RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 PRB4P10163 310 aaPredicted RBP3.25□□□□□ -1.89
SDCBP-207ENST00000520168 RPL7P18124 248 aaKnown RBP3.25□□□□□ -1.89
SDCBP-207ENST00000520168 ASIPP42127 132 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 NDUFA6P56556 154 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 PMAIP1Q13794 54 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 MORN5Q5VZ52 161 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 RASL11AQ6T310 242 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 LYPD5Q6UWN5 251 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 Q6ZRU5 148 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 BAGE2Q86Y30 109 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 BPIFA4PQ86YQ2 179 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 FXYD5Q96DB9 178 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 TMEM101Q96IK0 257 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 CHAC1Q9BUX1 264 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 OTORQ9NRC9 128 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 IL36BQ9NZH7 164 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 PRO0255Q9UI72 69 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 EPDR1Q9UM22 224 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 TRBV20OR9-2A0A075B6H5 130 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 TRBV6-1A0A0K0K1D8 114 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 GGTLC3B5MD39 225 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 PEX7O00628 323 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 NCR2O95944 276 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 MT1HL1P0DM35 61 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 FABP4P15090 132 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 RPL37AP61513 92 aaKnown RBP3.24□□□□□ -1.89
SDCBP-207ENST00000520168 LYZP61626 148 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 LAGE3Q14657 143 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 CENPWQ5EE01 88 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 LYRM7Q5U5X0 104 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 MRPL54Q6P161 138 aaKnown RBP3.24□□□□□ -1.89
SDCBP-207ENST00000520168 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 SH2D6Q7Z4S9 175 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 TMEM183AQ8IXX5 376 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 OR8A1Q8NGG7 326 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 FMC1Q96HJ9 113 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 SHANK2-AS3Q9BTD1 123 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 TM2D2Q9BX73 214 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 TMEM191AQ9H0A3 160 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 Q9UF83 564 aa3.24□□□□□ -1.89
SDCBP-207ENST00000520168 TRBV19A0A075B6N1 114 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 C7orf71A4D174 169 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 IBA57-AS1B1ANH7 110 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 MRPS12O15235 138 aaKnown RBP3.23□□□□□ -1.89
SDCBP-207ENST00000520168 HIST1H2BKO60814 126 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 MT-ND6P03923 174 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 SLC25A5P05141 298 aaKnown RBP3.23□□□□□ -1.89
SDCBP-207ENST00000520168 HIST1H2BJP06899 126 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 TRGC1P0CF51 173 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 PYYP10082 97 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 HIST1H2BOP23527 126 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 HIST1H2BBP33778 126 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 HNRNPA3P51991 378 aaKnown RBP3.23□□□□□ -1.89
SDCBP-207ENST00000520168 HIST1H2BDP58876 126 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 HIST1H2BCP62807 126 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 PDE6HQ13956 83 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 HIST2H2BEQ16778 126 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 ANXA2RQ3ZCQ2 193 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 LINC01556Q5JQF7 62 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 COA6Q5JTJ3 125 aaKnown RBP3.23□□□□□ -1.89
SDCBP-207ENST00000520168 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.23□□□□□ -1.89
SDCBP-207ENST00000520168 Q6Q795 121 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 Q6ZTI0 123 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 WFDC10BQ8IUB3 73 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 NUP35Q8NFH5 326 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 CMTM2Q8TAZ6 248 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 CIRBP-AS1Q8TBR5 109 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 HIST1H2BHQ93079 126 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 LINC00477Q96M19 166 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 HIST1H2BNQ99877 126 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 HIST1H2BMQ99879 126 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 VGLL1Q99990 258 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 GNB1LQ9BYB4 327 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 PKIGQ9Y2B9 76 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 TRAPPC1Q9Y5R8 145 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 V9GYV3 84 aa3.23□□□□□ -1.89
SDCBP-207ENST00000520168 TRGV1A0A0A0MS02 117 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 TRAV8-2A0A0B4J237 113 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 IGHV3-38A0A0C4DH36 116 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 SMIM27A0A1W2PRY6 76 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 A8MWL6 223 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 DIRC3C9JPN6 131 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 TMEM262E9PQX1 116 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 SMKR1H3BMG3 65 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 H3BRN7 92 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 ZNF253O75346 499 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 GAS8-AS1O95177 125 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 LTAP01374 205 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 TCRAP04437 139 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 SPINK8P0C7L1 97 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 MGST1P10620 155 aaKnown RBP3.22□□□□□ -1.89
SDCBP-207ENST00000520168 CSN1S1P47710 185 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 UBE2G1P62253 170 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 MEIG1Q5JSS6 88 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 IBA57Q5T440 356 aaKnown RBP3.22□□□□□ -1.89
SDCBP-207ENST00000520168 RNF182Q8N6D2 247 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 TSKUQ8WUA8 353 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 C9orf85Q96MD7 179 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 ODF3Q96PU9 254 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 HIST1H2BLQ99880 126 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms