RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 C7orf77A4D0Y5 90 aa11.9□□□□□ -0.5
CAPN1-203ENST00000525013 PANO1I0J062 215 aa11.9□□□□□ -0.5
CAPN1-203ENST00000525013 PPP1R17O96001 155 aa11.9□□□□□ -0.5
CAPN1-203ENST00000525013 FCER1GP30273 86 aa11.9□□□□□ -0.5
CAPN1-203ENST00000525013 HIGD2BQ4VC39 106 aa11.9□□□□□ -0.5
CAPN1-203ENST00000525013 XCL1P47992 114 aa11.89□□□□□ -0.51
CAPN1-203ENST00000525013 NRACQ8N912 160 aa11.89□□□□□ -0.51
CAPN1-203ENST00000525013 RPL37AP61513 92 aaKnown RBP11.88□□□□□ -0.51
CAPN1-203ENST00000525013 SUMO2P61956 95 aaKnown RBP11.88□□□□□ -0.51
CAPN1-203ENST00000525013 MRPL51Q4U2R6 128 aaKnown RBP11.88□□□□□ -0.51
CAPN1-203ENST00000525013 FAM104BQ5XKR9 115 aa11.88□□□□□ -0.51
CAPN1-203ENST00000525013 LINC00959A0A1B0GUT2 108 aa11.87□□□□□ -0.51
CAPN1-203ENST00000525013 CCL25O15444 150 aa11.87□□□□□ -0.51
CAPN1-203ENST00000525013 KRTAP10-4P60372 401 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-203ENST00000525013 FOXI1Q12951 378 aa11.87□□□□□ -0.51
CAPN1-203ENST00000525013 MRPL52Q86TS9 123 aaKnown RBP11.87□□□□□ -0.51
CAPN1-203ENST00000525013 KIR2DL4Q99706 377 aa11.87□□□□□ -0.51
CAPN1-203ENST00000525013 A0A1B0GW15 77 aa11.86□□□□□ -0.51
CAPN1-203ENST00000525013 CHTF8P0CG12 524 aa11.86□□□□□ -0.51
CAPN1-203ENST00000525013 SS18Q15532 418 aa11.86□□□□□ -0.51
CAPN1-203ENST00000525013 ZNF664Q8N3J9 261 aa11.86□□□□□ -0.51
CAPN1-203ENST00000525013 CDC42SE2Q9NRR3 84 aa11.86□□□□□ -0.51
CAPN1-203ENST00000525013 PPP1R2P9O14990 202 aa11.85□□□□□ -0.51
CAPN1-203ENST00000525013 CKS2P33552 79 aa11.85□□□□□ -0.51
CAPN1-203ENST00000525013 MRPL54Q6P161 138 aaKnown RBP11.85□□□□□ -0.51
CAPN1-203ENST00000525013 GVQW2A0A096LPI5 108 aaPredicted RBP11.84□□□□□ -0.51
CAPN1-203ENST00000525013 LINC00862A6NCI5 91 aa11.84□□□□□ -0.51
CAPN1-203ENST00000525013 SMAGPQ0VAQ4 97 aa11.84□□□□□ -0.51
CAPN1-203ENST00000525013 S100A8P05109 93 aa11.83□□□□□ -0.52
CAPN1-203ENST00000525013 HBBP68871 147 aa11.83□□□□□ -0.52
CAPN1-203ENST00000525013 COX6A2Q02221 97 aa11.83□□□□□ -0.52
CAPN1-203ENST00000525013 CIRBPQ14011 172 aaKnown RBP11.83□□□□□ -0.52
CAPN1-203ENST00000525013 KRTAP29-1A8MX34 341 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-203ENST00000525013 F8W036 122 aa11.82□□□□□ -0.52
CAPN1-203ENST00000525013 CD164L2Q6UWJ8 174 aa11.82□□□□□ -0.52
CAPN1-203ENST00000525013 C20orf78Q9BR46 151 aa11.82□□□□□ -0.52
CAPN1-203ENST00000525013 A0A087WYN8 130 aa11.81□□□□□ -0.52
CAPN1-203ENST00000525013 IGHV1-58A0A0C4DH39 117 aa11.81□□□□□ -0.52
CAPN1-203ENST00000525013 TNFRSF6BO95407 300 aa11.81□□□□□ -0.52
CAPN1-203ENST00000525013 RNASE13Q5GAN3 156 aaKnown RBP11.81□□□□□ -0.52
CAPN1-203ENST00000525013 PRSS3P2Q8NHM4 247 aa11.81□□□□□ -0.52
CAPN1-203ENST00000525013 SPACA4Q8TDM5 124 aa11.81□□□□□ -0.52
CAPN1-203ENST00000525013 LINC00526Q96FQ7 95 aa11.81□□□□□ -0.52
CAPN1-203ENST00000525013 UBE2D4Q9Y2X8 147 aa11.81□□□□□ -0.52
CAPN1-203ENST00000525013 IGKV2-24A0A0C4DH68 120 aa11.8□□□□□ -0.52
CAPN1-203ENST00000525013 D6R8Y8 96 aa11.8□□□□□ -0.52
CAPN1-203ENST00000525013 RAB14P61106 215 aa11.8□□□□□ -0.52
CAPN1-203ENST00000525013 TMEM18Q96B42 140 aa11.8□□□□□ -0.52
CAPN1-203ENST00000525013 CSDC2Q9Y534 153 aaKnown RBP11.8□□□□□ -0.52
CAPN1-203ENST00000525013 TRBV24-1A0A075B6N3 115 aa11.79□□□□□ -0.52
CAPN1-203ENST00000525013 C1orf196B1AJZ1 125 aa11.79□□□□□ -0.52
CAPN1-203ENST00000525013 TRAV13-1A0A0B4J241 112 aa11.78□□□□□ -0.52
CAPN1-203ENST00000525013 A0A1B0GXF2 115 aa11.78□□□□□ -0.52
CAPN1-203ENST00000525013 ZNF561-AS1K7EIQ3 104 aa11.78□□□□□ -0.52
CAPN1-203ENST00000525013 RPL32P62910 135 aaKnown RBP11.78□□□□□ -0.52
CAPN1-203ENST00000525013 MAJINQ3KP22 176 aa11.78□□□□□ -0.52
CAPN1-203ENST00000525013 TCAPO15273 167 aa11.77□□□□□ -0.53
CAPN1-203ENST00000525013 NPYP01303 97 aa11.77□□□□□ -0.53
CAPN1-203ENST00000525013 MALP21145 153 aa11.77□□□□□ -0.53
CAPN1-203ENST00000525013 Q6ZUT4 128 aa11.77□□□□□ -0.53
CAPN1-203ENST00000525013 SMIM2Q9BVW6 85 aa11.77□□□□□ -0.53
CAPN1-203ENST00000525013 COX7A2LO14548 114 aa11.76□□□□□ -0.53
CAPN1-203ENST00000525013 PPBPP02775 128 aa11.76□□□□□ -0.53
CAPN1-203ENST00000525013 HNRNPA3P51991 378 aaKnown RBP11.76□□□□□ -0.53
CAPN1-203ENST00000525013 RPL39P62891 51 aaKnown RBP11.76□□□□□ -0.53
CAPN1-203ENST00000525013 CARD19Q96LW7 228 aa11.76□□□□□ -0.53
CAPN1-203ENST00000525013 TIMM21Q9BVV7 248 aa11.76□□□□□ -0.53
CAPN1-203ENST00000525013 PLAC8Q9NZF1 115 aa11.76□□□□□ -0.53
CAPN1-203ENST00000525013 OXTP01178 125 aa11.75□□□□□ -0.53
CAPN1-203ENST00000525013 ATP5L2Q7Z4Y8 100 aa11.75□□□□□ -0.53
CAPN1-203ENST00000525013 LRP1Q07954 4544 aaKnown RBP11.75□□□□□ -0.53
CAPN1-203ENST00000525013 A0A096LNI7 61 aa11.74□□□□□ -0.53
CAPN1-203ENST00000525013 PHOX2AO14813 284 aa11.74□□□□□ -0.53
CAPN1-203ENST00000525013 SYCNQ0VAF6 134 aa11.74□□□□□ -0.53
CAPN1-203ENST00000525013 ORMDL3Q8N138 153 aa11.74□□□□□ -0.53
CAPN1-203ENST00000525013 PKHD1L1Q86WI1 4243 aa11.74□□□□□ -0.53
CAPN1-203ENST00000525013 MT-ND4LP03901 98 aa11.73□□□□□ -0.53
CAPN1-203ENST00000525013 PNRC1Q12796 327 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-203ENST00000525013 TMEM136Q6ZRR5 245 aa11.73□□□□□ -0.53
CAPN1-203ENST00000525013 C5orf38Q86SI9 138 aa11.73□□□□□ -0.53
CAPN1-203ENST00000525013 STPG4Q8N801 248 aa11.73□□□□□ -0.53
CAPN1-203ENST00000525013 C7orf33Q8WU49 177 aa11.73□□□□□ -0.53
CAPN1-203ENST00000525013 PRELID3AQ96N28 172 aa11.73□□□□□ -0.53
CAPN1-203ENST00000525013 PKIGQ9Y2B9 76 aa11.73□□□□□ -0.53
CAPN1-203ENST00000525013 IGLV4-69A0A075B6H9 119 aa11.71□□□□□ -0.53
CAPN1-203ENST00000525013 RAB5AP20339 215 aa11.71□□□□□ -0.53
CAPN1-203ENST00000525013 ANAPC16Q96DE5 110 aa11.71□□□□□ -0.53
CAPN1-203ENST00000525013 OPRPNQ99935 248 aaPredicted RBP11.71□□□□□ -0.53
CAPN1-203ENST00000525013 SPANXA1Q9NS26 97 aa11.71□□□□□ -0.53
CAPN1-203ENST00000525013 LINC00474Q9P2X8 69 aa11.71□□□□□ -0.53
CAPN1-203ENST00000525013 APOMO95445 188 aa11.69□□□□□ -0.54
CAPN1-203ENST00000525013 CAMK2N2Q96S95 79 aa11.69□□□□□ -0.54
CAPN1-203ENST00000525013 FAT3Q8TDW7 4589 aa11.69□□□□□ -0.54
CAPN1-203ENST00000525013 LOC389332A0A1B0GUA5 103 aa11.68□□□□□ -0.54
CAPN1-203ENST00000525013 Q6ZRU5 148 aa11.68□□□□□ -0.54
CAPN1-203ENST00000525013 FAM104AQ969W3 186 aa11.68□□□□□ -0.54
CAPN1-203ENST00000525013 IFITM10A6NMD0 228 aa11.67□□□□□ -0.54
CAPN1-203ENST00000525013 MRPS36P82909 103 aaKnown RBP11.67□□□□□ -0.54
CAPN1-203ENST00000525013 CLLU1Q5K131 121 aa11.67□□□□□ -0.54
CAPN1-203ENST00000525013 LOC107984640A0A0U1RRK4 108 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms