RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 FRAS1Q86XX4 4008 aa0.42□□□□□ -2.34
PHF3-211ENST00000514822 FAT3Q8TDW7 4589 aa0.42□□□□□ -2.34
PHF3-211ENST00000514822 TRGV1A0A0A0MS02 117 aa0.42□□□□□ -2.34
PHF3-211ENST00000514822 TNFP01375 233 aa0.42□□□□□ -2.34
PHF3-211ENST00000514822 S100A7L2Q5SY68 101 aa0.42□□□□□ -2.34
PHF3-211ENST00000514822 PP6455Q8WZ26 134 aa0.42□□□□□ -2.34
PHF3-211ENST00000514822 SPTBN5Q9NRC6 3674 aaKnown RBP0.42□□□□□ -2.34
PHF3-211ENST00000514822 NF1P21359 2839 aa0.42□□□□□ -2.34
PHF3-211ENST00000514822 AKAP11Q9UKA4 1901 aa0.41□□□□□ -2.34
PHF3-211ENST00000514822 ACANP16112 2415 aa0.41□□□□□ -2.34
PHF3-211ENST00000514822 A0A0D9SFI3 127 aa0.41□□□□□ -2.34
PHF3-211ENST00000514822 LOC285095A0A1B0GVY8 99 aa0.41□□□□□ -2.34
PHF3-211ENST00000514822 C10orf128Q5T292 105 aa0.41□□□□□ -2.34
PHF3-211ENST00000514822 LENEPQ9Y5L5 61 aa0.41□□□□□ -2.34
PHF3-211ENST00000514822 IER3IP1Q9Y5U9 82 aa0.41□□□□□ -2.34
PHF3-211ENST00000514822 C5orf42Q9H799 3197 aa0.41□□□□□ -2.34
PHF3-211ENST00000514822 BRCA2P51587 3418 aa0.41□□□□□ -2.34
PHF3-211ENST00000514822 KTN1Q86UP2 1357 aaKnown RBP0.41□□□□□ -2.34
PHF3-211ENST00000514822 PXDNQ92626 1479 aa0.41□□□□□ -2.34
PHF3-211ENST00000514822 SMG6Q86US8 1419 aaKnown RBP0.4□□□□□ -2.34
PHF3-211ENST00000514822 LAMB1P07942 1786 aa0.4□□□□□ -2.35
PHF3-211ENST00000514822 TANC1Q9C0D5 1861 aa0.4□□□□□ -2.35
PHF3-211ENST00000514822 USH2AO75445 5202 aa0.4□□□□□ -2.35
PHF3-211ENST00000514822 LRRC37A3O60309 1634 aa0.4□□□□□ -2.35
PHF3-211ENST00000514822 DLEU1O43261 78 aa0.4□□□□□ -2.35
PHF3-211ENST00000514822 PPP1R17O96001 155 aa0.4□□□□□ -2.35
PHF3-211ENST00000514822 SPINK8P0C7L1 97 aa0.4□□□□□ -2.35
PHF3-211ENST00000514822 UBE2DNLQ8IWF7 75 aa0.4□□□□□ -2.35
PHF3-211ENST00000514822 Q8N8P6 123 aa0.4□□□□□ -2.35
PHF3-211ENST00000514822 MYOZ3Q8TDC0 251 aa0.4□□□□□ -2.35
PHF3-211ENST00000514822 SMR3AQ99954 134 aa0.4□□□□□ -2.35
PHF3-211ENST00000514822 LAMC3Q9Y6N6 1575 aa0.4□□□□□ -2.35
PHF3-211ENST00000514822 RBBP6Q7Z6E9 1792 aaKnown RBP0.4□□□□□ -2.35
PHF3-211ENST00000514822 MYH9P35579 1960 aaKnown RBP0.39□□□□□ -2.35
PHF3-211ENST00000514822 TRAV1-2A0A0B4J238 106 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 FAM24AA6NFZ4 105 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 PRH1P02810 166 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 NMBP08949 121 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 GNG4P50150 75 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 TPPP2P59282 170 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 RBM3P98179 157 aaKnown RBP0.39□□□□□ -2.35
PHF3-211ENST00000514822 CATR1Q13166 79 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 WHAMMP3Q1A5X7 153 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 TTC9CQ8N5M4 171 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 AMELXQ99217 191 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 MGST2Q99735 147 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 SCN3BQ9NY72 215 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 F5P12259 2224 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 PDE4DIPQ5VU43 2346 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 WDR7Q9Y4E6 1490 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 CFAP54Q96N23 3096 aa0.39□□□□□ -2.35
PHF3-211ENST00000514822 PPIP5K1Q6PFW1 1433 aa0.38□□□□□ -2.35
PHF3-211ENST00000514822 BICRAQ9NZM4 1560 aa0.38□□□□□ -2.35
PHF3-211ENST00000514822 ROCK2O75116 1388 aaKnown RBP0.38□□□□□ -2.35
PHF3-211ENST00000514822 CLPSL1A2RUU4 121 aa0.38□□□□□ -2.35
PHF3-211ENST00000514822 MIF4GDA9UHW6 222 aaKnown RBP0.38□□□□□ -2.35
PHF3-211ENST00000514822 APOC3P02656 99 aa0.38□□□□□ -2.35
PHF3-211ENST00000514822 ATP5EP56381 51 aaPredicted RBP0.38□□□□□ -2.35
PHF3-211ENST00000514822 SPAG11BQ08648 103 aa0.38□□□□□ -2.35
PHF3-211ENST00000514822 COX17Q14061 63 aa0.38□□□□□ -2.35
PHF3-211ENST00000514822 MRPL54Q6P161 138 aaKnown RBP0.38□□□□□ -2.35
PHF3-211ENST00000514822 SPAG11AQ6PDA7 123 aa0.38□□□□□ -2.35
PHF3-211ENST00000514822 COMMD6Q7Z4G1 85 aa0.38□□□□□ -2.35
PHF3-211ENST00000514822 C5orf38Q86SI9 138 aa0.38□□□□□ -2.35
PHF3-211ENST00000514822 FAM213BQ8TBF2 198 aa0.38□□□□□ -2.35
PHF3-211ENST00000514822 NRXN2Q9P2S2 1712 aa0.38□□□□□ -2.35
PHF3-211ENST00000514822 CASKIN1Q8WXD9 1431 aa0.38□□□□□ -2.35
PHF3-211ENST00000514822 PLXNA1Q9UIW2 1896 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 PI4KAP42356 2102 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 BCL9LQ86UU0 1499 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 IGF2RP11717 2491 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 UBE2L5PA0A1B0GUS4 154 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 CORTO00230 105 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 SPINK1P00995 79 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 CCL18P55774 89 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 UBE2L3P68036 154 aaKnown RBP0.37□□□□□ -2.35
PHF3-211ENST00000514822 Q5BKY6 102 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 SVBPQ8N300 66 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 LSM10Q969L4 123 aaKnown RBP0.37□□□□□ -2.35
PHF3-211ENST00000514822 C2orf88Q9BSF0 95 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 CNFNQ9BYD5 112 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 KRTAP2-1Q9BYU5 128 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 DYNLRB1Q9NP97 96 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 HMGXB3Q12766 1538 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 TNCP24821 2201 aa0.37□□□□□ -2.35
PHF3-211ENST00000514822 MAP2P11137 1827 aaKnown RBP0.36□□□□□ -2.35
PHF3-211ENST00000514822 PHIPQ8WWQ0 1821 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 ASPMQ8IZT6 3477 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 SPTAN1Q13813 2472 aaKnown RBP0.36□□□□□ -2.35
PHF3-211ENST00000514822 TRBV7-3A0A075B6L6 115 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 H3BQ15 152 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 M0R135 149 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 UQCR11O14957 56 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 SNAPC5O75971 98 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 DCDP81605 110 aaKnown RBP0.36□□□□□ -2.35
PHF3-211ENST00000514822 TMEM170BQ5T4T1 132 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 CFAP126Q5VTH2 177 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 NPVFQ9HCQ7 196 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 GNG8Q9UK08 70 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 V9GYH0 126 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms