RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 SMAGPQ0VAQ4 97 aa10.09□□□□□ -0.79
CLDND1-211ENST00000506575 PNRC1Q12796 327 aaPredicted RBP10.09□□□□□ -0.79
CLDND1-211ENST00000506575 MRPL52Q86TS9 123 aaKnown RBP10.09□□□□□ -0.79
CLDND1-211ENST00000506575 C9orf163Q8N9P6 203 aa10.09□□□□□ -0.79
CLDND1-211ENST00000506575 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.08□□□□□ -0.8
CLDND1-211ENST00000506575 PLA2G1BP04054 148 aaKnown RBP10.08□□□□□ -0.8
CLDND1-211ENST00000506575 CNBPP62633 177 aaKnown RBP10.08□□□□□ -0.8
CLDND1-211ENST00000506575 LINC00528Q8N1L1 170 aa10.08□□□□□ -0.8
CLDND1-211ENST00000506575 C20orf78Q9BR46 151 aa10.08□□□□□ -0.8
CLDND1-211ENST00000506575 A0A1B0GXF2 115 aa10.07□□□□□ -0.8
CLDND1-211ENST00000506575 MT-ND4LP03901 98 aa10.07□□□□□ -0.8
CLDND1-211ENST00000506575 CLLU1Q5K131 121 aa10.07□□□□□ -0.8
CLDND1-211ENST00000506575 ATP5L2Q7Z4Y8 100 aa10.07□□□□□ -0.8
CLDND1-211ENST00000506575 CIRBP-AS1Q8TBR5 109 aa10.07□□□□□ -0.8
CLDND1-211ENST00000506575 TRBV24-1A0A075B6N3 115 aa10.06□□□□□ -0.8
CLDND1-211ENST00000506575 D6R8Y8 96 aa10.06□□□□□ -0.8
CLDND1-211ENST00000506575 TCAPO15273 167 aa10.06□□□□□ -0.8
CLDND1-211ENST00000506575 XCL1P47992 114 aa10.06□□□□□ -0.8
CLDND1-211ENST00000506575 SS18Q15532 418 aa10.06□□□□□ -0.8
CLDND1-211ENST00000506575 ZNF664Q8N3J9 261 aa10.06□□□□□ -0.8
CLDND1-211ENST00000506575 TMEM18Q96B42 140 aa10.06□□□□□ -0.8
CLDND1-211ENST00000506575 ANAPC16Q96DE5 110 aa10.06□□□□□ -0.8
CLDND1-211ENST00000506575 CDC42SE2Q9NRR3 84 aa10.06□□□□□ -0.8
CLDND1-211ENST00000506575 LINC00959A0A1B0GUT2 108 aa10.05□□□□□ -0.8
CLDND1-211ENST00000506575 CCL25O15444 150 aa10.05□□□□□ -0.8
CLDND1-211ENST00000506575 TNFRSF6BO95407 300 aa10.05□□□□□ -0.8
CLDND1-211ENST00000506575 PPBPP02775 128 aa10.05□□□□□ -0.8
CLDND1-211ENST00000506575 C15orf56Q8N910 161 aa10.05□□□□□ -0.8
CLDND1-211ENST00000506575 IGHV3-64A0A075B6Q5 118 aa10.04□□□□□ -0.8
CLDND1-211ENST00000506575 RPL32P62910 135 aaKnown RBP10.04□□□□□ -0.8
CLDND1-211ENST00000506575 FOXI1Q12951 378 aa10.04□□□□□ -0.8
CLDND1-211ENST00000506575 FLG2Q5D862 2391 aaPredicted RBP10.03□□□□□ -0.8
CLDND1-211ENST00000506575 HIGD2BQ4VC39 106 aa10.03□□□□□ -0.8
CLDND1-211ENST00000506575 SDIM1Q6ZPB5 146 aa10.03□□□□□ -0.8
CLDND1-211ENST00000506575 SMIM2Q9BVW6 85 aa10.03□□□□□ -0.8
CLDND1-211ENST00000506575 UBE2D4Q9Y2X8 147 aa10.03□□□□□ -0.8
CLDND1-211ENST00000506575 CSDC2Q9Y534 153 aaKnown RBP10.03□□□□□ -0.8
CLDND1-211ENST00000506575 DMBT1Q9UGM3 2413 aaPredicted RBP10.02□□□□□ -0.81
CLDND1-211ENST00000506575 PHOX2AO14813 284 aa10.02□□□□□ -0.81
CLDND1-211ENST00000506575 NPYP01303 97 aa10.02□□□□□ -0.81
CLDND1-211ENST00000506575 ORMDL3Q8N138 153 aa10.02□□□□□ -0.81
CLDND1-211ENST00000506575 GVQW2A0A096LPI5 108 aaPredicted RBP10.01□□□□□ -0.81
CLDND1-211ENST00000506575 SLPIP03973 132 aa10.01□□□□□ -0.81
CLDND1-211ENST00000506575 UQCC3Q6UW78 93 aa10.01□□□□□ -0.81
CLDND1-211ENST00000506575 TMEM136Q6ZRR5 245 aa10.01□□□□□ -0.81
CLDND1-211ENST00000506575 PRELID3AQ96N28 172 aa10.01□□□□□ -0.81
CLDND1-211ENST00000506575 C1orf196B1AJZ1 125 aa10□□□□□ -0.81
CLDND1-211ENST00000506575 RNASE13Q5GAN3 156 aaKnown RBP10□□□□□ -0.81
CLDND1-211ENST00000506575 CD164L2Q6UWJ8 174 aa10□□□□□ -0.81
CLDND1-211ENST00000506575 DPH3Q96FX2 82 aa10□□□□□ -0.81
CLDND1-211ENST00000506575 TIMM21Q9BVV7 248 aa10□□□□□ -0.81
CLDND1-211ENST00000506575 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10□□□□□ -0.81
CLDND1-211ENST00000506575 IGHV1-58A0A0C4DH39 117 aa9.99□□□□□ -0.81
CLDND1-211ENST00000506575 RAB5AP20339 215 aa9.99□□□□□ -0.81
CLDND1-211ENST00000506575 IFITM2Q01629 132 aa9.99□□□□□ -0.81
CLDND1-211ENST00000506575 MYCBP2O75592 4640 aa9.98□□□□□ -0.81
CLDND1-211ENST00000506575 TRAV13-1A0A0B4J241 112 aa9.98□□□□□ -0.81
CLDND1-211ENST00000506575 MALP21145 153 aa9.98□□□□□ -0.81
CLDND1-211ENST00000506575 RPL39P62891 51 aaKnown RBP9.98□□□□□ -0.81
CLDND1-211ENST00000506575 Q6ZUT4 128 aa9.98□□□□□ -0.81
CLDND1-211ENST00000506575 TMEM218A2RU14 115 aa9.97□□□□□ -0.81
CLDND1-211ENST00000506575 PANO1I0J062 215 aa9.97□□□□□ -0.81
CLDND1-211ENST00000506575 SPANXA1Q9NS26 97 aa9.97□□□□□ -0.81
CLDND1-211ENST00000506575 LAMTOR2Q9Y2Q5 125 aa9.97□□□□□ -0.81
CLDND1-211ENST00000506575 ZNF561-AS1K7EIQ3 104 aa9.96□□□□□ -0.82
CLDND1-211ENST00000506575 COX7A2LO14548 114 aa9.96□□□□□ -0.82
CLDND1-211ENST00000506575 CIRBPQ14011 172 aaKnown RBP9.96□□□□□ -0.82
CLDND1-211ENST00000506575 ADCYAP1P18509 176 aa9.95□□□□□ -0.82
CLDND1-211ENST00000506575 COX6A2Q02221 97 aa9.95□□□□□ -0.82
CLDND1-211ENST00000506575 IMMP2LQ96T52 175 aa9.95□□□□□ -0.82
CLDND1-211ENST00000506575 MAP1LC3AQ9H492 121 aa9.95□□□□□ -0.82
CLDND1-211ENST00000506575 PKIGQ9Y2B9 76 aa9.95□□□□□ -0.82
CLDND1-211ENST00000506575 LOC389332A0A1B0GUA5 103 aa9.94□□□□□ -0.82
CLDND1-211ENST00000506575 CHTF8P0CG12 524 aa9.94□□□□□ -0.82
CLDND1-211ENST00000506575 RPL37AP61513 92 aaKnown RBP9.94□□□□□ -0.82
CLDND1-211ENST00000506575 SPACA4Q8TDM5 124 aa9.94□□□□□ -0.82
CLDND1-211ENST00000506575 LINC00526Q96FQ7 95 aa9.94□□□□□ -0.82
CLDND1-211ENST00000506575 CTDSP1Q9GZU7 261 aa9.94□□□□□ -0.82
CLDND1-211ENST00000506575 PRSS47A8MTI9 375 aa9.93□□□□□ -0.82
CLDND1-211ENST00000506575 IFI27P40305 119 aaPredicted RBP9.93□□□□□ -0.82
CLDND1-211ENST00000506575 MRPS36P82909 103 aaKnown RBP9.93□□□□□ -0.82
CLDND1-211ENST00000506575 PRSS3P2Q8NHM4 247 aa9.93□□□□□ -0.82
CLDND1-211ENST00000506575 CARD19Q96LW7 228 aa9.93□□□□□ -0.82
CLDND1-211ENST00000506575 SEC11CQ9BY50 192 aa9.93□□□□□ -0.82
CLDND1-211ENST00000506575 A0A087WYN8 130 aa9.92□□□□□ -0.82
CLDND1-211ENST00000506575 IGKV2-24A0A0C4DH68 120 aa9.92□□□□□ -0.82
CLDND1-211ENST00000506575 IFITM10A6NMD0 228 aa9.92□□□□□ -0.82
CLDND1-211ENST00000506575 APOMO95445 188 aa9.92□□□□□ -0.82
CLDND1-211ENST00000506575 C5orf38Q86SI9 138 aa9.92□□□□□ -0.82
CLDND1-211ENST00000506575 COMMD7Q86VX2 200 aa9.92□□□□□ -0.82
CLDND1-211ENST00000506575 OPRPNQ99935 248 aaPredicted RBP9.92□□□□□ -0.82
CLDND1-211ENST00000506575 KRTAP10-4P60372 401 aaPredicted RBP9.91□□□□□ -0.82
CLDND1-211ENST00000506575 SYCNQ0VAF6 134 aa9.91□□□□□ -0.82
CLDND1-211ENST00000506575 MAJINQ3KP22 176 aa9.91□□□□□ -0.82
CLDND1-211ENST00000506575 Q8N8P6 123 aa9.91□□□□□ -0.82
CLDND1-211ENST00000506575 HERC1Q15751 4861 aa9.9□□□□□ -0.82
CLDND1-211ENST00000506575 IGLV4-69A0A075B6H9 119 aa9.9□□□□□ -0.82
CLDND1-211ENST00000506575 TRAV9-1A0A075B6T8 112 aa9.9□□□□□ -0.82
CLDND1-211ENST00000506575 J3QL48 77 aa9.9□□□□□ -0.82
CLDND1-211ENST00000506575 S100PP25815 95 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms