RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 HSBP1O75506 76 aa7.77□□□□□ -1.17
ARFGEF1-202ENST00000517955 HBDP02042 147 aa7.77□□□□□ -1.17
ARFGEF1-202ENST00000517955 FGF6P10767 208 aa7.77□□□□□ -1.17
ARFGEF1-202ENST00000517955 MRPS36P82909 103 aaKnown RBP7.77□□□□□ -1.17
ARFGEF1-202ENST00000517955 GAGE6Q13070 117 aa7.77□□□□□ -1.17
ARFGEF1-202ENST00000517955 LINC00476Q8WZB0 136 aa7.77□□□□□ -1.17
ARFGEF1-202ENST00000517955 A0A087WX48 190 aa7.76□□□□□ -1.17
ARFGEF1-202ENST00000517955 TMEM262E9PQX1 116 aa7.76□□□□□ -1.17
ARFGEF1-202ENST00000517955 BTF3P20290 206 aaKnown RBP7.76□□□□□ -1.17
ARFGEF1-202ENST00000517955 NDUFA6P56556 154 aa7.76□□□□□ -1.17
ARFGEF1-202ENST00000517955 RBX1P62877 108 aa7.76□□□□□ -1.17
ARFGEF1-202ENST00000517955 RPL39P62891 51 aaKnown RBP7.76□□□□□ -1.17
ARFGEF1-202ENST00000517955 MPV17L2Q567V2 206 aa7.76□□□□□ -1.17
ARFGEF1-202ENST00000517955 PDZD11Q5EBL8 140 aa7.76□□□□□ -1.17
ARFGEF1-202ENST00000517955 ERASQ7Z444 233 aa7.76□□□□□ -1.17
ARFGEF1-202ENST00000517955 PACRGQ96M98 296 aaPredicted RBP7.76□□□□□ -1.17
ARFGEF1-202ENST00000517955 TIMM17AQ99595 171 aa7.76□□□□□ -1.17
ARFGEF1-202ENST00000517955 KMT2CQ8NEZ4 4911 aaKnown RBP7.75□□□□□ -1.17
ARFGEF1-202ENST00000517955 TRAV9-2A0A087WT02 112 aa7.75□□□□□ -1.17
ARFGEF1-202ENST00000517955 AMMECR1LQ6DCA0 310 aa7.75□□□□□ -1.17
ARFGEF1-202ENST00000517955 C10orf126Q8N4M7 172 aa7.75□□□□□ -1.17
ARFGEF1-202ENST00000517955 FAM104AQ969W3 186 aa7.75□□□□□ -1.17
ARFGEF1-202ENST00000517955 TMEM141Q96I45 108 aa7.75□□□□□ -1.17
ARFGEF1-202ENST00000517955 TMEM101Q96IK0 257 aa7.75□□□□□ -1.17
ARFGEF1-202ENST00000517955 CDC42SE2Q9NRR3 84 aa7.75□□□□□ -1.17
ARFGEF1-202ENST00000517955 DNAH1Q9P2D7 4330 aa7.74□□□□□ -1.17
ARFGEF1-202ENST00000517955 LCE3BQ5TA77 95 aa7.74□□□□□ -1.17
ARFGEF1-202ENST00000517955 OR5A1Q8NGJ0 315 aa7.74□□□□□ -1.17
ARFGEF1-202ENST00000517955 PRR34Q9NV39 138 aa7.74□□□□□ -1.17
ARFGEF1-202ENST00000517955 ALMS1Q8TCU4 4167 aa7.74□□□□□ -1.17
ARFGEF1-202ENST00000517955 IGLV4-60A0A075B6I1 120 aa7.73□□□□□ -1.17
ARFGEF1-202ENST00000517955 IBA57-AS1B1ANH7 110 aa7.73□□□□□ -1.17
ARFGEF1-202ENST00000517955 ATP5LO75964 103 aa7.73□□□□□ -1.17
ARFGEF1-202ENST00000517955 S100A6P06703 90 aa7.73□□□□□ -1.17
ARFGEF1-202ENST00000517955 TTC32Q5I0X7 151 aa7.73□□□□□ -1.17
ARFGEF1-202ENST00000517955 PAPPA-AS1Q5QFB9 102 aa7.73□□□□□ -1.17
ARFGEF1-202ENST00000517955 DGAT2L7PQ6IED9 249 aa7.73□□□□□ -1.17
ARFGEF1-202ENST00000517955 FAM19A2Q8N3H0 131 aa7.73□□□□□ -1.17
ARFGEF1-202ENST00000517955 ZNF664Q8N3J9 261 aa7.73□□□□□ -1.17
ARFGEF1-202ENST00000517955 Q8N976 141 aa7.73□□□□□ -1.17
ARFGEF1-202ENST00000517955 SCGB3A1Q96QR1 104 aa7.73□□□□□ -1.17
ARFGEF1-202ENST00000517955 RYR3Q15413 4870 aa7.73□□□□□ -1.17
ARFGEF1-202ENST00000517955 KMT2AQ03164 3969 aa7.72□□□□□ -1.17
ARFGEF1-202ENST00000517955 IGLV4-3A0A075B6K6 122 aa7.72□□□□□ -1.17
ARFGEF1-202ENST00000517955 NBDYA0A0U1RRE5 68 aa7.72□□□□□ -1.17
ARFGEF1-202ENST00000517955 C5orf52A6NGY3 159 aa7.72□□□□□ -1.17
ARFGEF1-202ENST00000517955 CCL25O15444 150 aa7.72□□□□□ -1.17
ARFGEF1-202ENST00000517955 LY6G6CO95867 125 aa7.72□□□□□ -1.17
ARFGEF1-202ENST00000517955 PMCHL1Q16048 86 aa7.72□□□□□ -1.17
ARFGEF1-202ENST00000517955 AMELXQ99217 191 aa7.72□□□□□ -1.17
ARFGEF1-202ENST00000517955 LCE6AA0A183 80 aa7.71□□□□□ -1.18
ARFGEF1-202ENST00000517955 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.71□□□□□ -1.18
ARFGEF1-202ENST00000517955 LEPROTL1O95214 131 aa7.71□□□□□ -1.18
ARFGEF1-202ENST00000517955 IGHV3-30P01768 117 aa7.71□□□□□ -1.18
ARFGEF1-202ENST00000517955 IGHV3-33P01772 117 aa7.71□□□□□ -1.18
ARFGEF1-202ENST00000517955 IGHV3-30-3P0DP02 117 aa7.71□□□□□ -1.18
ARFGEF1-202ENST00000517955 IGHV3-30-5P0DP03 117 aa7.71□□□□□ -1.18
ARFGEF1-202ENST00000517955 Q6ZR54 194 aa7.71□□□□□ -1.18
ARFGEF1-202ENST00000517955 HSPB8Q9UJY1 196 aa7.71□□□□□ -1.18
ARFGEF1-202ENST00000517955 DNAH6Q9C0G6 4158 aa7.71□□□□□ -1.18
ARFGEF1-202ENST00000517955 ANGP03950 147 aaKnown RBP7.7□□□□□ -1.18
ARFGEF1-202ENST00000517955 Q6ZUT4 128 aa7.7□□□□□ -1.18
ARFGEF1-202ENST00000517955 HIST3H2BBQ8N257 126 aa7.7□□□□□ -1.18
ARFGEF1-202ENST00000517955 KLK12Q9UKR0 248 aa7.7□□□□□ -1.18
ARFGEF1-202ENST00000517955 TMA7Q9Y2S6 64 aaKnown RBP7.7□□□□□ -1.18
ARFGEF1-202ENST00000517955 TRAV8-3A0A0A6YYJ7 113 aa7.69□□□□□ -1.18
ARFGEF1-202ENST00000517955 TRAV8-4A0A0B4J246 113 aa7.69□□□□□ -1.18
ARFGEF1-202ENST00000517955 SNRPEP62304 92 aaKnown RBP7.69□□□□□ -1.18
ARFGEF1-202ENST00000517955 REG3AQ06141 175 aa7.69□□□□□ -1.18
ARFGEF1-202ENST00000517955 MIAQ16674 131 aa7.69□□□□□ -1.18
ARFGEF1-202ENST00000517955 ENHOQ6UWT2 76 aa7.69□□□□□ -1.18
ARFGEF1-202ENST00000517955 Q6ZN92 141 aa7.69□□□□□ -1.18
ARFGEF1-202ENST00000517955 LINC00173Q6ZV60 143 aa7.69□□□□□ -1.18
ARFGEF1-202ENST00000517955 FAM19A3Q7Z5A8 133 aa7.69□□□□□ -1.18
ARFGEF1-202ENST00000517955 LINC00269Q8N2A0 174 aa7.69□□□□□ -1.18
ARFGEF1-202ENST00000517955 IFI27L1Q96BM0 104 aa7.69□□□□□ -1.18
ARFGEF1-202ENST00000517955 OPRPNQ99935 248 aaPredicted RBP7.69□□□□□ -1.18
ARFGEF1-202ENST00000517955 KRTAP1-5Q9BYS1 174 aa7.69□□□□□ -1.18
ARFGEF1-202ENST00000517955 VCX2Q9H322 139 aa7.69□□□□□ -1.18
ARFGEF1-202ENST00000517955 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.69□□□□□ -1.18
ARFGEF1-202ENST00000517955 TRAV12-1A0A0B4J245 112 aa7.68□□□□□ -1.18
ARFGEF1-202ENST00000517955 PMVKQ15126 192 aa7.68□□□□□ -1.18
ARFGEF1-202ENST00000517955 TEX43Q6ZNM6 134 aa7.68□□□□□ -1.18
ARFGEF1-202ENST00000517955 BAALCQ8WXS3 180 aa7.68□□□□□ -1.18
ARFGEF1-202ENST00000517955 LINC00959A0A1B0GUT2 108 aa7.67□□□□□ -1.18
ARFGEF1-202ENST00000517955 CRPP02741 224 aa7.67□□□□□ -1.18
ARFGEF1-202ENST00000517955 SPATA12Q7Z6I5 190 aa7.67□□□□□ -1.18
ARFGEF1-202ENST00000517955 UBE2WQ96B02 151 aa7.67□□□□□ -1.18
ARFGEF1-202ENST00000517955 C2orf88Q9BSF0 95 aa7.67□□□□□ -1.18
ARFGEF1-202ENST00000517955 CST9LQ9H4G1 147 aa7.67□□□□□ -1.18
ARFGEF1-202ENST00000517955 LOC105371267A0A1B0GV96 52 aa7.66□□□□□ -1.18
ARFGEF1-202ENST00000517955 H3BS24 57 aa7.66□□□□□ -1.18
ARFGEF1-202ENST00000517955 S100A2P29034 98 aa7.66□□□□□ -1.18
ARFGEF1-202ENST00000517955 UBE2D1P51668 147 aa7.66□□□□□ -1.18
ARFGEF1-202ENST00000517955 NFE4Q86UQ8 179 aa7.66□□□□□ -1.18
ARFGEF1-202ENST00000517955 HIST1H2BLQ99880 126 aa7.66□□□□□ -1.18
ARFGEF1-202ENST00000517955 COX11Q9Y6N1 276 aa7.66□□□□□ -1.18
ARFGEF1-202ENST00000517955 PRSS29PA6NIE9 313 aa7.65□□□□□ -1.18
ARFGEF1-202ENST00000517955 IFITM10A6NMD0 228 aa7.65□□□□□ -1.18
ARFGEF1-202ENST00000517955 FABP4P15090 132 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms