RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ANGP03950 147 aaKnown RBP14.17□□□□□ -0.14
LSM6-207ENST00000515311 KLK12Q9UKR0 248 aa14.17□□□□□ -0.14
LSM6-207ENST00000515311 A0A096LNJ9 63 aa14.16□□□□□ -0.14
LSM6-207ENST00000515311 HBDP02042 147 aa14.16□□□□□ -0.14
LSM6-207ENST00000515311 NPSP0C0P6 89 aa14.16□□□□□ -0.14
LSM6-207ENST00000515311 COA6Q5JTJ3 125 aaKnown RBP14.16□□□□□ -0.14
LSM6-207ENST00000515311 CDC42SE2Q9NRR3 84 aa14.16□□□□□ -0.14
LSM6-207ENST00000515311 MRPS36P82909 103 aaKnown RBP14.15□□□□□ -0.14
LSM6-207ENST00000515311 ZNF664Q8N3J9 261 aa14.15□□□□□ -0.14
LSM6-207ENST00000515311 PRR34Q9NV39 138 aa14.15□□□□□ -0.14
LSM6-207ENST00000515311 IGIPA6NJ69 53 aa14.14□□□□□ -0.15
LSM6-207ENST00000515311 PMCHL1Q16048 86 aa14.14□□□□□ -0.15
LSM6-207ENST00000515311 ERASQ7Z444 233 aa14.14□□□□□ -0.15
LSM6-207ENST00000515311 LINC00269Q8N2A0 174 aa14.14□□□□□ -0.15
LSM6-207ENST00000515311 TIMM17AQ99595 171 aa14.14□□□□□ -0.15
LSM6-207ENST00000515311 DNAH6Q9C0G6 4158 aa14.13□□□□□ -0.15
LSM6-207ENST00000515311 M0R2N4 97 aa14.13□□□□□ -0.15
LSM6-207ENST00000515311 SACSQ9NZJ4 4579 aa14.12□□□□□ -0.15
LSM6-207ENST00000515311 TRAV8-3A0A0A6YYJ7 113 aa14.12□□□□□ -0.15
LSM6-207ENST00000515311 CRPP02741 224 aa14.12□□□□□ -0.15
LSM6-207ENST00000515311 REG3AQ06141 175 aa14.12□□□□□ -0.15
LSM6-207ENST00000515311 PDZD11Q5EBL8 140 aa14.12□□□□□ -0.15
LSM6-207ENST00000515311 Q6ZUT4 128 aa14.12□□□□□ -0.15
LSM6-207ENST00000515311 FAM104AQ969W3 186 aa14.12□□□□□ -0.15
LSM6-207ENST00000515311 TMEM141Q96I45 108 aa14.12□□□□□ -0.15
LSM6-207ENST00000515311 SCGB3A1Q96QR1 104 aa14.12□□□□□ -0.15
LSM6-207ENST00000515311 IGLV4-3A0A075B6K6 122 aa14.11□□□□□ -0.15
LSM6-207ENST00000515311 NUPR1O60356 82 aa14.11□□□□□ -0.15
LSM6-207ENST00000515311 ENHOQ6UWT2 76 aa14.11□□□□□ -0.15
LSM6-207ENST00000515311 UBE2WQ96B02 151 aa14.11□□□□□ -0.15
LSM6-207ENST00000515311 KMT2CQ8NEZ4 4911 aaKnown RBP14.11□□□□□ -0.15
LSM6-207ENST00000515311 NDUFA6P56556 154 aa14.1□□□□□ -0.15
LSM6-207ENST00000515311 MIAQ16674 131 aa14.1□□□□□ -0.15
LSM6-207ENST00000515311 PAPPA-AS1Q5QFB9 102 aa14.1□□□□□ -0.15
LSM6-207ENST00000515311 KMT2AQ03164 3969 aa14.09□□□□□ -0.15
LSM6-207ENST00000515311 CLPSL2Q6UWE3 100 aa14.09□□□□□ -0.15
LSM6-207ENST00000515311 Q6ZN92 141 aa14.09□□□□□ -0.15
LSM6-207ENST00000515311 FAM19A2Q8N3H0 131 aa14.09□□□□□ -0.15
LSM6-207ENST00000515311 OPRPNQ99935 248 aaPredicted RBP14.09□□□□□ -0.15
LSM6-207ENST00000515311 NFE4Q86UQ8 179 aa14.08□□□□□ -0.16
LSM6-207ENST00000515311 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.07□□□□□ -0.16
LSM6-207ENST00000515311 ATP5LO75964 103 aa14.07□□□□□ -0.16
LSM6-207ENST00000515311 RNASE13Q5GAN3 156 aaKnown RBP14.07□□□□□ -0.16
LSM6-207ENST00000515311 Q9HAA7 133 aa14.07□□□□□ -0.16
LSM6-207ENST00000515311 TRAV8-4A0A0B4J246 113 aa14.06□□□□□ -0.16
LSM6-207ENST00000515311 C6orf223Q8N319 242 aa14.06□□□□□ -0.16
LSM6-207ENST00000515311 RMI2Q96E14 147 aa14.06□□□□□ -0.16
LSM6-207ENST00000515311 AMELXQ99217 191 aa14.06□□□□□ -0.16
LSM6-207ENST00000515311 VCX2Q9H322 139 aa14.06□□□□□ -0.16
LSM6-207ENST00000515311 CCL25O15444 150 aa14.05□□□□□ -0.16
LSM6-207ENST00000515311 C1orf134Q5TEV5 83 aa14.05□□□□□ -0.16
LSM6-207ENST00000515311 TEX43Q6ZNM6 134 aa14.05□□□□□ -0.16
LSM6-207ENST00000515311 LINC00959A0A1B0GUT2 108 aa14.04□□□□□ -0.16
LSM6-207ENST00000515311 LINC00173Q6ZV60 143 aa14.04□□□□□ -0.16
LSM6-207ENST00000515311 C2orf88Q9BSF0 95 aa14.04□□□□□ -0.16
LSM6-207ENST00000515311 IGKV3OR2-268A0A0C4DH90 116 aa14.03□□□□□ -0.16
LSM6-207ENST00000515311 IFITM10A6NMD0 228 aa14.03□□□□□ -0.16
LSM6-207ENST00000515311 LEPROTL1O95214 131 aa14.03□□□□□ -0.16
LSM6-207ENST00000515311 S100A6P06703 90 aa14.03□□□□□ -0.16
LSM6-207ENST00000515311 BAALCQ8WXS3 180 aa14.03□□□□□ -0.16
LSM6-207ENST00000515311 C1orf43Q9BWL3 253 aa14.03□□□□□ -0.16
LSM6-207ENST00000515311 TM2D2Q9BX73 214 aa14.03□□□□□ -0.16
LSM6-207ENST00000515311 COX11Q9Y6N1 276 aa14.03□□□□□ -0.16
LSM6-207ENST00000515311 SS18Q15532 418 aa14.02□□□□□ -0.17
LSM6-207ENST00000515311 PACRGQ96M98 296 aaPredicted RBP14.02□□□□□ -0.17
LSM6-207ENST00000515311 HSPB8Q9UJY1 196 aa14.02□□□□□ -0.17
LSM6-207ENST00000515311 HYDINQ4G0P3 5121 aa14.01□□□□□ -0.17
LSM6-207ENST00000515311 IGKV2D-24A0A075B6R9 120 aa14.01□□□□□ -0.17
LSM6-207ENST00000515311 Q6ZRN7 208 aaPredicted RBP14.01□□□□□ -0.17
LSM6-207ENST00000515311 IFI27L1Q96BM0 104 aa14.01□□□□□ -0.17
LSM6-207ENST00000515311 IGLV10-54A0A075B6I4 117 aa14□□□□□ -0.17
LSM6-207ENST00000515311 TRAV13-1A0A0B4J241 112 aa14□□□□□ -0.17
LSM6-207ENST00000515311 PMVKQ15126 192 aa14□□□□□ -0.17
LSM6-207ENST00000515311 CST9LQ9H4G1 147 aa14□□□□□ -0.17
LSM6-207ENST00000515311 RYR2Q92736 4967 aa13.99□□□□□ -0.17
LSM6-207ENST00000515311 UBE2D1P51668 147 aa13.99□□□□□ -0.17
LSM6-207ENST00000515311 ZC2HC1BQ5TFG8 222 aa13.99□□□□□ -0.17
LSM6-207ENST00000515311 KRTAP26-1Q6PEX3 210 aa13.99□□□□□ -0.17
LSM6-207ENST00000515311 CHCHD10Q8WYQ3 142 aaPredicted RBP13.99□□□□□ -0.17
LSM6-207ENST00000515311 FABP4P15090 132 aa13.98□□□□□ -0.17
LSM6-207ENST00000515311 FAM19A3Q7Z5A8 133 aa13.97□□□□□ -0.17
LSM6-207ENST00000515311 PSCAO43653 123 aa13.96□□□□□ -0.17
LSM6-207ENST00000515311 PRSS1P07477 247 aa13.96□□□□□ -0.17
LSM6-207ENST00000515311 XCL1P47992 114 aa13.96□□□□□ -0.17
LSM6-207ENST00000515311 HIST3H2BBQ8N257 126 aa13.96□□□□□ -0.17
LSM6-207ENST00000515311 TRAV12-1A0A0B4J245 112 aa13.95□□□□□ -0.18
LSM6-207ENST00000515311 PRSS29PA6NIE9 313 aa13.95□□□□□ -0.18
LSM6-207ENST00000515311 RTL8CO15255 209 aa13.95□□□□□ -0.18
LSM6-207ENST00000515311 LINC00242Q5T6M2 205 aa13.95□□□□□ -0.18
LSM6-207ENST00000515311 CD164L2Q6UWJ8 174 aa13.95□□□□□ -0.18
LSM6-207ENST00000515311 GAGE12HA6NDE8 117 aa13.94□□□□□ -0.18
LSM6-207ENST00000515311 C5orf52A6NGY3 159 aa13.94□□□□□ -0.18
LSM6-207ENST00000515311 SNRPEP62304 92 aaKnown RBP13.94□□□□□ -0.18
LSM6-207ENST00000515311 SEC11AP67812 179 aa13.94□□□□□ -0.18
LSM6-207ENST00000515311 DNAH2Q9P225 4427 aa13.93□□□□□ -0.18
LSM6-207ENST00000515311 S100A2P29034 98 aa13.93□□□□□ -0.18
LSM6-207ENST00000515311 FOXI1Q12951 378 aa13.93□□□□□ -0.18
LSM6-207ENST00000515311 MAP1LC3CQ9BXW4 147 aa13.93□□□□□ -0.18
LSM6-207ENST00000515311 MAPKAPK5-AS1Q8N8E1 139 aa13.92□□□□□ -0.18
LSM6-207ENST00000515311 IGHV3OR16-9A0A0B4J2B5 98 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms