RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 CCL8P80075 99 aa3.03□□□□□ -1.92
SKP1-213ENST00000524288 BSPH1Q075Z2 132 aa3.03□□□□□ -1.92
SKP1-213ENST00000524288 TTC9CQ8N5M4 171 aa3.03□□□□□ -1.92
SKP1-213ENST00000524288 OR11H6Q8NGC7 330 aa3.03□□□□□ -1.92
SKP1-213ENST00000524288 RNASE6Q93091 150 aaKnown RBP3.03□□□□□ -1.92
SKP1-213ENST00000524288 LINC01600Q96MT4 127 aa3.03□□□□□ -1.92
SKP1-213ENST00000524288 SIGMAR1Q99720 223 aa3.03□□□□□ -1.92
SKP1-213ENST00000524288 SLC50A1Q9BRV3 221 aa3.03□□□□□ -1.92
SKP1-213ENST00000524288 LENEPQ9Y5L5 61 aa3.03□□□□□ -1.92
SKP1-213ENST00000524288 ARHGAP32A7KAX9 2087 aa3.03□□□□□ -1.92
SKP1-213ENST00000524288 ICE1Q9Y2F5 2266 aa3.03□□□□□ -1.92
SKP1-213ENST00000524288 VCANP13611 3396 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 IGKV2-40A0A087WW87 121 aaPredicted RBP3.02□□□□□ -1.93
SKP1-213ENST00000524288 A0A1W2PNN7 141 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 LINC01549A6NIU2 74 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 FABP5P3A8MUU1 101 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 F8VRH5 84 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 H3BMG7 143 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 M0R1W7 72 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 M0R381 172 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 GNG7O60262 68 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 IGKV2D-40P01614 121 aaPredicted RBP3.02□□□□□ -1.93
SKP1-213ENST00000524288 UBE2D1P51668 147 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 KLRD1Q13241 179 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 C12orf74Q32Q52 190 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 SBSPONQ8IVN8 264 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 RAB37Q96AX2 223 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 NAA38Q9BRA0 125 aaKnown RBP3.02□□□□□ -1.93
SKP1-213ENST00000524288 SMIM2Q9BVW6 85 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 NHP2Q9NX24 153 aaKnown RBP3.02□□□□□ -1.93
SKP1-213ENST00000524288 CFAP54Q96N23 3096 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 MUC3AQ02505 3323 aa3.02□□□□□ -1.93
SKP1-213ENST00000524288 GVINP1Q7Z2Y8 2422 aa3.01□□□□□ -1.93
SKP1-213ENST00000524288 WDFY4Q6ZS81 3184 aa3.01□□□□□ -1.93
SKP1-213ENST00000524288 K7ERJ3 54 aa3.01□□□□□ -1.93
SKP1-213ENST00000524288 COX6B1P14854 86 aa3.01□□□□□ -1.93
SKP1-213ENST00000524288 UBE2D3P61077 147 aa3.01□□□□□ -1.93
SKP1-213ENST00000524288 UBE2D2P62837 147 aa3.01□□□□□ -1.93
SKP1-213ENST00000524288 LYRM7Q5U5X0 104 aa3.01□□□□□ -1.93
SKP1-213ENST00000524288 CFAP126Q5VTH2 177 aa3.01□□□□□ -1.93
SKP1-213ENST00000524288 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.01□□□□□ -1.93
SKP1-213ENST00000524288 DYNAPQ8N1N2 210 aa3.01□□□□□ -1.93
SKP1-213ENST00000524288 TOMM6Q96B49 74 aa3.01□□□□□ -1.93
SKP1-213ENST00000524288 C20orf78Q9BR46 151 aa3.01□□□□□ -1.93
SKP1-213ENST00000524288 MRPL35Q9NZE8 188 aaKnown RBP3.01□□□□□ -1.93
SKP1-213ENST00000524288 FRYLO94915 3013 aa3.01□□□□□ -1.93
SKP1-213ENST00000524288 ABCA1O95477 2261 aa3□□□□□ -1.93
SKP1-213ENST00000524288 CNOT1A5YKK6 2376 aaKnown RBP3□□□□□ -1.93
SKP1-213ENST00000524288 TMSB15BA0A087X1C1 80 aa3□□□□□ -1.93
SKP1-213ENST00000524288 MYMXA0A1B0GTQ4 84 aa3□□□□□ -1.93
SKP1-213ENST00000524288 OR11H12B2RN74 326 aa3□□□□□ -1.93
SKP1-213ENST00000524288 E7EQL1 145 aa3□□□□□ -1.93
SKP1-213ENST00000524288 CNIH1O95406 144 aa3□□□□□ -1.93
SKP1-213ENST00000524288 IGHV3-53P01767 116 aa3□□□□□ -1.93
SKP1-213ENST00000524288 ORM1P02763 201 aa3□□□□□ -1.93
SKP1-213ENST00000524288 CTSGP08311 255 aa3□□□□□ -1.93
SKP1-213ENST00000524288 LGALS1P09382 135 aaKnown RBP3□□□□□ -1.93
SKP1-213ENST00000524288 CD7P09564 240 aa3□□□□□ -1.93
SKP1-213ENST00000524288 WFDC2Q14508 124 aa3□□□□□ -1.93
SKP1-213ENST00000524288 MINOS1Q5TGZ0 78 aa3□□□□□ -1.93
SKP1-213ENST00000524288 OR11H1Q8NG94 326 aa3□□□□□ -1.93
SKP1-213ENST00000524288 OR11H2Q8NH07 326 aa3□□□□□ -1.93
SKP1-213ENST00000524288 Q8TAT8 98 aa3□□□□□ -1.93
SKP1-213ENST00000524288 MYOZ3Q8TDC0 251 aa3□□□□□ -1.93
SKP1-213ENST00000524288 ZNF418Q8TF45 676 aaPredicted RBP3□□□□□ -1.93
SKP1-213ENST00000524288 TTTY13Q9BZ97 58 aa3□□□□□ -1.93
SKP1-213ENST00000524288 GTSF1LQ9H1H1 148 aa3□□□□□ -1.93
SKP1-213ENST00000524288 DYNLRB1Q9NP97 96 aa3□□□□□ -1.93
SKP1-213ENST00000524288 MRPL16Q9NX20 251 aaKnown RBP3□□□□□ -1.93
SKP1-213ENST00000524288 TIMM8BQ9Y5J9 83 aaPredicted RBP3□□□□□ -1.93
SKP1-213ENST00000524288 MINOS1-NBL1R4GNA1 71 aa3□□□□□ -1.93
SKP1-213ENST00000524288 WDFY3Q8IZQ1 3526 aa3□□□□□ -1.93
SKP1-213ENST00000524288 SPEGQ15772 3267 aa2.99□□□□□ -1.93
SKP1-213ENST00000524288 IGKV2-24A0A0C4DH68 120 aa2.99□□□□□ -1.93
SKP1-213ENST00000524288 CLPSL1A2RUU4 121 aa2.99□□□□□ -1.93
SKP1-213ENST00000524288 PPP1R17O96001 155 aa2.99□□□□□ -1.93
SKP1-213ENST00000524288 APELAP0DMC3 54 aa2.99□□□□□ -1.93
SKP1-213ENST00000524288 CRYBA4P53673 196 aa2.99□□□□□ -1.93
SKP1-213ENST00000524288 FXYD7P58549 80 aa2.99□□□□□ -1.93
SKP1-213ENST00000524288 KRTAP10-10P60014 251 aa2.99□□□□□ -1.93
SKP1-213ENST00000524288 C4orf26Q17RF5 130 aa2.99□□□□□ -1.93
SKP1-213ENST00000524288 ETDBQ3ZM63 59 aa2.99□□□□□ -1.93
SKP1-213ENST00000524288 PPDPFLQ8WWR9 84 aa2.99□□□□□ -1.93
SKP1-213ENST00000524288 AGPAT4-IT1Q9H0P7 198 aa2.99□□□□□ -1.93
SKP1-213ENST00000524288 CYSLTR1Q9Y271 337 aa2.99□□□□□ -1.93
SKP1-213ENST00000524288 DSPP15924 2871 aaKnown RBP2.99□□□□□ -1.93
SKP1-213ENST00000524288 CEP250Q9BV73 2442 aa2.99□□□□□ -1.93
SKP1-213ENST00000524288 FRYQ5TBA9 3013 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 MUC4Q99102 2169 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 PIEZO2Q9H5I5 2752 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 POLEQ07864 2286 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 NBEAQ8NFP9 2946 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 PKDREJQ9NTG1 2253 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 TRBV20-1A0A075B6N2 111 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 APOMO95445 188 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 HLA-DMBP28068 263 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 TCTAP57738 103 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 CKS1BP61024 79 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 SMAGPQ0VAQ4 97 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 TMEM78Q5T7P6 136 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms