RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 SPAG11BQ08648 103 aa3.8□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 SPAG11AQ6PDA7 123 aa3.8□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 SPACA4Q8TDM5 124 aa3.8□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 PI4KAP42356 2102 aa3.8□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 DNAL4O96015 105 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 IGLV3-1P01715 115 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 COX8AP10176 69 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 CCL3L1P16619 93 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 C10orf55Q5SWW7 151 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 FAM74A4Q5TZK3 123 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 MRC1P22897 1456 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 ESPL1Q14674 2120 aa3.79□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 MED12Q93074 2177 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 FAM223BA6NKX1 122 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 IGLV6-57P01721 117 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 KRTAP10-11P60412 298 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 COX7B2Q8TF08 81 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 PSENENQ9NZ42 101 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 KLK9Q9UKQ9 250 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 ARL2-SNX15V9GYD0 113 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 NKTRP30414 1462 aaKnown RBP3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 COL4A2P08572 1712 aa3.78□□□□□ -1.8
RNU6ATAC39P-201ENST00000516309 SPTBP11277 2137 aa3.77□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 TOP2AP11388 1531 aaKnown RBP3.77□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 FXYD1O00168 92 aa3.77□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 KRTAP1-4P0C5Y4 121 aa3.77□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 GCHFRP30047 84 aa3.77□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 Q6JHZ5 121 aa3.77□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 SEC16AO15027 2179 aa3.77□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 PRXQ9BXM0 1461 aa3.76□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 ARMS2P0C7Q2 107 aa3.76□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 ATP5EP2Q5VTU8 51 aa3.76□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 PPP1R1CQ8WVI7 109 aa3.76□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 R4GMQ9 66 aa3.76□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 BAZ2BQ9UIF8 2168 aaKnown RBP3.76□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 ANKRD36A6QL64 1941 aa3.76□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 NUP188Q5SRE5 1749 aa3.75□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 CLASP1Q7Z460 1538 aa3.75□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 SYCP2Q9BX26 1530 aa3.75□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 BRWD1Q9NSI6 2320 aa3.75□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 LEPROTL1O95214 131 aa3.75□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 IGKV1-17P01599 117 aa3.75□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 KRTAP10-9P60411 292 aa3.75□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 TNRC6BQ9UPQ9 1833 aaKnown RBP3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 LAMC1P11047 1609 aa3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 GAS8-AS1O95177 125 aa3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 RNASE3P12724 160 aaKnown RBP3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 PKD1L3Q7Z443 1732 aa3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 WFDC10AQ9H1F0 79 aa3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 CRYBG1Q9Y4K1 1723 aa3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 SHROOM3Q8TF72 1996 aa3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 SHPRHQ149N8 1683 aa3.74□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 ALKQ9UM73 1620 aa3.73□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 RALGAPBQ86X10 1494 aa3.73□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 GLI2P10070 1586 aa3.73□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 A0A1W2PNN7 141 aa3.73□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 CCL18P55774 89 aa3.73□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 PRR15LQ9BU68 103 aa3.73□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 CICQ96RK0 1608 aaPredicted RBP3.73□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 CDC42BPGQ6DT37 1551 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 IGKV3D-7A0A0C4DH55 119 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 IGKV3OR2-268A0A0C4DH90 116 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 LRCOL1A6NCL2 159 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 C10orf142B7Z368 130 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 D6R8Y8 96 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 F8VRH5 84 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 H3BRN7 92 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 RPL37AP61513 92 aaKnown RBP3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 DEFB132Q7Z7B7 95 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 MUSTN1Q8IVN3 82 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 TMEM14CQ9P0S9 112 aa3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 COL5A1P20908 1838 aaPredicted RBP3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 CEP170BQ9Y4F5 1589 aaPredicted RBP3.72□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 WIZO95785 1651 aa3.71□□□□□ -1.81
RNU6ATAC39P-201ENST00000516309 UNC13CQ8NB66 2214 aa3.71□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 SPINT3P49223 89 aa3.71□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 MAST1Q9Y2H9 1570 aa3.71□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 SPAG17Q6Q759 2223 aa3.71□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 NHSQ6T4R5 1651 aa3.71□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 C3orf79P0CE67 100 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 IFI27P40305 119 aaPredicted RBP3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 PRR9Q5T870 116 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 ZNF563Q8TA94 476 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 HILPDAQ9Y5L2 63 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 V9GYV3 84 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 ALS2Q96Q42 1657 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 MYO7BQ6PIF6 2116 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 PAPPAQ13219 1627 aa3.7□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 ARFGEF3Q5TH69 2177 aa3.69□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 PCDH15Q96QU1 1955 aa3.69□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 IGKV2-40A0A087WW87 121 aaPredicted RBP3.69□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 IGKV2D-40P01614 121 aaPredicted RBP3.69□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 LINC00315P59091 139 aa3.69□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 PROK2Q9HC23 129 aa3.69□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 UBE2D4Q9Y2X8 147 aa3.69□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 IFT172Q9UG01 1749 aa3.68□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 PARP4Q9UKK3 1724 aaKnown RBP3.68□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 IGKV2-24A0A0C4DH68 120 aa3.68□□□□□ -1.82
RNU6ATAC39P-201ENST00000516309 TRBV6-5A0A0K0K1A5 114 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms