RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 UBE2L6O14933 153 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 APCSP02743 223 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 PPBPP02775 128 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 POLR2KP53803 58 aaKnown RBP3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 IQCJQ1A5X6 159 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 KIAA1644Q3SXP7 199 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 COX19Q49B96 90 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 TTC32Q5I0X7 151 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 LINC01556Q5JQF7 62 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 LCE3BQ5TA77 95 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 C1orf134Q5TEV5 83 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 NIT1Q86X76 327 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 C6orf223Q8N319 242 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 C10orf126Q8N4M7 172 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 PRELID3AQ96N28 172 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 ALKBH7Q9BT30 221 aaPredicted RBP3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 TMEM243Q9BU79 118 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 TMEM70Q9BUB7 260 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 KLK12Q9UKR0 248 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 TRBV24-1A0A075B6N3 115 aa3.91□□□□□ -1.78
SCARNA6.1-201ENST00000516989 K7EP13 123 aa3.91□□□□□ -1.78
SCARNA6.1-201ENST00000516989 NPYP01303 97 aa3.91□□□□□ -1.78
SCARNA6.1-201ENST00000516989 FCER1GP30273 86 aa3.91□□□□□ -1.78
SCARNA6.1-201ENST00000516989 FABP9Q0Z7S8 132 aa3.91□□□□□ -1.78
SCARNA6.1-201ENST00000516989 ELOBQ15370 118 aa3.91□□□□□ -1.78
SCARNA6.1-201ENST00000516989 KIR2DL4Q99706 377 aa3.91□□□□□ -1.78
SCARNA6.1-201ENST00000516989 C20orf78Q9BR46 151 aa3.91□□□□□ -1.78
SCARNA6.1-201ENST00000516989 GNB1LQ9BYB4 327 aa3.91□□□□□ -1.78
SCARNA6.1-201ENST00000516989 KRTAP1-5Q9BYS1 174 aa3.91□□□□□ -1.78
SCARNA6.1-201ENST00000516989 SMCO4Q9NRQ5 59 aa3.91□□□□□ -1.78
SCARNA6.1-201ENST00000516989 SACSQ9NZJ4 4579 aa3.91□□□□□ -1.78
SCARNA6.1-201ENST00000516989 TRAPPC1Q9Y5R8 145 aa3.91□□□□□ -1.78
SCARNA6.1-201ENST00000516989 ALMS1Q8TCU4 4167 aa3.91□□□□□ -1.78
SCARNA6.1-201ENST00000516989 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 TRBV27A0A0K0K1C4 114 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 IGKV2-29A2NJV5 120 aaPredicted RBP3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 IBA57-AS1B1ANH7 110 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 PHOX2AO14813 284 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 TSHBP01222 138 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 HLA-DQA1P01909 254 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 ANGP03950 147 aaKnown RBP3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 RAB5AP20339 215 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 PKIAP61925 76 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 RBX1P62877 108 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 MPV17L2Q567V2 206 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 AMMECR1LQ6DCA0 310 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 RNASEKQ6P5S7 137 aaKnown RBP3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 Q8N976 141 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 UBE2WQ96B02 151 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 CHCHD7Q9BUK0 85 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 KRTAP9-3Q9BYQ3 159 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 MAP1LC3AQ9H492 121 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 Q9HAA7 133 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 VPS13DQ5THJ4 4388 aa3.9□□□□□ -1.79
SCARNA6.1-201ENST00000516989 LYSTQ99698 3801 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 TRAV8-3A0A0A6YYJ7 113 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 IGLV9-49A0A0B4J1Y8 123 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 RTL8CO15255 209 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 TCAPO15273 167 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 PSCAO43653 123 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 ATP6V1G1O75348 118 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 CRPP02741 224 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 MT-ND6P03923 174 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 NFE4Q86UQ8 179 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 CBLN2Q8IUK8 224 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 LINC00269Q8N2A0 174 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 TMEM101Q96IK0 257 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 SMIM2Q9BVW6 85 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 LAMTOR2Q9Y2Q5 125 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 KMT2AQ03164 3969 aa3.89□□□□□ -1.79
SCARNA6.1-201ENST00000516989 DNAH1Q9P2D7 4330 aa3.88□□□□□ -1.79
SCARNA6.1-201ENST00000516989 IGKV2D-24A0A075B6R9 120 aa3.88□□□□□ -1.79
SCARNA6.1-201ENST00000516989 IGKV3OR2-268A0A0C4DH90 116 aa3.88□□□□□ -1.79
SCARNA6.1-201ENST00000516989 A0A1B0GUV1 79 aa3.88□□□□□ -1.79
SCARNA6.1-201ENST00000516989 H7C423 109 aa3.88□□□□□ -1.79
SCARNA6.1-201ENST00000516989 FGF6P10767 208 aa3.88□□□□□ -1.79
SCARNA6.1-201ENST00000516989 ESDP10768 282 aa3.88□□□□□ -1.79
SCARNA6.1-201ENST00000516989 IFI27P40305 119 aaPredicted RBP3.88□□□□□ -1.79
SCARNA6.1-201ENST00000516989 RPL32P62910 135 aaKnown RBP3.88□□□□□ -1.79
SCARNA6.1-201ENST00000516989 Q0VG73 95 aa3.88□□□□□ -1.79
SCARNA6.1-201ENST00000516989 CLPSL2Q6UWE3 100 aa3.88□□□□□ -1.79
SCARNA6.1-201ENST00000516989 LINC00336Q6ZUF6 198 aa3.88□□□□□ -1.79
SCARNA6.1-201ENST00000516989 Q8N8P6 123 aa3.88□□□□□ -1.79
SCARNA6.1-201ENST00000516989 C20orf203Q8NBC4 194 aa3.88□□□□□ -1.79
SCARNA6.1-201ENST00000516989 RMI2Q96E14 147 aa3.88□□□□□ -1.79
SCARNA6.1-201ENST00000516989 IGLV4-60A0A075B6I1 120 aa3.87□□□□□ -1.79
SCARNA6.1-201ENST00000516989 SCO1O75880 301 aa3.87□□□□□ -1.79
SCARNA6.1-201ENST00000516989 REG3AQ06141 175 aa3.87□□□□□ -1.79
SCARNA6.1-201ENST00000516989 SMAGPQ0VAQ4 97 aa3.87□□□□□ -1.79
SCARNA6.1-201ENST00000516989 LAGE3Q14657 143 aa3.87□□□□□ -1.79
SCARNA6.1-201ENST00000516989 CD164L2Q6UWJ8 174 aa3.87□□□□□ -1.79
SCARNA6.1-201ENST00000516989 ENHOQ6UWT2 76 aa3.87□□□□□ -1.79
SCARNA6.1-201ENST00000516989 OR5A1Q8NGJ0 315 aa3.87□□□□□ -1.79
SCARNA6.1-201ENST00000516989 YPEL4Q96NS1 127 aa3.87□□□□□ -1.79
SCARNA6.1-201ENST00000516989 NXT2Q9NPJ8 142 aaKnown RBP3.87□□□□□ -1.79
SCARNA6.1-201ENST00000516989 IGLV10-54A0A075B6I4 117 aa3.86□□□□□ -1.79
SCARNA6.1-201ENST00000516989 ZNF25P17030 456 aaPredicted RBP3.86□□□□□ -1.79
SCARNA6.1-201ENST00000516989 RPL39P62891 51 aaKnown RBP3.86□□□□□ -1.79
SCARNA6.1-201ENST00000516989 MIAQ16674 131 aa3.86□□□□□ -1.79
SCARNA6.1-201ENST00000516989 ORMDL2Q53FV1 153 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms