RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 IGKV2-29A2NJV5 120 aaPredicted RBP6.12□□□□□ -1.43
NUP54-207ENST00000508583 REG3AQ06141 175 aa6.12□□□□□ -1.43
NUP54-207ENST00000508583 CDPF1Q6NVV7 123 aa6.12□□□□□ -1.43
NUP54-207ENST00000508583 MRPL52Q86TS9 123 aaKnown RBP6.12□□□□□ -1.43
NUP54-207ENST00000508583 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
NUP54-207ENST00000508583 SMCO4Q9NRQ5 59 aa6.12□□□□□ -1.43
NUP54-207ENST00000508583 CSDC2Q9Y534 153 aaKnown RBP6.12□□□□□ -1.43
NUP54-207ENST00000508583 FAT2Q9NYQ8 4349 aa6.12□□□□□ -1.43
NUP54-207ENST00000508583 HECTD4Q9Y4D8 3996 aa6.12□□□□□ -1.43
NUP54-207ENST00000508583 A0A087WTM6 91 aa6.11□□□□□ -1.43
NUP54-207ENST00000508583 C14orf177Q52M58 125 aa6.11□□□□□ -1.43
NUP54-207ENST00000508583 ORMDL2Q53FV1 153 aa6.11□□□□□ -1.43
NUP54-207ENST00000508583 ENHOQ6UWT2 76 aa6.11□□□□□ -1.43
NUP54-207ENST00000508583 SLC7A5P1Q8MH63 180 aa6.11□□□□□ -1.43
NUP54-207ENST00000508583 Q8N8P6 123 aa6.11□□□□□ -1.43
NUP54-207ENST00000508583 C20orf203Q8NBC4 194 aa6.11□□□□□ -1.43
NUP54-207ENST00000508583 DEFB104AQ8WTQ1 72 aa6.11□□□□□ -1.43
NUP54-207ENST00000508583 IGLV4-60A0A075B6I1 120 aa6.1□□□□□ -1.43
NUP54-207ENST00000508583 A0A1B0GVY2 172 aa6.1□□□□□ -1.43
NUP54-207ENST00000508583 CCL25O15444 150 aa6.1□□□□□ -1.43
NUP54-207ENST00000508583 FABP9Q0Z7S8 132 aa6.1□□□□□ -1.43
NUP54-207ENST00000508583 CLPSL2Q6UWE3 100 aa6.1□□□□□ -1.43
NUP54-207ENST00000508583 NTN5Q8WTR8 489 aaPredicted RBP6.1□□□□□ -1.43
NUP54-207ENST00000508583 TIMM21Q9BVV7 248 aa6.1□□□□□ -1.43
NUP54-207ENST00000508583 MRPL18Q9H0U6 180 aaKnown RBP6.1□□□□□ -1.43
NUP54-207ENST00000508583 SPANXA1Q9NS26 97 aa6.1□□□□□ -1.43
NUP54-207ENST00000508583 TRAPPC1Q9Y5R8 145 aa6.1□□□□□ -1.43
NUP54-207ENST00000508583 PKD1P98161 4303 aa6.1□□□□□ -1.43
NUP54-207ENST00000508583 DNAH17Q9UFH2 4485 aa6.09□□□□□ -1.43
NUP54-207ENST00000508583 TGIF2-C20orf24A0A0A6YYL0 155 aa6.09□□□□□ -1.43
NUP54-207ENST00000508583 LOC389332A0A1B0GUA5 103 aa6.09□□□□□ -1.43
NUP54-207ENST00000508583 LINC01549A6NIU2 74 aa6.09□□□□□ -1.43
NUP54-207ENST00000508583 ZNF664Q8N3J9 261 aa6.09□□□□□ -1.43
NUP54-207ENST00000508583 PRSS3P2Q8NHM4 247 aa6.09□□□□□ -1.43
NUP54-207ENST00000508583 KRTAP4-7Q9BYR0 210 aa6.09□□□□□ -1.43
NUP54-207ENST00000508583 C16orf90A8MZG2 172 aa6.08□□□□□ -1.44
NUP54-207ENST00000508583 IFI27P40305 119 aaPredicted RBP6.08□□□□□ -1.44
NUP54-207ENST00000508583 SS18Q15532 418 aa6.08□□□□□ -1.44
NUP54-207ENST00000508583 KIAA1644Q3SXP7 199 aa6.08□□□□□ -1.44
NUP54-207ENST00000508583 SPATA12Q7Z6I5 190 aa6.08□□□□□ -1.44
NUP54-207ENST00000508583 CDC42SE2Q9NRR3 84 aa6.08□□□□□ -1.44
NUP54-207ENST00000508583 CYSLTR1Q9Y271 337 aa6.08□□□□□ -1.44
NUP54-207ENST00000508583 UBE2D4Q9Y2X8 147 aa6.08□□□□□ -1.44
NUP54-207ENST00000508583 IGKV3OR2-268A0A0C4DH90 116 aa6.07□□□□□ -1.44
NUP54-207ENST00000508583 LRCOL1A6NCL2 159 aa6.07□□□□□ -1.44
NUP54-207ENST00000508583 C1orf196B1AJZ1 125 aa6.07□□□□□ -1.44
NUP54-207ENST00000508583 NPSP0C0P6 89 aa6.07□□□□□ -1.44
NUP54-207ENST00000508583 MRPS36P82909 103 aaKnown RBP6.07□□□□□ -1.44
NUP54-207ENST00000508583 PAPPA-AS1Q5QFB9 102 aa6.07□□□□□ -1.44
NUP54-207ENST00000508583 CFAP161Q6P656 301 aa6.07□□□□□ -1.44
NUP54-207ENST00000508583 Q6ZN92 141 aa6.07□□□□□ -1.44
NUP54-207ENST00000508583 FA2HQ7L5A8 372 aa6.07□□□□□ -1.44
NUP54-207ENST00000508583 Q8N814 137 aa6.07□□□□□ -1.44
NUP54-207ENST00000508583 ALKBH7Q9BT30 221 aaPredicted RBP6.07□□□□□ -1.44
NUP54-207ENST00000508583 PYGO1Q9Y3Y4 419 aa6.07□□□□□ -1.44
NUP54-207ENST00000508583 IGLV10-54A0A075B6I4 117 aa6.06□□□□□ -1.44
NUP54-207ENST00000508583 RAB5BP61020 215 aa6.06□□□□□ -1.44
NUP54-207ENST00000508583 CBLN2Q8IUK8 224 aa6.06□□□□□ -1.44
NUP54-207ENST00000508583 BAALCQ8WXS3 180 aa6.06□□□□□ -1.44
NUP54-207ENST00000508583 CHCHD10Q8WYQ3 142 aaPredicted RBP6.06□□□□□ -1.44
NUP54-207ENST00000508583 C2orf88Q9BSF0 95 aa6.06□□□□□ -1.44
NUP54-207ENST00000508583 IGLV5-52A0A0A0MRZ9 124 aa6.05□□□□□ -1.44
NUP54-207ENST00000508583 TMEM238LA0A1B0GVL6 79 aa6.05□□□□□ -1.44
NUP54-207ENST00000508583 RPL39P62891 51 aaKnown RBP6.05□□□□□ -1.44
NUP54-207ENST00000508583 C2orf66Q6UXQ4 117 aa6.05□□□□□ -1.44
NUP54-207ENST00000508583 YPEL4Q96NS1 127 aa6.05□□□□□ -1.44
NUP54-207ENST00000508583 AP5S1Q9NUS5 200 aa6.05□□□□□ -1.44
NUP54-207ENST00000508583 LINC00959A0A1B0GUT2 108 aa6.04□□□□□ -1.44
NUP54-207ENST00000508583 LECT2O14960 151 aa6.04□□□□□ -1.44
NUP54-207ENST00000508583 CD164L2Q6UWJ8 174 aa6.04□□□□□ -1.44
NUP54-207ENST00000508583 Q6ZUT4 128 aa6.04□□□□□ -1.44
NUP54-207ENST00000508583 TMEM141Q96I45 108 aa6.04□□□□□ -1.44
NUP54-207ENST00000508583 TRAV13-1A0A0B4J241 112 aa6.03□□□□□ -1.44
NUP54-207ENST00000508583 GAGE12HA6NDE8 117 aa6.03□□□□□ -1.44
NUP54-207ENST00000508583 LINC01546A6NGU7 62 aa6.03□□□□□ -1.44
NUP54-207ENST00000508583 IFITM10A6NMD0 228 aa6.03□□□□□ -1.44
NUP54-207ENST00000508583 USP17L23D6RBM5 183 aa6.03□□□□□ -1.44
NUP54-207ENST00000508583 XCL1P47992 114 aa6.03□□□□□ -1.44
NUP54-207ENST00000508583 KRTAP10-2P60368 255 aa6.03□□□□□ -1.44
NUP54-207ENST00000508583 TEX43Q6ZNM6 134 aa6.03□□□□□ -1.44
NUP54-207ENST00000508583 MAPKAPK5-AS1Q8N8E1 139 aa6.03□□□□□ -1.44
NUP54-207ENST00000508583 TOMM6Q96B49 74 aa6.03□□□□□ -1.44
NUP54-207ENST00000508583 TIMM17AQ99595 171 aa6.03□□□□□ -1.44
NUP54-207ENST00000508583 BIRC6Q9NR09 4857 aa6.03□□□□□ -1.44
NUP54-207ENST00000508583 IGLV4-3A0A075B6K6 122 aa6.02□□□□□ -1.45
NUP54-207ENST00000508583 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.02□□□□□ -1.45
NUP54-207ENST00000508583 APOMO95445 188 aa6.02□□□□□ -1.45
NUP54-207ENST00000508583 LINC00614P0C842 121 aa6.02□□□□□ -1.45
NUP54-207ENST00000508583 MALP21145 153 aa6.02□□□□□ -1.45
NUP54-207ENST00000508583 GCSHP23434 173 aa6.02□□□□□ -1.45
NUP54-207ENST00000508583 SEC11AP67812 179 aa6.02□□□□□ -1.45
NUP54-207ENST00000508583 KRTAP26-1Q6PEX3 210 aa6.02□□□□□ -1.45
NUP54-207ENST00000508583 ERASQ7Z444 233 aa6.02□□□□□ -1.45
NUP54-207ENST00000508583 C18orf32Q8TCD1 76 aa6.02□□□□□ -1.45
NUP54-207ENST00000508583 VCX2Q9H322 139 aa6.02□□□□□ -1.45
NUP54-207ENST00000508583 PKHD1P08F94 4074 aa6.02□□□□□ -1.45
NUP54-207ENST00000508583 DNAH11Q96DT5 4516 aa6.01□□□□□ -1.45
NUP54-207ENST00000508583 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.01□□□□□ -1.45
NUP54-207ENST00000508583 IGHV1-58A0A0C4DH39 117 aa6.01□□□□□ -1.45
NUP54-207ENST00000508583 hDV102S1A0JD36 115 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms