RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 VCX2Q9H322 139 aa8.63□□□□□ -1.03
LIN54-206ENST00000506560 E9PLD3 99 aa8.63□□□□□ -1.03
LIN54-206ENST00000506560 SAMD5Q5TGI4 173 aa8.63□□□□□ -1.03
LIN54-206ENST00000506560 DNAJC30Q96LL9 226 aa8.63□□□□□ -1.03
LIN54-206ENST00000506560 SMIM13P0DJ93 91 aa8.62□□□□□ -1.03
LIN54-206ENST00000506560 UBE2D3P61077 147 aa8.62□□□□□ -1.03
LIN54-206ENST00000506560 UBE2D2P62837 147 aa8.62□□□□□ -1.03
LIN54-206ENST00000506560 FHL2Q14192 279 aa8.62□□□□□ -1.03
LIN54-206ENST00000506560 TRGV4A0A0C4DH28 118 aa8.62□□□□□ -1.03
LIN54-206ENST00000506560 NHP2Q9NX24 153 aaKnown RBP8.62□□□□□ -1.03
LIN54-206ENST00000506560 HIGD1BQ9P298 99 aa8.62□□□□□ -1.03
LIN54-206ENST00000506560 FABP2P12104 132 aa8.61□□□□□ -1.03
LIN54-206ENST00000506560 ZNF22P17026 224 aaPredicted RBP8.61□□□□□ -1.03
LIN54-206ENST00000506560 RPL36AP83881 106 aaKnown RBP8.61□□□□□ -1.03
LIN54-206ENST00000506560 RPL36ALQ969Q0 106 aaKnown RBP8.61□□□□□ -1.03
LIN54-206ENST00000506560 AMELXQ99217 191 aa8.61□□□□□ -1.03
LIN54-206ENST00000506560 TENM3Q9P273 2699 aa8.61□□□□□ -1.03
LIN54-206ENST00000506560 LINC01549A6NIU2 74 aa8.61□□□□□ -1.03
LIN54-206ENST00000506560 PYGO1Q9Y3Y4 419 aa8.61□□□□□ -1.03
LIN54-206ENST00000506560 MYMXA0A1B0GTQ4 84 aa8.61□□□□□ -1.03
LIN54-206ENST00000506560 ZNF815PA8K554 130 aa8.6□□□□□ -1.03
LIN54-206ENST00000506560 IGHV4-30-4P0DP06 118 aa8.6□□□□□ -1.03
LIN54-206ENST00000506560 KRTAP10-11P60412 298 aa8.6□□□□□ -1.03
LIN54-206ENST00000506560 NFE4Q86UQ8 179 aa8.6□□□□□ -1.03
LIN54-206ENST00000506560 TRBV10-1A0A0K0K1A3 114 aa8.6□□□□□ -1.03
LIN54-206ENST00000506560 A8MZ25 164 aa8.6□□□□□ -1.03
LIN54-206ENST00000506560 G3V4G9 280 aa8.6□□□□□ -1.03
LIN54-206ENST00000506560 FAM222AQ5U5X8 452 aa8.6□□□□□ -1.03
LIN54-206ENST00000506560 OR5A1Q8NGJ0 315 aa8.6□□□□□ -1.03
LIN54-206ENST00000506560 TRAV8-3A0A0A6YYJ7 113 aa8.59□□□□□ -1.03
LIN54-206ENST00000506560 CEND1Q8N111 149 aa8.59□□□□□ -1.03
LIN54-206ENST00000506560 CELA1Q9UNI1 258 aa8.59□□□□□ -1.03
LIN54-206ENST00000506560 TM2D2Q9BX73 214 aa8.58□□□□□ -1.04
LIN54-206ENST00000506560 A0A096LPF7 62 aa8.58□□□□□ -1.04
LIN54-206ENST00000506560 IGHV4-28A0A0C4DH34 117 aa8.58□□□□□ -1.04
LIN54-206ENST00000506560 TMEM223A0PJW6 202 aa8.58□□□□□ -1.04
LIN54-206ENST00000506560 SPANXA1Q9NS26 97 aa8.58□□□□□ -1.04
LIN54-206ENST00000506560 NBEAL1Q6ZS30 2694 aa8.58□□□□□ -1.04
LIN54-206ENST00000506560 TRBV6-4A0A1B0GX49 114 aa8.57□□□□□ -1.04
LIN54-206ENST00000506560 SBSPONQ8IVN8 264 aa8.57□□□□□ -1.04
LIN54-206ENST00000506560 LINC00612Q8N6U2 182 aa8.57□□□□□ -1.04
LIN54-206ENST00000506560 MRPS36P82909 103 aaKnown RBP8.57□□□□□ -1.04
LIN54-206ENST00000506560 RPL24P83731 157 aaKnown RBP8.57□□□□□ -1.04
LIN54-206ENST00000506560 PAPPA-AS1Q5QFB9 102 aa8.57□□□□□ -1.04
LIN54-206ENST00000506560 DAZ4Q86SG3 579 aaKnown RBP8.57□□□□□ -1.04
LIN54-206ENST00000506560 C3orf56Q8N813 242 aa8.57□□□□□ -1.04
LIN54-206ENST00000506560 DAZ3Q9NR90 486 aaKnown RBP8.57□□□□□ -1.04
LIN54-206ENST00000506560 COX6A2Q02221 97 aa8.56□□□□□ -1.04
LIN54-206ENST00000506560 KIR2DL5BQ8NHK3 375 aa8.56□□□□□ -1.04
LIN54-206ENST00000506560 TEX48A0A1B0GUV7 120 aa8.56□□□□□ -1.04
LIN54-206ENST00000506560 WIPF1O43516 503 aa8.56□□□□□ -1.04
LIN54-206ENST00000506560 RETNQ9HD89 108 aa8.56□□□□□ -1.04
LIN54-206ENST00000506560 J3QQQ9 107 aa8.56□□□□□ -1.04
LIN54-206ENST00000506560 HERVK_113P61574 105 aa8.56□□□□□ -1.04
LIN54-206ENST00000506560 DGAT2L7PQ6IED9 249 aa8.56□□□□□ -1.04
LIN54-206ENST00000506560 SCGB1D4Q6XE38 83 aa8.56□□□□□ -1.04
LIN54-206ENST00000506560 HIST1H4GQ99525 98 aa8.56□□□□□ -1.04
LIN54-206ENST00000506560 IGLL5B9A064 214 aa8.55□□□□□ -1.04
LIN54-206ENST00000506560 SPINK8P0C7L1 97 aa8.55□□□□□ -1.04
LIN54-206ENST00000506560 Q8NAQ8 132 aa8.55□□□□□ -1.04
LIN54-206ENST00000506560 A0A0J9YY99 117 aa8.55□□□□□ -1.04
LIN54-206ENST00000506560 UBE2D1P51668 147 aa8.55□□□□□ -1.04
LIN54-206ENST00000506560 APOC4P55056 127 aa8.55□□□□□ -1.04
LIN54-206ENST00000506560 C12orf74Q32Q52 190 aa8.55□□□□□ -1.04
LIN54-206ENST00000506560 CDKN2A-AS1Q9UH64 79 aa8.55□□□□□ -1.04
LIN54-206ENST00000506560 TRAV13-1A0A0B4J241 112 aa8.54□□□□□ -1.04
LIN54-206ENST00000506560 GYPEP15421 78 aa8.54□□□□□ -1.04
LIN54-206ENST00000506560 GAGE6Q13070 117 aa8.54□□□□□ -1.04
LIN54-206ENST00000506560 IGHV3-30-3P0DP02 117 aa8.54□□□□□ -1.04
LIN54-206ENST00000506560 WFDC2Q14508 124 aa8.54□□□□□ -1.04
LIN54-206ENST00000506560 MTURNQ8N3F0 131 aa8.54□□□□□ -1.04
LIN54-206ENST00000506560 MGAM2Q2M2H8 2515 aa8.53□□□□□ -1.04
LIN54-206ENST00000506560 IGLV4-60A0A075B6I1 120 aa8.53□□□□□ -1.04
LIN54-206ENST00000506560 IGKV3OR2-268A0A0C4DH90 116 aa8.53□□□□□ -1.04
LIN54-206ENST00000506560 SMIM9A6NGZ8 99 aa8.53□□□□□ -1.04
LIN54-206ENST00000506560 H3BMG7 143 aa8.53□□□□□ -1.04
LIN54-206ENST00000506560 CRYBA4P53673 196 aa8.53□□□□□ -1.04
LIN54-206ENST00000506560 C10orf126Q8N4M7 172 aa8.53□□□□□ -1.04
LIN54-206ENST00000506560 TMEM243Q9BU79 118 aa8.53□□□□□ -1.04
LIN54-206ENST00000506560 DNAH3Q8TD57 4116 aa8.53□□□□□ -1.04
LIN54-206ENST00000506560 LGALS3P17931 250 aaKnown RBP8.52□□□□□ -1.05
LIN54-206ENST00000506560 LINC00242Q5T6M2 205 aa8.52□□□□□ -1.05
LIN54-206ENST00000506560 CDC42SE2Q9NRR3 84 aa8.52□□□□□ -1.05
LIN54-206ENST00000506560 TINCRA0A1B0GVN0 87 aa8.52□□□□□ -1.05
LIN54-206ENST00000506560 LEPROTO15243 131 aa8.52□□□□□ -1.05
LIN54-206ENST00000506560 PRB2P02812 416 aaPredicted RBP8.51□□□□□ -1.05
LIN54-206ENST00000506560 TAL2Q16559 108 aa8.51□□□□□ -1.05
LIN54-206ENST00000506560 VSIG2Q96IQ7 327 aa8.51□□□□□ -1.05
LIN54-206ENST00000506560 TIMM21Q9BVV7 248 aa8.51□□□□□ -1.05
LIN54-206ENST00000506560 TRBV6-8A0A0A6YYG3 113 aa8.51□□□□□ -1.05
LIN54-206ENST00000506560 HTN3P15516 51 aa8.51□□□□□ -1.05
LIN54-206ENST00000506560 RNF183Q96D59 192 aa8.51□□□□□ -1.05
LIN54-206ENST00000506560 GTSF1LQ9H1H1 148 aa8.51□□□□□ -1.05
LIN54-206ENST00000506560 UBE2L6O14933 153 aa8.5□□□□□ -1.05
LIN54-206ENST00000506560 SH2D6Q7Z4S9 175 aa8.5□□□□□ -1.05
LIN54-206ENST00000506560 Q8N3U1 123 aa8.5□□□□□ -1.05
LIN54-206ENST00000506560 CHCHD5Q9BSY4 110 aa8.5□□□□□ -1.05
LIN54-206ENST00000506560 GEMIN7Q9H840 131 aaKnown RBP8.5□□□□□ -1.05
LIN54-206ENST00000506560 TMEM238C9JI98 176 aa8.5□□□□□ -1.05
LIN54-206ENST00000506560 SRSF9Q13242 221 aaKnown RBP eCLIP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 3101.2 ms