAPN1-208ENST00000527323 LST1O00453 97 aa9.06□□□□□ -0.96
CAPN1-208ENST00000527323 SLURP1P55000 103 aa9.06□□□□□ -0.96
CAPN1-208ENST00000527323 Q6YL49 198 aa9.06□□□□□ -0.96
CAPN1-208ENST00000527323 PKD1L1Q8TDX9 2849 aa9.06□□□□□ -0.96
CAPN1-208ENST00000527323 CCDC179H3BU77 68 aa9.06□□□□□ -0.96
CAPN1-208ENST00000527323 VPREB3Q9UKI3 123 aa9.06□□□□□ -0.96
CAPN1-208ENST00000527323 TMEM89A2RUT3 159 aa9.05□□□□□ -0.96
CAPN1-208ENST00000527323 DNAJC9-AS1A6NH13 148 aa9.05□□□□□ -0.96
CAPN1-208ENST00000527323 TMEM101Q96IK0 257 aa9.05□□□□□ -0.96
CAPN1-208ENST00000527323 EDA2RQ9HAV5 297 aa9.05□□□□□ -0.96
CAPN1-208ENST00000527323 Q9H8V8 135 aa9.04□□□□□ -0.96
CAPN1-208ENST00000527323 RBMY1BA6NDE4 496 aaKnown RBP9.04□□□□□ -0.96
CAPN1-208ENST00000527323 RBMY1EA6NEQ0 496 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms