RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 CAMK2N2Q96S95 79 aa11.31□□□□□ -0.6
HMGCS1-206ENST00000511774 CDC42SE2Q9NRR3 84 aa11.31□□□□□ -0.6
HMGCS1-206ENST00000511774 BCL2L11O43521 198 aa11.3□□□□□ -0.6
HMGCS1-206ENST00000511774 EIF5AP63241 154 aaKnown RBP11.3□□□□□ -0.6
HMGCS1-206ENST00000511774 TWIST1Q15672 202 aa11.3□□□□□ -0.6
HMGCS1-206ENST00000511774 KRTAP7-1Q8IUC3 87 aa11.3□□□□□ -0.6
HMGCS1-206ENST00000511774 CNFNQ9BYD5 112 aa11.3□□□□□ -0.6
HMGCS1-206ENST00000511774 FSIP2Q5CZC0 6907 aa11.29□□□□□ -0.6
HMGCS1-206ENST00000511774 TSPAN13O95857 204 aa11.29□□□□□ -0.6
HMGCS1-206ENST00000511774 TSHBP01222 138 aa11.29□□□□□ -0.6
HMGCS1-206ENST00000511774 TMEM101Q96IK0 257 aa11.29□□□□□ -0.6
HMGCS1-206ENST00000511774 BTF3L4Q96K17 158 aa11.29□□□□□ -0.6
HMGCS1-206ENST00000511774 TRBV20OR9-2A0A075B6H5 130 aa11.28□□□□□ -0.6
HMGCS1-206ENST00000511774 CCL20P78556 96 aa11.28□□□□□ -0.6
HMGCS1-206ENST00000511774 UBE2D1P51668 147 aa11.27□□□□□ -0.61
HMGCS1-206ENST00000511774 C2orf48Q96LS8 159 aa11.27□□□□□ -0.61
HMGCS1-206ENST00000511774 TMEM242Q9NWH2 141 aa11.27□□□□□ -0.61
HMGCS1-206ENST00000511774 XKRY2A2RUG3 117 aa11.26□□□□□ -0.61
HMGCS1-206ENST00000511774 I3L3M4 83 aa11.26□□□□□ -0.61
HMGCS1-206ENST00000511774 COX7A2LO14548 114 aa11.26□□□□□ -0.61
HMGCS1-206ENST00000511774 MALP21145 153 aa11.26□□□□□ -0.61
HMGCS1-206ENST00000511774 EIF5AL1Q6IS14 154 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-206ENST00000511774 MRPL52Q86TS9 123 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-206ENST00000511774 TRAV1-1A0A0B4J248 108 aa11.25□□□□□ -0.61
HMGCS1-206ENST00000511774 ARPC5O15511 151 aa11.25□□□□□ -0.61
HMGCS1-206ENST00000511774 PMCHP20382 165 aa11.25□□□□□ -0.61
HMGCS1-206ENST00000511774 RPL13AP40429 203 aaKnown RBP11.25□□□□□ -0.61
HMGCS1-206ENST00000511774 RNASE7Q9H1E1 156 aaKnown RBP11.25□□□□□ -0.61
HMGCS1-206ENST00000511774 RNASE13Q5GAN3 156 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-206ENST00000511774 FAM19A5Q7Z5A7 132 aaPredicted RBP11.24□□□□□ -0.61
HMGCS1-206ENST00000511774 C5orf38Q86SI9 138 aa11.24□□□□□ -0.61
HMGCS1-206ENST00000511774 NUDT10Q8NFP7 164 aa11.24□□□□□ -0.61
HMGCS1-206ENST00000511774 NUDT11Q96G61 164 aa11.24□□□□□ -0.61
HMGCS1-206ENST00000511774 MRAP2Q96G30 205 aa11.23□□□□□ -0.61
HMGCS1-206ENST00000511774 TRBV6-5A0A0K0K1A5 114 aa11.22□□□□□ -0.61
HMGCS1-206ENST00000511774 H2AFB1P0C5Y9 115 aa11.22□□□□□ -0.61
HMGCS1-206ENST00000511774 GNG4P50150 75 aa11.22□□□□□ -0.61
HMGCS1-206ENST00000511774 SPAG11BQ08648 103 aa11.22□□□□□ -0.61
HMGCS1-206ENST00000511774 RNF151Q2KHN1 245 aa11.22□□□□□ -0.61
HMGCS1-206ENST00000511774 C10orf25Q5T742 122 aa11.22□□□□□ -0.61
HMGCS1-206ENST00000511774 GNG13Q9P2W3 67 aa11.22□□□□□ -0.61
HMGCS1-206ENST00000511774 C1orf196B1AJZ1 125 aa11.21□□□□□ -0.61
HMGCS1-206ENST00000511774 UMAD1C9J7I0 102 aa11.2□□□□□ -0.62
HMGCS1-206ENST00000511774 SMIM12Q96EX1 92 aa11.2□□□□□ -0.62
HMGCS1-206ENST00000511774 CARHSP1Q9Y2V2 147 aaKnown RBP11.2□□□□□ -0.62
HMGCS1-206ENST00000511774 RPP21Q9H633 154 aaKnown RBP11.19□□□□□ -0.62
HMGCS1-206ENST00000511774 TRAV13-1A0A0B4J241 112 aa11.18□□□□□ -0.62
HMGCS1-206ENST00000511774 SMLR1H3BR10 107 aa11.18□□□□□ -0.62
HMGCS1-206ENST00000511774 POLR2KP53803 58 aaKnown RBP11.18□□□□□ -0.62
HMGCS1-206ENST00000511774 MANBALQ9NQG1 85 aa11.18□□□□□ -0.62
HMGCS1-206ENST00000511774 MRPL35Q9NZE8 188 aaKnown RBP11.18□□□□□ -0.62
HMGCS1-206ENST00000511774 A0A087X002 238 aa11.17□□□□□ -0.62
HMGCS1-206ENST00000511774 C7orf77A4D0Y5 90 aa11.17□□□□□ -0.62
HMGCS1-206ENST00000511774 LCE2DQ5TA82 110 aaPredicted RBP11.17□□□□□ -0.62
HMGCS1-206ENST00000511774 TEX261Q6UWH6 196 aa11.17□□□□□ -0.62
HMGCS1-206ENST00000511774 TSKUQ8WUA8 353 aa11.17□□□□□ -0.62
HMGCS1-206ENST00000511774 CRCT1Q9UGL9 99 aa11.17□□□□□ -0.62
HMGCS1-206ENST00000511774 K7EN84 100 aa11.16□□□□□ -0.62
HMGCS1-206ENST00000511774 M0QXV9 152 aa11.16□□□□□ -0.62
HMGCS1-206ENST00000511774 UNQ6190/PRO20217Q6UXQ8 127 aa11.16□□□□□ -0.62
HMGCS1-206ENST00000511774 ST20Q9HBF5 79 aa11.16□□□□□ -0.62
HMGCS1-206ENST00000511774 TLX1NBP0CAT3 122 aa11.15□□□□□ -0.62
HMGCS1-206ENST00000511774 GAGE2EQ4V326 116 aa11.15□□□□□ -0.62
HMGCS1-206ENST00000511774 Q6ZUT4 128 aa11.15□□□□□ -0.62
HMGCS1-206ENST00000511774 RETNLBQ9BQ08 111 aa11.15□□□□□ -0.62
HMGCS1-206ENST00000511774 C6orf48Q9UBA6 75 aa11.15□□□□□ -0.62
HMGCS1-206ENST00000511774 GAGE2DQ9UEU5 116 aa11.15□□□□□ -0.62
HMGCS1-206ENST00000511774 UBE2D4Q9Y2X8 147 aa11.15□□□□□ -0.62
HMGCS1-206ENST00000511774 TRBV27A0A0K0K1C4 114 aa11.14□□□□□ -0.63
HMGCS1-206ENST00000511774 UBE2BP63146 152 aa11.14□□□□□ -0.63
HMGCS1-206ENST00000511774 SMIM15Q7Z3B0 74 aa11.13□□□□□ -0.63
HMGCS1-206ENST00000511774 OR10D4PQ8NGN7 298 aa11.13□□□□□ -0.63
HMGCS1-206ENST00000511774 ORAOV1Q8WV07 137 aa11.13□□□□□ -0.63
HMGCS1-206ENST00000511774 IMMP2LQ96T52 175 aa11.13□□□□□ -0.63
HMGCS1-206ENST00000511774 SMDT1Q9H4I9 107 aa11.13□□□□□ -0.63
HMGCS1-206ENST00000511774 MED9Q9NWA0 146 aa11.13□□□□□ -0.63
HMGCS1-206ENST00000511774 FAM104AQ969W3 186 aa11.12□□□□□ -0.63
HMGCS1-206ENST00000511774 CSDC2Q9Y534 153 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-206ENST00000511774 ZNF861PO60384 105 aa11.11□□□□□ -0.63
HMGCS1-206ENST00000511774 BIN3Q9NQY0 253 aa11.11□□□□□ -0.63
HMGCS1-206ENST00000511774 NDUFA1O15239 70 aa11.1□□□□□ -0.63
HMGCS1-206ENST00000511774 C9orf129Q5T035 196 aaKnown RBP11.1□□□□□ -0.63
HMGCS1-206ENST00000511774 OCC1Q8TAD7 63 aa11.1□□□□□ -0.63
HMGCS1-206ENST00000511774 ZNF345Q14585 488 aa11.09□□□□□ -0.63
HMGCS1-206ENST00000511774 IGHV3OR16-9A0A0B4J2B5 98 aa11.08□□□□□ -0.64
HMGCS1-206ENST00000511774 SMKR1H3BMG3 65 aa11.08□□□□□ -0.64
HMGCS1-206ENST00000511774 PDE6DO43924 150 aa11.08□□□□□ -0.64
HMGCS1-206ENST00000511774 FAM210AQ96ND0 272 aa11.08□□□□□ -0.64
HMGCS1-206ENST00000511774 F8WDY8 70 aa11.06□□□□□ -0.64
HMGCS1-206ENST00000511774 RAB4AP20338 218 aa11.06□□□□□ -0.64
HMGCS1-206ENST00000511774 KIAA0087Q14695 138 aa11.06□□□□□ -0.64
HMGCS1-206ENST00000511774 TMEM241Q24JQ0 296 aa11.06□□□□□ -0.64
HMGCS1-206ENST00000511774 ANAPC11Q9NYG5 84 aa11.06□□□□□ -0.64
HMGCS1-206ENST00000511774 KRTAP13-2Q52LG2 175 aa11.05□□□□□ -0.64
HMGCS1-206ENST00000511774 TYMSOSQ8TAI1 123 aa11.05□□□□□ -0.64
HMGCS1-206ENST00000511774 CDIP1Q9H305 208 aa11.05□□□□□ -0.64
HMGCS1-206ENST00000511774 FCER1GP30273 86 aa11.04□□□□□ -0.64
HMGCS1-206ENST00000511774 TPRXLQ17RH7 258 aa11.04□□□□□ -0.64
HMGCS1-206ENST00000511774 AMN1Q8IY45 258 aa11.04□□□□□ -0.64
HMGCS1-206ENST00000511774 NRACQ8N912 160 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms