RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 IGLV3-1P01715 115 aa5.49□□□□□ -1.53
HDAC3-216ENST00000523088 CFC1BP0CG36 223 aa5.49□□□□□ -1.53
HDAC3-216ENST00000523088 CFC1P0CG37 223 aa5.49□□□□□ -1.53
HDAC3-216ENST00000523088 IGKV1-13P0DP09 117 aa5.49□□□□□ -1.53
HDAC3-216ENST00000523088 PI3P19957 117 aa5.49□□□□□ -1.53
HDAC3-216ENST00000523088 RNASE4P34096 147 aaKnown RBP5.49□□□□□ -1.53
HDAC3-216ENST00000523088 R4GMQ9 66 aa5.49□□□□□ -1.53
HDAC3-216ENST00000523088 IGHV3OR16-10A0A075B7F0 116 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 IGKV2D-26A0A0A0MRZ7 120 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 IGHV6-1A0A0B4J1U7 121 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 SCO2A0A1W2PP80 73 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 ERC2-IT1O76042 136 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 COX6CP09669 75 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 PLNP26678 52 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 FCER1GP30273 86 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 C6orf99Q4VX62 202 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 Q8IYB0 196 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 FAM216BQ8N7L0 139 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 ZNF491Q8N8L2 437 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 PRSS3P2Q8NHM4 247 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 GAFA1Q96PS6 74 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 GPHA2Q96T91 129 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 MAP6D1Q9H9H5 199 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 ZNRD1Q9P1U0 126 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 UBE2D4Q9Y2X8 147 aa5.48□□□□□ -1.53
HDAC3-216ENST00000523088 TRRAPQ9Y4A5 3859 aa5.47□□□□□ -1.53
HDAC3-216ENST00000523088 TET2Q6N021 2002 aaPredicted RBP5.47□□□□□ -1.53
HDAC3-216ENST00000523088 IGKV1D-17A0A075B6S4 117 aa5.47□□□□□ -1.53
HDAC3-216ENST00000523088 FAM223BA6NKX1 122 aa5.47□□□□□ -1.53
HDAC3-216ENST00000523088 H7C423 109 aa5.47□□□□□ -1.53
HDAC3-216ENST00000523088 CRIP2P52943 208 aaPredicted RBP5.47□□□□□ -1.53
HDAC3-216ENST00000523088 C20orf197Q8N268 126 aa5.47□□□□□ -1.53
HDAC3-216ENST00000523088 SMCR5Q8TEV8 140 aa5.47□□□□□ -1.53
HDAC3-216ENST00000523088 NABP2Q9BQ15 211 aa5.47□□□□□ -1.53
HDAC3-216ENST00000523088 WNK1Q9H4A3 2382 aa5.47□□□□□ -1.53
HDAC3-216ENST00000523088 A0A096LNJ9 63 aa5.46□□□□□ -1.54
HDAC3-216ENST00000523088 A0A1B0GW54 56 aa5.46□□□□□ -1.54
HDAC3-216ENST00000523088 IGHV3-33P01772 117 aa5.46□□□□□ -1.54
HDAC3-216ENST00000523088 IGHV4-59P01825 116 aa5.46□□□□□ -1.54
HDAC3-216ENST00000523088 PRM2P04554 102 aa5.46□□□□□ -1.54
HDAC3-216ENST00000523088 SAA1P0DJI8 122 aaPredicted RBP5.46□□□□□ -1.54
HDAC3-216ENST00000523088 ZNF818PQ6ZRF7 136 aa5.46□□□□□ -1.54
HDAC3-216ENST00000523088 TMEM167BQ9NRX6 74 aa5.46□□□□□ -1.54
HDAC3-216ENST00000523088 SMAD5-AS1Q9Y6J3 95 aa5.46□□□□□ -1.54
HDAC3-216ENST00000523088 A0A0J9YXV3 536 aa5.45□□□□□ -1.54
HDAC3-216ENST00000523088 TMEM30CPA0ZSE6 113 aa5.45□□□□□ -1.54
HDAC3-216ENST00000523088 C12orf77C9JDV5 145 aa5.45□□□□□ -1.54
HDAC3-216ENST00000523088 SPINK4O60575 86 aa5.45□□□□□ -1.54
HDAC3-216ENST00000523088 IGLV2-8P01709 118 aa5.45□□□□□ -1.54
HDAC3-216ENST00000523088 PROK1P58294 105 aa5.45□□□□□ -1.54
HDAC3-216ENST00000523088 LINC00205P59089 165 aa5.45□□□□□ -1.54
HDAC3-216ENST00000523088 EIF4EBP1Q13541 118 aaPredicted RBP5.45□□□□□ -1.54
HDAC3-216ENST00000523088 PRNTQ86SH4 94 aa5.45□□□□□ -1.54
HDAC3-216ENST00000523088 Q8N7P7 452 aa5.45□□□□□ -1.54
HDAC3-216ENST00000523088 ZNRF1Q8ND25 227 aa5.45□□□□□ -1.54
HDAC3-216ENST00000523088 PSENENQ9NZ42 101 aa5.45□□□□□ -1.54
HDAC3-216ENST00000523088 U3KQK5 164 aa5.45□□□□□ -1.54
HDAC3-216ENST00000523088 TMEM223A0PJW6 202 aa5.44□□□□□ -1.54
HDAC3-216ENST00000523088 CD28P10747 220 aa5.44□□□□□ -1.54
HDAC3-216ENST00000523088 SEC61BP60468 96 aaKnown RBP5.44□□□□□ -1.54
HDAC3-216ENST00000523088 HOXA4Q00056 320 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-216ENST00000523088 MAPKAPK5-AS1Q8N8E1 139 aa5.44□□□□□ -1.54
HDAC3-216ENST00000523088 LINC01006Q8NI28 216 aa5.44□□□□□ -1.54
HDAC3-216ENST00000523088 FGF23Q9GZV9 251 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-216ENST00000523088 CYP4F30PQ9H0H9 118 aa5.44□□□□□ -1.54
HDAC3-216ENST00000523088 TRAV12-1A0A0B4J245 112 aa5.43□□□□□ -1.54
HDAC3-216ENST00000523088 C17orf98A8MV24 154 aa5.43□□□□□ -1.54
HDAC3-216ENST00000523088 H3BUX3 64 aa5.43□□□□□ -1.54
HDAC3-216ENST00000523088 COX7A2P2O60397 106 aa5.43□□□□□ -1.54
HDAC3-216ENST00000523088 SH2D1AO60880 128 aa5.43□□□□□ -1.54
HDAC3-216ENST00000523088 MIFP14174 115 aa5.43□□□□□ -1.54
HDAC3-216ENST00000523088 MINOS1Q5TGZ0 78 aa5.43□□□□□ -1.54
HDAC3-216ENST00000523088 SPANXN1Q5VSR9 72 aa5.43□□□□□ -1.54
HDAC3-216ENST00000523088 MORN5Q5VZ52 161 aa5.43□□□□□ -1.54
HDAC3-216ENST00000523088 Q6ZSV7 163 aa5.43□□□□□ -1.54
HDAC3-216ENST00000523088 SCXQ7RTU7 201 aa5.43□□□□□ -1.54
HDAC3-216ENST00000523088 DYNAPQ8N1N2 210 aa5.43□□□□□ -1.54
HDAC3-216ENST00000523088 TTTY10Q9BZA0 68 aa5.43□□□□□ -1.54
HDAC3-216ENST00000523088 MINOS1-NBL1R4GNA1 71 aa5.43□□□□□ -1.54
HDAC3-216ENST00000523088 PKD1L1Q8TDX9 2849 aa5.43□□□□□ -1.54
HDAC3-216ENST00000523088 HIGD1CA8MV81 97 aa5.42□□□□□ -1.54
HDAC3-216ENST00000523088 J3QL48 77 aa5.42□□□□□ -1.54
HDAC3-216ENST00000523088 EDDM3BP56851 147 aa5.42□□□□□ -1.54
HDAC3-216ENST00000523088 MPLKIPQ8TAP9 179 aa5.42□□□□□ -1.54
HDAC3-216ENST00000523088 DKK2Q9UBU2 259 aa5.42□□□□□ -1.54
HDAC3-216ENST00000523088 F8WEM9 126 aa5.41□□□□□ -1.54
HDAC3-216ENST00000523088 IGHV1-8P0DP01 117 aa5.41□□□□□ -1.54
HDAC3-216ENST00000523088 EGR2P11161 476 aaPredicted RBP5.41□□□□□ -1.54
HDAC3-216ENST00000523088 LINC00269Q8N2A0 174 aa5.41□□□□□ -1.54
HDAC3-216ENST00000523088 TMEM263Q8WUH6 116 aaKnown RBP5.41□□□□□ -1.54
HDAC3-216ENST00000523088 CYYR1Q96J86 154 aa5.41□□□□□ -1.54
HDAC3-216ENST00000523088 PHLDA3Q9Y5J5 127 aa5.41□□□□□ -1.54
HDAC3-216ENST00000523088 ODF3BA8MYP8 253 aa5.4□□□□□ -1.54
HDAC3-216ENST00000523088 PLXNB1O43157 2135 aa5.4□□□□□ -1.54
HDAC3-216ENST00000523088 GNRH2O43555 120 aa5.4□□□□□ -1.54
HDAC3-216ENST00000523088 IGHV3-30P01768 117 aa5.4□□□□□ -1.54
HDAC3-216ENST00000523088 IGHV3-30-5P0DP03 117 aa5.4□□□□□ -1.54
HDAC3-216ENST00000523088 CCL3L1P16619 93 aa5.4□□□□□ -1.54
HDAC3-216ENST00000523088 COX7A1P24310 79 aa5.4□□□□□ -1.54
HDAC3-216ENST00000523088 SYCNQ0VAF6 134 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms