RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 HIST1H1BP16401 226 aaKnown RBP-3.59□□□□□ -2.98
SCARNA23-201ENST00000516060 LELP1Q5T871 98 aa-3.59□□□□□ -2.98
SCARNA23-201ENST00000516060 C9orf16Q9BUW7 83 aa-3.59□□□□□ -2.98
SCARNA23-201ENST00000516060 RPRMQ9NS64 109 aa-3.59□□□□□ -2.98
SCARNA23-201ENST00000516060 NDUFA12Q9UI09 145 aa-3.59□□□□□ -2.98
SCARNA23-201ENST00000516060 MAP3K1Q13233 1512 aa-3.6□□□□□ -2.98
SCARNA23-201ENST00000516060 NKTRP30414 1462 aaKnown RBP-3.6□□□□□ -2.99
SCARNA23-201ENST00000516060 E2F6O75461 281 aa-3.6□□□□□ -2.99
SCARNA23-201ENST00000516060 LSM6P62312 80 aaKnown RBP-3.6□□□□□ -2.99
SCARNA23-201ENST00000516060 Q6AWC8 147 aa-3.6□□□□□ -2.99
SCARNA23-201ENST00000516060 ZNF818PQ6ZRF7 136 aa-3.6□□□□□ -2.99
SCARNA23-201ENST00000516060 LINC00312Q9Y6C7 94 aa-3.6□□□□□ -2.99
SCARNA23-201ENST00000516060 ZFHX4Q86UP3 3567 aa-3.6□□□□□ -2.99
SCARNA23-201ENST00000516060 KDM5CP41229 1560 aa-3.6□□□□□ -2.99
SCARNA23-201ENST00000516060 BCORQ6W2J9 1755 aa-3.61□□□□□ -2.99
SCARNA23-201ENST00000516060 MGAQ8IWI9 3026 aa-3.61□□□□□ -2.99
SCARNA23-201ENST00000516060 J3QLW9 94 aa-3.61□□□□□ -2.99
SCARNA23-201ENST00000516060 S100A11P31949 105 aa-3.61□□□□□ -2.99
SCARNA23-201ENST00000516060 MARF1Q9Y4F3 1742 aaKnown RBP-3.61□□□□□ -2.99
SCARNA23-201ENST00000516060 PCF11O94913 1555 aaKnown RBP-3.62□□□□□ -2.99
SCARNA23-201ENST00000516060 CRIPTQ9P021 101 aa-3.62□□□□□ -2.99
SCARNA23-201ENST00000516060 SHANK2Q9UPX8 1470 aa-3.62□□□□□ -2.99
SCARNA23-201ENST00000516060 ADCY9O60503 1353 aa-3.63□□□□□ -2.99
SCARNA23-201ENST00000516060 IFNA17P01571 189 aa-3.63□□□□□ -2.99
SCARNA23-201ENST00000516060 TCRAP04437 139 aa-3.63□□□□□ -2.99
SCARNA23-201ENST00000516060 RPS17P08708 135 aaKnown RBP-3.63□□□□□ -2.99
SCARNA23-201ENST00000516060 CST2P09228 141 aa-3.63□□□□□ -2.99
SCARNA23-201ENST00000516060 RPL22P35268 128 aaKnown RBP-3.63□□□□□ -2.99
SCARNA23-201ENST00000516060 LINC01545Q5VT33 79 aa-3.63□□□□□ -2.99
SCARNA23-201ENST00000516060 ATP11AUNQ6ZP68 121 aa-3.63□□□□□ -2.99
SCARNA23-201ENST00000516060 ARMC1Q9NVT9 282 aa-3.63□□□□□ -2.99
SCARNA23-201ENST00000516060 YTHDC2Q9H6S0 1430 aaKnown RBP-3.63□□□□□ -2.99
SCARNA23-201ENST00000516060 ZCCHC11Q5TAX3 1644 aaKnown RBP-3.63□□□□□ -2.99
SCARNA23-201ENST00000516060 CSMD2Q7Z408 3487 aa-3.64□□□□□ -2.99
SCARNA23-201ENST00000516060 BORCS7-ASMTA0A0B4J1R7 106 aa-3.64□□□□□ -2.99
SCARNA23-201ENST00000516060 RPP14O95059 124 aaKnown RBP-3.64□□□□□ -2.99
SCARNA23-201ENST00000516060 SS18L2Q9UHA2 77 aa-3.64□□□□□ -2.99
SCARNA23-201ENST00000516060 A2MP01023 1474 aa-3.65□□□□□ -2.99
SCARNA23-201ENST00000516060 HSD11B1P28845 292 aa-3.65□□□□□ -2.99
SCARNA23-201ENST00000516060 WFDC13Q8IUB5 93 aa-3.65□□□□□ -2.99
SCARNA23-201ENST00000516060 DNAJC15Q9Y5T4 150 aa-3.65□□□□□ -2.99
SCARNA23-201ENST00000516060 V9GYH0 126 aa-3.65□□□□□ -2.99
SCARNA23-201ENST00000516060 RAPGEF6Q8TEU7 1601 aa-3.66□□□□□ -2.99
SCARNA23-201ENST00000516060 S100A5P33763 92 aa-3.66□□□□□ -3
SCARNA23-201ENST00000516060 KRTAP19-6Q3LI70 58 aa-3.66□□□□□ -3
SCARNA23-201ENST00000516060 BAGE2Q86Y30 109 aa-3.66□□□□□ -3
SCARNA23-201ENST00000516060 CDC42SE2Q9NRR3 84 aa-3.66□□□□□ -3
SCARNA23-201ENST00000516060 DISP2A7MBM2 1401 aa-3.67□□□□□ -3
SCARNA23-201ENST00000516060 UQCR11O14957 56 aa-3.67□□□□□ -3
SCARNA23-201ENST00000516060 DCUN1D2Q6PH85 259 aa-3.67□□□□□ -3
SCARNA23-201ENST00000516060 NKIRAS1Q9NYS0 192 aa-3.67□□□□□ -3
SCARNA23-201ENST00000516060 LAMTOR2Q9Y2Q5 125 aa-3.67□□□□□ -3
SCARNA23-201ENST00000516060 NWD2Q9ULI1 1742 aa-3.67□□□□□ -3
SCARNA23-201ENST00000516060 ATG12O94817 140 aa-3.68□□□□□ -3
SCARNA23-201ENST00000516060 UBE2G1P62253 170 aa-3.68□□□□□ -3
SCARNA23-201ENST00000516060 RPL7L1Q6DKI1 246 aaKnown RBP-3.68□□□□□ -3
SCARNA23-201ENST00000516060 SCIMPQ6UWF3 145 aa-3.68□□□□□ -3
SCARNA23-201ENST00000516060 MYH3P11055 1940 aa-3.68□□□□□ -3
SCARNA23-201ENST00000516060 APOC3P02656 99 aa-3.69□□□□□ -3
SCARNA23-201ENST00000516060 RBP4P02753 201 aa-3.69□□□□□ -3
SCARNA23-201ENST00000516060 RPL7P18124 248 aaKnown RBP-3.69□□□□□ -3
SCARNA23-201ENST00000516060 PSPHP78330 225 aa-3.69□□□□□ -3
SCARNA23-201ENST00000516060 SPANXN1Q5VSR9 72 aa-3.69□□□□□ -3
SCARNA23-201ENST00000516060 C10orf113Q5VZT2 155 aa-3.69□□□□□ -3
SCARNA23-201ENST00000516060 HEPN1Q6WQI6 88 aa-3.69□□□□□ -3
SCARNA23-201ENST00000516060 TMED4Q7Z7H5 227 aa-3.69□□□□□ -3
SCARNA23-201ENST00000516060 MRPL40Q9NQ50 206 aaKnown RBP-3.69□□□□□ -3
SCARNA23-201ENST00000516060 PRUNE2Q8WUY3 3088 aa-3.69□□□□□ -3
SCARNA23-201ENST00000516060 TRBV7-3A0A075B6L6 115 aa-3.7□□□□□ -3
SCARNA23-201ENST00000516060 A6NIN4 97 aa-3.7□□□□□ -3
SCARNA23-201ENST00000516060 I3L3M4 83 aa-3.7□□□□□ -3
SCARNA23-201ENST00000516060 TPPP2P59282 170 aa-3.7□□□□□ -3
SCARNA23-201ENST00000516060 SPA17Q15506 151 aa-3.7□□□□□ -3
SCARNA23-201ENST00000516060 AKAP14Q86UN6 197 aa-3.7□□□□□ -3
SCARNA23-201ENST00000516060 SPTSSBQ8NFR3 76 aa-3.7□□□□□ -3
SCARNA23-201ENST00000516060 FREM2Q5SZK8 3169 aa-3.71□□□□□ -3
SCARNA23-201ENST00000516060 RIMS1Q86UR5 1692 aaKnown RBP-3.71□□□□□ -3
SCARNA23-201ENST00000516060 BTAF1O14981 1849 aa-3.71□□□□□ -3
SCARNA23-201ENST00000516060 SMIM23A6NLE4 172 aa-3.71□□□□□ -3
SCARNA23-201ENST00000516060 BTG2P78543 158 aa-3.71□□□□□ -3
SCARNA23-201ENST00000516060 TMEM263Q8WUH6 116 aaKnown RBP-3.71□□□□□ -3
SCARNA23-201ENST00000516060 GINS3Q9BRX5 216 aa-3.71□□□□□ -3
SCARNA23-201ENST00000516060 CDKN2A-AS1Q9UH64 79 aa-3.71□□□□□ -3
SCARNA23-201ENST00000516060 LENEPQ9Y5L5 61 aa-3.71□□□□□ -3
SCARNA23-201ENST00000516060 CAMSAP1Q5T5Y3 1602 aa-3.71□□□□□ -3
SCARNA23-201ENST00000516060 ERCC6Q03468 1493 aa-3.72□□□□□ -3
SCARNA23-201ENST00000516060 CCDC141Q6ZP82 1450 aa-3.72□□□□□ -3
SCARNA23-201ENST00000516060 TRAV30A0A087WSZ9 112 aa-3.72□□□□□ -3
SCARNA23-201ENST00000516060 YPEL1O60688 119 aa-3.72□□□□□ -3
SCARNA23-201ENST00000516060 RPS28P62857 69 aaKnown RBP-3.72□□□□□ -3
SCARNA23-201ENST00000516060 CCL8P80075 99 aa-3.72□□□□□ -3
SCARNA23-201ENST00000516060 PRAP1Q96NZ9 151 aa-3.72□□□□□ -3
SCARNA23-201ENST00000516060 MED31Q9Y3C7 131 aa-3.72□□□□□ -3
SCARNA23-201ENST00000516060 MYH7P12883 1935 aa-3.72□□□□□ -3.01
SCARNA23-201ENST00000516060 A0A0G2JMZ2 1700 aa-3.73□□□□□ -3.01
SCARNA23-201ENST00000516060 DYDC1Q8WWB3 177 aa-3.73□□□□□ -3.01
SCARNA23-201ENST00000516060 ATP6V1DQ9Y5K8 247 aa-3.73□□□□□ -3.01
SCARNA23-201ENST00000516060 CDC42BPGQ6DT37 1551 aa-3.73□□□□□ -3.01
SCARNA23-201ENST00000516060 DAPK1P53355 1430 aa-3.74□□□□□ -3.01
SCARNA23-201ENST00000516060 CCL7P80098 99 aa-3.74□□□□□ -3.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms