RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 DGAT2L7PQ6IED9 249 aa9.24□□□□□ -0.93
CD44-224ENST00000526669 Q6ZUT4 128 aa9.24□□□□□ -0.93
CD44-224ENST00000526669 LINC00269Q8N2A0 174 aa9.24□□□□□ -0.93
CD44-224ENST00000526669 OR5A1Q8NGJ0 315 aa9.24□□□□□ -0.93
CD44-224ENST00000526669 IBA57-AS1B1ANH7 110 aa9.23□□□□□ -0.93
CD44-224ENST00000526669 CRPP02741 224 aa9.23□□□□□ -0.93
CD44-224ENST00000526669 ZNF25P17030 456 aaPredicted RBP9.23□□□□□ -0.93
CD44-224ENST00000526669 MRPL52Q86TS9 123 aaKnown RBP9.23□□□□□ -0.93
CD44-224ENST00000526669 A0A096LNJ9 63 aa9.22□□□□□ -0.93
CD44-224ENST00000526669 NUPR1O60356 82 aa9.22□□□□□ -0.93
CD44-224ENST00000526669 ENHOQ6UWT2 76 aa9.22□□□□□ -0.93
CD44-224ENST00000526669 TOMM6Q96B49 74 aa9.22□□□□□ -0.93
CD44-224ENST00000526669 TIMM21Q9BVV7 248 aa9.22□□□□□ -0.93
CD44-224ENST00000526669 SPANXA1Q9NS26 97 aa9.22□□□□□ -0.93
CD44-224ENST00000526669 HSBP1O75506 76 aa9.21□□□□□ -0.94
CD44-224ENST00000526669 HBDP02042 147 aa9.21□□□□□ -0.94
CD44-224ENST00000526669 REG3AQ06141 175 aa9.21□□□□□ -0.94
CD44-224ENST00000526669 SMAGPQ0VAQ4 97 aa9.21□□□□□ -0.94
CD44-224ENST00000526669 ZC2HC1BQ5TFG8 222 aa9.21□□□□□ -0.94
CD44-224ENST00000526669 FAM19A2Q8N3H0 131 aa9.21□□□□□ -0.94
CD44-224ENST00000526669 ZNF664Q8N3J9 261 aa9.21□□□□□ -0.94
CD44-224ENST00000526669 CHCHD1Q96BP2 118 aaKnown RBP9.21□□□□□ -0.94
CD44-224ENST00000526669 CDC42SE2Q9NRR3 84 aa9.21□□□□□ -0.94
CD44-224ENST00000526669 RYR3Q15413 4870 aa9.21□□□□□ -0.94
CD44-224ENST00000526669 IGLV10-54A0A075B6I4 117 aa9.2□□□□□ -0.94
CD44-224ENST00000526669 IGLV4-3A0A075B6K6 122 aa9.2□□□□□ -0.94
CD44-224ENST00000526669 NDUFA6P56556 154 aa9.2□□□□□ -0.94
CD44-224ENST00000526669 C1orf134Q5TEV5 83 aa9.2□□□□□ -0.94
CD44-224ENST00000526669 C6orf223Q8N319 242 aa9.2□□□□□ -0.94
CD44-224ENST00000526669 FAM104AQ969W3 186 aa9.2□□□□□ -0.94
CD44-224ENST00000526669 SCGB3A1Q96QR1 104 aa9.2□□□□□ -0.94
CD44-224ENST00000526669 IGKV2D-24A0A075B6R9 120 aa9.19□□□□□ -0.94
CD44-224ENST00000526669 K7EP13 123 aa9.19□□□□□ -0.94
CD44-224ENST00000526669 G0S2P27469 103 aa9.19□□□□□ -0.94
CD44-224ENST00000526669 FAT2Q9NYQ8 4349 aa9.18□□□□□ -0.94
CD44-224ENST00000526669 TRAV8-3A0A0A6YYJ7 113 aa9.18□□□□□ -0.94
CD44-224ENST00000526669 IGIPA6NJ69 53 aa9.18□□□□□ -0.94
CD44-224ENST00000526669 PRR34Q9NV39 138 aa9.18□□□□□ -0.94
CD44-224ENST00000526669 PYGO1Q9Y3Y4 419 aa9.18□□□□□ -0.94
CD44-224ENST00000526669 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
CD44-224ENST00000526669 MRPS36P82909 103 aaKnown RBP9.17□□□□□ -0.94
CD44-224ENST00000526669 PDZD11Q5EBL8 140 aa9.17□□□□□ -0.94
CD44-224ENST00000526669 TMEM141Q96I45 108 aa9.17□□□□□ -0.94
CD44-224ENST00000526669 TIMM17AQ99595 171 aa9.17□□□□□ -0.94
CD44-224ENST00000526669 TRAV13-1A0A0B4J241 112 aa9.16□□□□□ -0.94
CD44-224ENST00000526669 IFITM10A6NMD0 228 aa9.16□□□□□ -0.94
CD44-224ENST00000526669 MIAQ16674 131 aa9.16□□□□□ -0.94
CD44-224ENST00000526669 LINC00173Q6ZV60 143 aa9.16□□□□□ -0.94
CD44-224ENST00000526669 ERASQ7Z444 233 aa9.16□□□□□ -0.94
CD44-224ENST00000526669 C1orf43Q9BWL3 253 aa9.16□□□□□ -0.94
CD44-224ENST00000526669 DNAH11Q96DT5 4516 aa9.16□□□□□ -0.94
CD44-224ENST00000526669 LINC00959A0A1B0GUT2 108 aa9.15□□□□□ -0.94
CD44-224ENST00000526669 RTL8CO15255 209 aa9.15□□□□□ -0.94
CD44-224ENST00000526669 FABP4P15090 132 aa9.15□□□□□ -0.94
CD44-224ENST00000526669 Q6ZN92 141 aa9.15□□□□□ -0.94
CD44-224ENST00000526669 TEX43Q6ZNM6 134 aa9.15□□□□□ -0.94
CD44-224ENST00000526669 Q6ZRN7 208 aaPredicted RBP9.15□□□□□ -0.94
CD44-224ENST00000526669 NFE4Q86UQ8 179 aa9.15□□□□□ -0.94
CD44-224ENST00000526669 RMI2Q96E14 147 aa9.15□□□□□ -0.94
CD44-224ENST00000526669 LINC01549A6NIU2 74 aa9.14□□□□□ -0.95
CD44-224ENST00000526669 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.14□□□□□ -0.95
CD44-224ENST00000526669 PSCAO43653 123 aa9.14□□□□□ -0.95
CD44-224ENST00000526669 BAALCQ8WXS3 180 aa9.14□□□□□ -0.95
CD44-224ENST00000526669 CHCHD10Q8WYQ3 142 aaPredicted RBP9.14□□□□□ -0.95
CD44-224ENST00000526669 VCX2Q9H322 139 aa9.14□□□□□ -0.95
CD44-224ENST00000526669 GAGE12HA6NDE8 117 aa9.13□□□□□ -0.95
CD44-224ENST00000526669 CCL25O15444 150 aa9.13□□□□□ -0.95
CD44-224ENST00000526669 XCL1P47992 114 aa9.13□□□□□ -0.95
CD44-224ENST00000526669 SS18Q15532 418 aa9.13□□□□□ -0.95
CD44-224ENST00000526669 AMELXQ99217 191 aa9.13□□□□□ -0.95
CD44-224ENST00000526669 C2orf88Q9BSF0 95 aa9.13□□□□□ -0.95
CD44-224ENST00000526669 TM2D2Q9BX73 214 aa9.13□□□□□ -0.95
CD44-224ENST00000526669 HECTD4Q9Y4D8 3996 aa9.13□□□□□ -0.95
CD44-224ENST00000526669 TRAV8-4A0A0B4J246 113 aa9.12□□□□□ -0.95
CD44-224ENST00000526669 PRSS29PA6NIE9 313 aa9.12□□□□□ -0.95
CD44-224ENST00000526669 ATP5LO75964 103 aa9.12□□□□□ -0.95
CD44-224ENST00000526669 LEPROTL1O95214 131 aa9.12□□□□□ -0.95
CD44-224ENST00000526669 COA6Q5JTJ3 125 aaKnown RBP9.12□□□□□ -0.95
CD44-224ENST00000526669 KRTAP26-1Q6PEX3 210 aa9.12□□□□□ -0.95
CD44-224ENST00000526669 IFI27L1Q96BM0 104 aa9.12□□□□□ -0.95
CD44-224ENST00000526669 H0Y8G0 127 aa9.11□□□□□ -0.95
CD44-224ENST00000526669 LECT2O14960 151 aa9.11□□□□□ -0.95
CD44-224ENST00000526669 NPSP0C0P6 89 aa9.11□□□□□ -0.95
CD44-224ENST00000526669 TNP2Q05952 138 aa9.11□□□□□ -0.95
CD44-224ENST00000526669 PAPPA-AS1Q5QFB9 102 aa9.11□□□□□ -0.95
CD44-224ENST00000526669 MAPKAPK5-AS1Q8N8E1 139 aa9.11□□□□□ -0.95
CD44-224ENST00000526669 PKD1P98161 4303 aa9.1□□□□□ -0.95
CD44-224ENST00000526669 S100A6P06703 90 aa9.1□□□□□ -0.95
CD44-224ENST00000526669 UBE2D1P51668 147 aa9.1□□□□□ -0.95
CD44-224ENST00000526669 WFDC2Q14508 124 aa9.1□□□□□ -0.95
CD44-224ENST00000526669 PMVKQ15126 192 aa9.1□□□□□ -0.95
CD44-224ENST00000526669 TMA7Q9Y2S6 64 aaKnown RBP9.1□□□□□ -0.95
CD44-224ENST00000526669 A0A0J9YXV3 536 aa9.09□□□□□ -0.95
CD44-224ENST00000526669 PRSS1P07477 247 aa9.09□□□□□ -0.95
CD44-224ENST00000526669 COX6A2Q02221 97 aa9.09□□□□□ -0.95
CD44-224ENST00000526669 FOXI1Q12951 378 aa9.09□□□□□ -0.95
CD44-224ENST00000526669 CST9LQ9H4G1 147 aa9.09□□□□□ -0.95
CD44-224ENST00000526669 COX11Q9Y6N1 276 aa9.09□□□□□ -0.95
CD44-224ENST00000526669 LINC00242Q5T6M2 205 aa9.08□□□□□ -0.96
CD44-224ENST00000526669 C5orf38Q86SI9 138 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms