RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 COX6A2Q02221 97 aa16.5■□□□□ 0.23
LAPTM4B-203ENST00000521545 SPACA4Q8TDM5 124 aa16.5■□□□□ 0.23
LAPTM4B-203ENST00000521545 NAT8BQ9UHF3 227 aa16.5■□□□□ 0.23
LAPTM4B-203ENST00000521545 GVQW2A0A096LPI5 108 aaPredicted RBP16.49■□□□□ 0.23
LAPTM4B-203ENST00000521545 A0A1B0GVG6 124 aa16.49■□□□□ 0.23
LAPTM4B-203ENST00000521545 C7orf77A4D0Y5 90 aa16.49■□□□□ 0.23
LAPTM4B-203ENST00000521545 CCL25O15444 150 aa16.49■□□□□ 0.23
LAPTM4B-203ENST00000521545 FCER1GP30273 86 aa16.49■□□□□ 0.23
LAPTM4B-203ENST00000521545 RPL23P62829 140 aaKnown RBP16.49■□□□□ 0.23
LAPTM4B-203ENST00000521545 SS18Q15532 418 aa16.49■□□□□ 0.23
LAPTM4B-203ENST00000521545 ADIRFQ15847 76 aa16.49■□□□□ 0.23
LAPTM4B-203ENST00000521545 MRPL52Q86TS9 123 aaKnown RBP16.49■□□□□ 0.23
LAPTM4B-203ENST00000521545 SMKR1H3BMG3 65 aa16.48■□□□□ 0.23
LAPTM4B-203ENST00000521545 HNRNPA3P51991 378 aaKnown RBP16.47■□□□□ 0.23
LAPTM4B-203ENST00000521545 PEA15Q15121 130 aa16.47■□□□□ 0.23
LAPTM4B-203ENST00000521545 CDC42SE2Q9NRR3 84 aa16.47■□□□□ 0.23
LAPTM4B-203ENST00000521545 NAT8Q9UHE5 227 aa16.47■□□□□ 0.23
LAPTM4B-203ENST00000521545 SMAGPQ0VAQ4 97 aa16.46■□□□□ 0.23
LAPTM4B-203ENST00000521545 ZNF664Q8N3J9 261 aa16.46■□□□□ 0.23
LAPTM4B-203ENST00000521545 LRP1Q07954 4544 aaKnown RBP16.46■□□□□ 0.23
LAPTM4B-203ENST00000521545 IGHV1-58A0A0C4DH39 117 aa16.45■□□□□ 0.22
LAPTM4B-203ENST00000521545 SUMO2P61956 95 aaKnown RBP16.45■□□□□ 0.22
LAPTM4B-203ENST00000521545 SERTAD4-AS1Q5TG53 156 aa16.45■□□□□ 0.22
LAPTM4B-203ENST00000521545 PRSS3P2Q8NHM4 247 aa16.45■□□□□ 0.22
LAPTM4B-203ENST00000521545 PLAC8Q9NZF1 115 aa16.45■□□□□ 0.22
LAPTM4B-203ENST00000521545 MAJINQ3KP22 176 aa16.44■□□□□ 0.22
LAPTM4B-203ENST00000521545 KIR2DL4Q99706 377 aa16.44■□□□□ 0.22
LAPTM4B-203ENST00000521545 IGKV2-24A0A0C4DH68 120 aa16.43■□□□□ 0.22
LAPTM4B-203ENST00000521545 C9JQL5 133 aa16.43■□□□□ 0.22
LAPTM4B-203ENST00000521545 PPP1R2P9O14990 202 aa16.43■□□□□ 0.22
LAPTM4B-203ENST00000521545 FAM104BQ5XKR9 115 aa16.43■□□□□ 0.22
LAPTM4B-203ENST00000521545 CD164L2Q6UWJ8 174 aa16.43■□□□□ 0.22
LAPTM4B-203ENST00000521545 NRACQ8N912 160 aa16.43■□□□□ 0.22
LAPTM4B-203ENST00000521545 C7orf33Q8WU49 177 aa16.43■□□□□ 0.22
LAPTM4B-203ENST00000521545 SMIM27A0A1W2PRY6 76 aa16.42■□□□□ 0.22
LAPTM4B-203ENST00000521545 SMDT1Q9H4I9 107 aa16.42■□□□□ 0.22
LAPTM4B-203ENST00000521545 PKIGQ9Y2B9 76 aa16.42■□□□□ 0.22
LAPTM4B-203ENST00000521545 A0A1B0GW15 77 aa16.41■□□□□ 0.22
LAPTM4B-203ENST00000521545 CAMPP49913 170 aa16.41■□□□□ 0.22
LAPTM4B-203ENST00000521545 MRPL51Q4U2R6 128 aaKnown RBP16.41■□□□□ 0.22
LAPTM4B-203ENST00000521545 LINC00862A6NCI5 91 aa16.39■□□□□ 0.21
LAPTM4B-203ENST00000521545 C1orf196B1AJZ1 125 aa16.39■□□□□ 0.21
LAPTM4B-203ENST00000521545 ZNF561-AS1K7EIQ3 104 aa16.39■□□□□ 0.21
LAPTM4B-203ENST00000521545 SRSF3P84103 164 aaKnown RBP16.39■□□□□ 0.21
LAPTM4B-203ENST00000521545 Q6ZRU5 148 aa16.39■□□□□ 0.21
LAPTM4B-203ENST00000521545 TMEM18Q96B42 140 aa16.39■□□□□ 0.21
LAPTM4B-203ENST00000521545 CSDC2Q9Y534 153 aaKnown RBP16.39■□□□□ 0.21
LAPTM4B-203ENST00000521545 FAT3Q8TDW7 4589 aa16.38■□□□□ 0.21
LAPTM4B-203ENST00000521545 PKHD1L1Q86WI1 4243 aa16.38■□□□□ 0.21
LAPTM4B-203ENST00000521545 CKS2P33552 79 aa16.38■□□□□ 0.21
LAPTM4B-203ENST00000521545 STPG4Q8N801 248 aa16.38■□□□□ 0.21
LAPTM4B-203ENST00000521545 LINC00526Q96FQ7 95 aa16.38■□□□□ 0.21
LAPTM4B-203ENST00000521545 CARD19Q96LW7 228 aa16.38■□□□□ 0.21
LAPTM4B-203ENST00000521545 LINC00474Q9P2X8 69 aa16.38■□□□□ 0.21
LAPTM4B-203ENST00000521545 PHOX2AO14813 284 aa16.37■□□□□ 0.21
LAPTM4B-203ENST00000521545 C20orf78Q9BR46 151 aa16.37■□□□□ 0.21
LAPTM4B-203ENST00000521545 UBE2D4Q9Y2X8 147 aa16.37■□□□□ 0.21
LAPTM4B-203ENST00000521545 S100A8P05109 93 aa16.36■□□□□ 0.21
LAPTM4B-203ENST00000521545 MALP21145 153 aa16.36■□□□□ 0.21
LAPTM4B-203ENST00000521545 A0A096LNI7 61 aa16.35■□□□□ 0.21
LAPTM4B-203ENST00000521545 TCAPO15273 167 aa16.35■□□□□ 0.21
LAPTM4B-203ENST00000521545 TRBV24-1A0A075B6N3 115 aa16.34■□□□□ 0.21
LAPTM4B-203ENST00000521545 F8W036 122 aa16.34■□□□□ 0.21
LAPTM4B-203ENST00000521545 COX7A2LO14548 114 aa16.34■□□□□ 0.21
LAPTM4B-203ENST00000521545 SYCNQ0VAF6 134 aa16.34■□□□□ 0.21
LAPTM4B-203ENST00000521545 TRAV13-1A0A0B4J241 112 aa16.33■□□□□ 0.2
LAPTM4B-203ENST00000521545 RNASE13Q5GAN3 156 aaKnown RBP16.33■□□□□ 0.2
LAPTM4B-203ENST00000521545 MRPL54Q6P161 138 aaKnown RBP16.33■□□□□ 0.2
LAPTM4B-203ENST00000521545 TIMM21Q9BVV7 248 aa16.33■□□□□ 0.2
LAPTM4B-203ENST00000521545 RPL32P62910 135 aaKnown RBP16.32■□□□□ 0.2
LAPTM4B-203ENST00000521545 HBBP68871 147 aa16.32■□□□□ 0.2
LAPTM4B-203ENST00000521545 TNFRSF6BO95407 300 aa16.31■□□□□ 0.2
LAPTM4B-203ENST00000521545 D6R8Y8 96 aa16.29■□□□□ 0.2
LAPTM4B-203ENST00000521545 Q6ZUT4 128 aa16.29■□□□□ 0.2
LAPTM4B-203ENST00000521545 IGLV4-69A0A075B6H9 119 aa16.28■□□□□ 0.2
LAPTM4B-203ENST00000521545 SMIM2Q9BVW6 85 aa16.28■□□□□ 0.2
LAPTM4B-203ENST00000521545 APOMO95445 188 aa16.27■□□□□ 0.2
LAPTM4B-203ENST00000521545 PPBPP02775 128 aa16.27■□□□□ 0.2
LAPTM4B-203ENST00000521545 A0A1B0GXF2 115 aa16.26■□□□□ 0.19
LAPTM4B-203ENST00000521545 C5orf38Q86SI9 138 aa16.26■□□□□ 0.19
LAPTM4B-203ENST00000521545 PLA2G2DQ9UNK4 145 aa16.26■□□□□ 0.19
LAPTM4B-203ENST00000521545 LOC107984640A0A0U1RRK4 108 aa16.25■□□□□ 0.19
LAPTM4B-203ENST00000521545 RPL39P62891 51 aaKnown RBP16.25■□□□□ 0.19
LAPTM4B-203ENST00000521545 CAMK2N2Q96S95 79 aa16.25■□□□□ 0.19
LAPTM4B-203ENST00000521545 PRR3P79522 188 aaKnown RBP16.24■□□□□ 0.19
LAPTM4B-203ENST00000521545 SPANXA1Q9NS26 97 aa16.24■□□□□ 0.19
LAPTM4B-203ENST00000521545 NPYP01303 97 aa16.23■□□□□ 0.19
LAPTM4B-203ENST00000521545 MT1HL1P0DM35 61 aa16.23■□□□□ 0.19
LAPTM4B-203ENST00000521545 GAGE2BQ13066 116 aa16.23■□□□□ 0.19
LAPTM4B-203ENST00000521545 C2orf48Q96LS8 159 aa16.23■□□□□ 0.19
LAPTM4B-203ENST00000521545 PTTG1IPP53801 180 aa16.22■□□□□ 0.19
LAPTM4B-203ENST00000521545 ATP5L2Q7Z4Y8 100 aa16.22■□□□□ 0.19
LAPTM4B-203ENST00000521545 ORMDL3Q8N138 153 aa16.21■□□□□ 0.19
LAPTM4B-203ENST00000521545 RAB5AP20339 215 aa16.2■□□□□ 0.18
LAPTM4B-203ENST00000521545 MRPS36P82909 103 aaKnown RBP16.2■□□□□ 0.18
LAPTM4B-203ENST00000521545 TMEM136Q6ZRR5 245 aa16.2■□□□□ 0.18
LAPTM4B-203ENST00000521545 SPAG11BQ08648 103 aa16.19■□□□□ 0.18
LAPTM4B-203ENST00000521545 PRELID3AQ96N28 172 aa16.19■□□□□ 0.18
LAPTM4B-203ENST00000521545 OR10D4PQ8NGN7 298 aa16.18■□□□□ 0.18
LAPTM4B-203ENST00000521545 OPRPNQ99935 248 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms