RNA–Protein interactions for RNA: ENST00000514096.5

LIMCH1-219, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-219ENST00000514096 INS-IGF2F8WCM5 200 aa5.81□□□□□ -1.48
LIMCH1-219ENST00000514096 A0A0J9YWU9 116 aa5.81□□□□□ -1.48
LIMCH1-219ENST00000514096 OXTP01178 125 aa5.81□□□□□ -1.48
LIMCH1-219ENST00000514096 SPINK13Q1W4C9 94 aa5.81□□□□□ -1.48
LIMCH1-219ENST00000514096 C2orf83Q53S99 150 aa5.81□□□□□ -1.48
LIMCH1-219ENST00000514096 LINC00305Q7Z4B0 112 aa5.81□□□□□ -1.48
LIMCH1-219ENST00000514096 SMKR1H3BMG3 65 aa5.8□□□□□ -1.48
LIMCH1-219ENST00000514096 RHOHQ15669 191 aa5.8□□□□□ -1.48
LIMCH1-219ENST00000514096 FAM240AA0A1B0GVK7 77 aa5.8□□□□□ -1.48
LIMCH1-219ENST00000514096 HBDP02042 147 aa5.8□□□□□ -1.48
LIMCH1-219ENST00000514096 TWIST1Q15672 202 aa5.8□□□□□ -1.48
LIMCH1-219ENST00000514096 MAPKAPK5-AS1Q8N8E1 139 aa5.8□□□□□ -1.48
LIMCH1-219ENST00000514096 URB1-AS1Q96HZ7 61 aa5.8□□□□□ -1.48
LIMCH1-219ENST00000514096 CRYGDP07320 174 aa5.79□□□□□ -1.48
LIMCH1-219ENST00000514096 CKS2P33552 79 aa5.79□□□□□ -1.48
LIMCH1-219ENST00000514096 LINC01559Q495D7 138 aa5.79□□□□□ -1.48
LIMCH1-219ENST00000514096 MAP6D1Q9H9H5 199 aa5.79□□□□□ -1.48
LIMCH1-219ENST00000514096 P0C879 139 aa5.79□□□□□ -1.48
LIMCH1-219ENST00000514096 DEFB130BP0DP73 79 aa5.79□□□□□ -1.48
LIMCH1-219ENST00000514096 DEFB130AP0DP74 79 aa5.79□□□□□ -1.48
LIMCH1-219ENST00000514096 SPTSSBQ8NFR3 76 aa5.79□□□□□ -1.48
LIMCH1-219ENST00000514096 SLC25A2Q9BXI2 301 aa5.79□□□□□ -1.48
LIMCH1-219ENST00000514096 ATOX1O00244 68 aa5.79□□□□□ -1.48
LIMCH1-219ENST00000514096 LEPP41159 167 aa5.79□□□□□ -1.48
LIMCH1-219ENST00000514096 MIR17HGQ75NE6 70 aa5.79□□□□□ -1.48
LIMCH1-219ENST00000514096 PHLDA1Q8WV24 401 aaPredicted RBP5.79□□□□□ -1.48
LIMCH1-219ENST00000514096 TXNDC17Q9BRA2 123 aa5.79□□□□□ -1.48
LIMCH1-219ENST00000514096 CRXO43186 299 aaPredicted RBP5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 NANOS2P60321 138 aaKnown RBP5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 B9D2Q9BPU9 175 aa5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 DPH3P1Q9H4G8 78 aa5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 S100A4P26447 101 aaKnown RBP5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 LGALS9BQ3B8N2 356 aa5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 LINC01620Q4KN68 170 aa5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 C10orf113Q5VZT2 155 aa5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 LGALS9CQ6DKI2 356 aa5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 SDIM1Q6ZPB5 146 aa5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 DEFB104AQ8WTQ1 72 aa5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 TRGV9Q99603 122 aa5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 Q9H3A6 140 aa5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 ZFAND3Q9H8U3 227 aa5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 LY6G6CO95867 125 aa5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 EGFEM1PQ0D2K5 195 aa5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 DAZ2Q13117 558 aaKnown RBP5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 DAZ4Q86SG3 579 aaKnown RBP5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 DAZ3Q9NR90 486 aaKnown RBP5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 LINC00474Q9P2X8 69 aa5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 TP53TG1Q9Y2A0 90 aa5.78□□□□□ -1.48
LIMCH1-219ENST00000514096 SHANK2-AS3Q9BTD1 123 aa5.77□□□□□ -1.49
LIMCH1-219ENST00000514096 IGKV1D-37A0A075B6S9 117 aa5.77□□□□□ -1.49
LIMCH1-219ENST00000514096 D6R8Y8 96 aa5.77□□□□□ -1.49
LIMCH1-219ENST00000514096 H3BT86 120 aa5.77□□□□□ -1.49
LIMCH1-219ENST00000514096 CYSTM1Q9H1C7 97 aa5.77□□□□□ -1.49
LIMCH1-219ENST00000514096 COX6CP09669 75 aa5.77□□□□□ -1.49
LIMCH1-219ENST00000514096 RIGQ13278 110 aa5.77□□□□□ -1.49
LIMCH1-219ENST00000514096 ATXN8Q156A1 80 aa5.77□□□□□ -1.49
LIMCH1-219ENST00000514096 KLK9Q9UKQ9 250 aa5.77□□□□□ -1.49
LIMCH1-219ENST00000514096 SMIM27A0A1W2PRY6 76 aa5.76□□□□□ -1.49
LIMCH1-219ENST00000514096 BUB3O43684 328 aa5.76□□□□□ -1.49
LIMCH1-219ENST00000514096 CD164Q04900 197 aa5.76□□□□□ -1.49
LIMCH1-219ENST00000514096 SPANXCQ9NY87 97 aa5.76□□□□□ -1.49
LIMCH1-219ENST00000514096 CMYA5Q8N3K9 4069 aa5.76□□□□□ -1.49
LIMCH1-219ENST00000514096 TRBV19A0A075B6N1 114 aa5.76□□□□□ -1.49
LIMCH1-219ENST00000514096 LRCOL1A6NCL2 159 aa5.76□□□□□ -1.49
LIMCH1-219ENST00000514096 Q8TAT8 98 aa5.76□□□□□ -1.49
LIMCH1-219ENST00000514096 MRPL35Q9NZE8 188 aaKnown RBP5.76□□□□□ -1.49
LIMCH1-219ENST00000514096 ZNF580Q9UK33 172 aa5.76□□□□□ -1.49
LIMCH1-219ENST00000514096 TIMM9Q9Y5J7 89 aa5.76□□□□□ -1.49
LIMCH1-219ENST00000514096 MLST8Q9BVC4 326 aa5.75□□□□□ -1.49
LIMCH1-219ENST00000514096 A0A087WVE0 104 aa5.75□□□□□ -1.49
LIMCH1-219ENST00000514096 C9JCJ5 164 aa5.75□□□□□ -1.49
LIMCH1-219ENST00000514096 LGALS9O00182 355 aa5.75□□□□□ -1.49
LIMCH1-219ENST00000514096 IGHV3-53P01767 116 aa5.75□□□□□ -1.49
LIMCH1-219ENST00000514096 APOC4P55056 127 aa5.75□□□□□ -1.49
LIMCH1-219ENST00000514096 WWC2-AS2Q96NR7 200 aa5.75□□□□□ -1.49
LIMCH1-219ENST00000514096 TMEM167BQ9NRX6 74 aa5.75□□□□□ -1.49
LIMCH1-219ENST00000514096 M0R2N4 97 aa5.75□□□□□ -1.49
LIMCH1-219ENST00000514096 RBMY1CP0DJD4 496 aa5.75□□□□□ -1.49
LIMCH1-219ENST00000514096 IGKV2-40A0A087WW87 121 aaPredicted RBP5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 PRAC2D3DTV9 90 aa5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 IGKV2D-40P01614 121 aaPredicted RBP5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 RBMY1A1P0DJD3 496 aaKnown RBP5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 RBMY1FQ15415 496 aaKnown RBP5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 SMIM26A0A096LP01 95 aa5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 FAM19A1Q7Z5A9 133 aa5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 ZNF625Q96I27 306 aaPredicted RBP5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 TIMM17AQ99595 171 aa5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 PRO1854Q9UHT4 67 aa5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 LGALS3P17931 250 aaKnown RBP5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 PVRIGQ6DKI7 326 aa5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 PATE2Q6UY27 113 aa5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 PRNTQ86SH4 94 aa5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 MUC7Q8TAX7 377 aa5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 RPP21Q9H633 154 aaKnown RBP5.74□□□□□ -1.49
LIMCH1-219ENST00000514096 A0A096LPF7 62 aa5.73□□□□□ -1.49
LIMCH1-219ENST00000514096 A0A1B0GUT8 65 aa5.73□□□□□ -1.49
LIMCH1-219ENST00000514096 FXYD5Q96DB9 178 aa5.73□□□□□ -1.49
LIMCH1-219ENST00000514096 SLC50A1Q9BRV3 221 aa5.73□□□□□ -1.49
LIMCH1-219ENST00000514096 IGLV2-18A0A075B6J9 118 aa5.73□□□□□ -1.49
LIMCH1-219ENST00000514096 IGHV3-64A0A075B6Q5 118 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms