RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 LINC00959A0A1B0GUT2 108 aa7.65□□□□□ -1.18
SNHG4-208ENST00000514110 A8MWL6 223 aa7.65□□□□□ -1.18
SNHG4-208ENST00000514110 TMEM250H0YL14 139 aa7.65□□□□□ -1.18
SNHG4-208ENST00000514110 CCL25O15444 150 aa7.65□□□□□ -1.18
SNHG4-208ENST00000514110 TSHBP01222 138 aa7.65□□□□□ -1.18
SNHG4-208ENST00000514110 ESDP10768 282 aa7.65□□□□□ -1.18
SNHG4-208ENST00000514110 XCL1P47992 114 aa7.65□□□□□ -1.18
SNHG4-208ENST00000514110 CEBPGP53567 150 aa7.64□□□□□ -1.19
SNHG4-208ENST00000514110 PRR3P79522 188 aaKnown RBP7.64□□□□□ -1.19
SNHG4-208ENST00000514110 BTF3L4Q96K17 158 aa7.64□□□□□ -1.19
SNHG4-208ENST00000514110 ST20Q9HBF5 79 aa7.64□□□□□ -1.19
SNHG4-208ENST00000514110 TMEM242Q9NWH2 141 aa7.64□□□□□ -1.19
SNHG4-208ENST00000514110 CT83Q5H943 113 aa7.63□□□□□ -1.19
SNHG4-208ENST00000514110 ALKAL2Q6UX46 152 aa7.63□□□□□ -1.19
SNHG4-208ENST00000514110 TMEM101Q96IK0 257 aa7.63□□□□□ -1.19
SNHG4-208ENST00000514110 IGHV1-58A0A0C4DH39 117 aa7.62□□□□□ -1.19
SNHG4-208ENST00000514110 POLR2KP53803 58 aaKnown RBP7.62□□□□□ -1.19
SNHG4-208ENST00000514110 BLOC1S1P78537 153 aa7.62□□□□□ -1.19
SNHG4-208ENST00000514110 PET117Q6UWS5 81 aa7.62□□□□□ -1.19
SNHG4-208ENST00000514110 MRAP2Q96G30 205 aa7.62□□□□□ -1.19
SNHG4-208ENST00000514110 CARD19Q96LW7 228 aa7.62□□□□□ -1.19
SNHG4-208ENST00000514110 LINC01600Q96MT4 127 aa7.62□□□□□ -1.19
SNHG4-208ENST00000514110 TMEM191AQ9H0A3 160 aa7.62□□□□□ -1.19
SNHG4-208ENST00000514110 CDC42SE2Q9NRR3 84 aa7.62□□□□□ -1.19
SNHG4-208ENST00000514110 A0A1B0GUT8 65 aa7.61□□□□□ -1.19
SNHG4-208ENST00000514110 HIGD1CA8MV81 97 aa7.61□□□□□ -1.19
SNHG4-208ENST00000514110 RAB4AP20338 218 aa7.61□□□□□ -1.19
SNHG4-208ENST00000514110 SS18Q15532 418 aa7.61□□□□□ -1.19
SNHG4-208ENST00000514110 CD164L2Q6UWJ8 174 aa7.61□□□□□ -1.19
SNHG4-208ENST00000514110 MRPL52Q86TS9 123 aaKnown RBP7.61□□□□□ -1.19
SNHG4-208ENST00000514110 BORCS7Q96B45 105 aa7.61□□□□□ -1.19
SNHG4-208ENST00000514110 TRBV27A0A0K0K1C4 114 aa7.6□□□□□ -1.19
SNHG4-208ENST00000514110 LINC01551Q86U37 167 aa7.6□□□□□ -1.19
SNHG4-208ENST00000514110 AMN1Q8IY45 258 aa7.6□□□□□ -1.19
SNHG4-208ENST00000514110 ZNF664Q8N3J9 261 aa7.6□□□□□ -1.19
SNHG4-208ENST00000514110 TSKUQ8WUA8 353 aa7.6□□□□□ -1.19
SNHG4-208ENST00000514110 SMIM7Q9BQ49 75 aa7.6□□□□□ -1.19
SNHG4-208ENST00000514110 LINC00474Q9P2X8 69 aa7.6□□□□□ -1.19
SNHG4-208ENST00000514110 C7orf77A4D0Y5 90 aa7.59□□□□□ -1.19
SNHG4-208ENST00000514110 SMKR1H3BMG3 65 aa7.59□□□□□ -1.19
SNHG4-208ENST00000514110 ZNF561-AS1K7EIQ3 104 aa7.59□□□□□ -1.19
SNHG4-208ENST00000514110 SYCNQ0VAF6 134 aa7.59□□□□□ -1.19
SNHG4-208ENST00000514110 SLC7A5P1Q8MH63 180 aa7.59□□□□□ -1.19
SNHG4-208ENST00000514110 OSTCQ9NRP0 149 aa7.59□□□□□ -1.19
SNHG4-208ENST00000514110 AKAP14Q86UN6 197 aa7.58□□□□□ -1.2
SNHG4-208ENST00000514110 EIF5A2Q9GZV4 153 aaKnown RBP7.58□□□□□ -1.2
SNHG4-208ENST00000514110 PKIGQ9Y2B9 76 aa7.58□□□□□ -1.2
SNHG4-208ENST00000514110 IGLV4-69A0A075B6H9 119 aa7.57□□□□□ -1.2
SNHG4-208ENST00000514110 A0A0J9YXV3 536 aa7.57□□□□□ -1.2
SNHG4-208ENST00000514110 ZNF727A8MUV8 499 aa7.57□□□□□ -1.2
SNHG4-208ENST00000514110 CAMPP49913 170 aa7.57□□□□□ -1.2
SNHG4-208ENST00000514110 PTTG1IPP53801 180 aa7.57□□□□□ -1.2
SNHG4-208ENST00000514110 SRSF9Q13242 221 aaKnown RBP eCLIP7.57□□□□□ -1.2
SNHG4-208ENST00000514110 RNASE13Q5GAN3 156 aaKnown RBP7.57□□□□□ -1.2
SNHG4-208ENST00000514110 SPINK6Q6UWN8 80 aa7.57□□□□□ -1.2
SNHG4-208ENST00000514110 NRACQ8N912 160 aa7.57□□□□□ -1.2
SNHG4-208ENST00000514110 NUP35Q8NFH5 326 aa7.57□□□□□ -1.2
SNHG4-208ENST00000514110 V9GYV3 84 aa7.57□□□□□ -1.2
SNHG4-208ENST00000514110 VCYO14598 125 aa7.56□□□□□ -1.2
SNHG4-208ENST00000514110 SRP19P09132 144 aaKnown RBP7.56□□□□□ -1.2
SNHG4-208ENST00000514110 MALP21145 153 aa7.56□□□□□ -1.2
SNHG4-208ENST00000514110 FCER1GP30273 86 aa7.56□□□□□ -1.2
SNHG4-208ENST00000514110 KRTAP10-8P60410 259 aa7.56□□□□□ -1.2
SNHG4-208ENST00000514110 GAGE2BQ13066 116 aa7.56□□□□□ -1.2
SNHG4-208ENST00000514110 Q6ZRP5 223 aa7.56□□□□□ -1.2
SNHG4-208ENST00000514110 UBE2D4Q9Y2X8 147 aa7.56□□□□□ -1.2
SNHG4-208ENST00000514110 LRP2P98164 4655 aa7.55□□□□□ -1.2
SNHG4-208ENST00000514110 LOC107984640A0A0U1RRK4 108 aa7.55□□□□□ -1.2
SNHG4-208ENST00000514110 C1orf196B1AJZ1 125 aa7.55□□□□□ -1.2
SNHG4-208ENST00000514110 COX7A2LO14548 114 aa7.55□□□□□ -1.2
SNHG4-208ENST00000514110 SUMO2P61956 95 aaKnown RBP7.55□□□□□ -1.2
SNHG4-208ENST00000514110 RIGQ13278 110 aa7.55□□□□□ -1.2
SNHG4-208ENST00000514110 REG3GQ6UW15 175 aa7.55□□□□□ -1.2
SNHG4-208ENST00000514110 CSDC2Q9Y534 153 aaKnown RBP7.55□□□□□ -1.2
SNHG4-208ENST00000514110 TRAV13-1A0A0B4J241 112 aa7.54□□□□□ -1.2
SNHG4-208ENST00000514110 A0A1W2PNN7 141 aa7.54□□□□□ -1.2
SNHG4-208ENST00000514110 MRPL51Q4U2R6 128 aaKnown RBP7.54□□□□□ -1.2
SNHG4-208ENST00000514110 ISOC2Q96AB3 205 aa7.54□□□□□ -1.2
SNHG4-208ENST00000514110 Q6ZUT4 128 aa7.53□□□□□ -1.2
SNHG4-208ENST00000514110 C5orf38Q86SI9 138 aa7.53□□□□□ -1.2
SNHG4-208ENST00000514110 CAMK2N2Q96S95 79 aa7.53□□□□□ -1.2
SNHG4-208ENST00000514110 KIR2DL4Q99706 377 aa7.53□□□□□ -1.2
SNHG4-208ENST00000514110 A4D1N5 150 aa7.52□□□□□ -1.21
SNHG4-208ENST00000514110 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.52□□□□□ -1.21
SNHG4-208ENST00000514110 TNFRSF6BO95407 300 aa7.52□□□□□ -1.21
SNHG4-208ENST00000514110 APOMO95445 188 aa7.52□□□□□ -1.21
SNHG4-208ENST00000514110 PPP1R17O96001 155 aa7.52□□□□□ -1.21
SNHG4-208ENST00000514110 SMAGPQ0VAQ4 97 aa7.52□□□□□ -1.21
SNHG4-208ENST00000514110 FAM104BQ5XKR9 115 aa7.52□□□□□ -1.21
SNHG4-208ENST00000514110 C2orf48Q96LS8 159 aa7.52□□□□□ -1.21
SNHG4-208ENST00000514110 NAT8BQ9UHF3 227 aa7.52□□□□□ -1.21
SNHG4-208ENST00000514110 PPP1R2P9O14990 202 aa7.51□□□□□ -1.21
SNHG4-208ENST00000514110 RPL23P62829 140 aaKnown RBP7.51□□□□□ -1.21
SNHG4-208ENST00000514110 RPL39P62891 51 aaKnown RBP7.51□□□□□ -1.21
SNHG4-208ENST00000514110 RPL18AQ02543 176 aaKnown RBP7.51□□□□□ -1.21
SNHG4-208ENST00000514110 TMEM241Q24JQ0 296 aa7.51□□□□□ -1.21
SNHG4-208ENST00000514110 FAM104AQ969W3 186 aa7.51□□□□□ -1.21
SNHG4-208ENST00000514110 OPRPNQ99935 248 aaPredicted RBP7.51□□□□□ -1.21
SNHG4-208ENST00000514110 TIMM21Q9BVV7 248 aa7.51□□□□□ -1.21
SNHG4-208ENST00000514110 SMIM27A0A1W2PRY6 76 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms