RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 A0A1W2PRX2 142 aa11.55□□□□□ -0.56
DDX41-205ENST00000505081 ITPR3Q14573 2671 aa11.54□□□□□ -0.56
DDX41-205ENST00000505081 INSP01308 110 aa11.54□□□□□ -0.56
DDX41-205ENST00000505081 C4orf3Q8WVX3 66 aa11.54□□□□□ -0.56
DDX41-205ENST00000505081 A0A0U1RRA0 63 aa11.54□□□□□ -0.56
DDX41-205ENST00000505081 MIAQ16674 131 aa11.54□□□□□ -0.56
DDX41-205ENST00000505081 LINC00694P0DN24 101 aa11.53□□□□□ -0.56
DDX41-205ENST00000505081 ATXN8Q156A1 80 aa11.53□□□□□ -0.56
DDX41-205ENST00000505081 ZNF625Q96I27 306 aaPredicted RBP11.53□□□□□ -0.56
DDX41-205ENST00000505081 A0A1B0GV72 72 aa11.53□□□□□ -0.56
DDX41-205ENST00000505081 ODF3L2Q3SX64 289 aa11.53□□□□□ -0.56
DDX41-205ENST00000505081 RS1O15537 224 aa11.53□□□□□ -0.56
DDX41-205ENST00000505081 BEAN1Q3B7T3 259 aa11.53□□□□□ -0.56
DDX41-205ENST00000505081 CLEC2BQ92478 149 aa11.53□□□□□ -0.56
DDX41-205ENST00000505081 BBC3Q96PG8 261 aaPredicted RBP11.53□□□□□ -0.56
DDX41-205ENST00000505081 SPANXDQ9BXN6 97 aa11.53□□□□□ -0.56
DDX41-205ENST00000505081 SPANXCQ9NY87 97 aa11.53□□□□□ -0.56
DDX41-205ENST00000505081 ICOSQ9Y6W8 199 aa11.53□□□□□ -0.56
DDX41-205ENST00000505081 TEX49A0A1B0GTD5 131 aa11.52□□□□□ -0.57
DDX41-205ENST00000505081 DGAT2L7PQ6IED9 249 aa11.52□□□□□ -0.57
DDX41-205ENST00000505081 Q8N2B8 174 aa11.52□□□□□ -0.57
DDX41-205ENST00000505081 TMEM101Q96IK0 257 aa11.52□□□□□ -0.57
DDX41-205ENST00000505081 Q96MF0 132 aa11.52□□□□□ -0.57
DDX41-205ENST00000505081 TRGV1A0A0A0MS02 117 aa11.52□□□□□ -0.57
DDX41-205ENST00000505081 TRBV30A0A0K0K1B3 111 aa11.52□□□□□ -0.57
DDX41-205ENST00000505081 ZFAND6Q6FIF0 208 aa11.52□□□□□ -0.57
DDX41-205ENST00000505081 CIDEAO60543 219 aa11.51□□□□□ -0.57
DDX41-205ENST00000505081 C1orf158Q8N1D5 194 aa11.51□□□□□ -0.57
DDX41-205ENST00000505081 PIK3CD-AS1Q5SR53 167 aa11.5□□□□□ -0.57
DDX41-205ENST00000505081 DNAJC30Q96LL9 226 aa11.49□□□□□ -0.57
DDX41-205ENST00000505081 Q6ZTI0 123 aa11.49□□□□□ -0.57
DDX41-205ENST00000505081 FLNAP21333 2647 aaKnown RBP11.49□□□□□ -0.57
DDX41-205ENST00000505081 RPL13AP40429 203 aaKnown RBP11.48□□□□□ -0.57
DDX41-205ENST00000505081 LINC00242Q5T6M2 205 aa11.48□□□□□ -0.57
DDX41-205ENST00000505081 STHQ8IWL8 128 aa11.48□□□□□ -0.57
DDX41-205ENST00000505081 TRAV13-1A0A0B4J241 112 aa11.48□□□□□ -0.57
DDX41-205ENST00000505081 DEFB113Q30KQ7 82 aa11.48□□□□□ -0.57
DDX41-205ENST00000505081 TRBV10-2A0A0K0K1G8 114 aa11.47□□□□□ -0.57
DDX41-205ENST00000505081 NTM-AS1Q6ZSK4 140 aa11.47□□□□□ -0.57
DDX41-205ENST00000505081 Q9H8V8 135 aa11.47□□□□□ -0.57
DDX41-205ENST00000505081 H7C423 109 aa11.47□□□□□ -0.57
DDX41-205ENST00000505081 C2orf82Q6UX34 121 aa11.46□□□□□ -0.57
DDX41-205ENST00000505081 GAGE12JA6NER3 117 aa11.46□□□□□ -0.58
DDX41-205ENST00000505081 NDUFA1O15239 70 aa11.46□□□□□ -0.58
DDX41-205ENST00000505081 TIRAPP58753 221 aa11.46□□□□□ -0.58
DDX41-205ENST00000505081 GAGE4Q13068 117 aa11.46□□□□□ -0.58
DDX41-205ENST00000505081 GAGE5Q13069 117 aa11.46□□□□□ -0.58
DDX41-205ENST00000505081 IGLV5-45A0A087WSX0 123 aa11.45□□□□□ -0.58
DDX41-205ENST00000505081 M0QXV9 152 aa11.45□□□□□ -0.58
DDX41-205ENST00000505081 CRLF1O75462 422 aa11.45□□□□□ -0.58
DDX41-205ENST00000505081 CITED2Q99967 270 aaPredicted RBP11.45□□□□□ -0.58
DDX41-205ENST00000505081 ACANP16112 2415 aa11.45□□□□□ -0.58
DDX41-205ENST00000505081 MTORP42345 2549 aa11.45□□□□□ -0.58
DDX41-205ENST00000505081 WFDC10AQ9H1F0 79 aa11.45□□□□□ -0.58
DDX41-205ENST00000505081 TRAV26-1A0A087WT03 109 aa11.44□□□□□ -0.58
DDX41-205ENST00000505081 TMEM262E9PQX1 116 aa11.44□□□□□ -0.58
DDX41-205ENST00000505081 YAE1D1Q9NRH1 226 aa11.43□□□□□ -0.58
DDX41-205ENST00000505081 PLA2G2AP14555 144 aa11.43□□□□□ -0.58
DDX41-205ENST00000505081 SOSTDC1Q6X4U4 206 aa11.43□□□□□ -0.58
DDX41-205ENST00000505081 KRTAP1-3Q8IUG1 177 aa11.43□□□□□ -0.58
DDX41-205ENST00000505081 IL17DQ8TAD2 202 aa11.43□□□□□ -0.58
DDX41-205ENST00000505081 LINC00308Q8TCZ7 52 aa11.43□□□□□ -0.58
DDX41-205ENST00000505081 UBE2WQ96B02 151 aa11.43□□□□□ -0.58
DDX41-205ENST00000505081 NOP10Q9NPE3 64 aaKnown RBP11.43□□□□□ -0.58
DDX41-205ENST00000505081 SMIM1B2RUZ4 78 aa11.42□□□□□ -0.58
DDX41-205ENST00000505081 COX6CP09669 75 aa11.42□□□□□ -0.58
DDX41-205ENST00000505081 TRAV4A0A0B4J268 109 aa11.42□□□□□ -0.58
DDX41-205ENST00000505081 IGLV5-39A0A0G2JS06 123 aa11.42□□□□□ -0.58
DDX41-205ENST00000505081 K7EQD1 137 aa11.42□□□□□ -0.58
DDX41-205ENST00000505081 LOC100131303A0A0U1RQF7 123 aa11.42□□□□□ -0.58
DDX41-205ENST00000505081 DNAJC9-AS1A6NH13 148 aa11.42□□□□□ -0.58
DDX41-205ENST00000505081 TIMM17BO60830 172 aa11.42□□□□□ -0.58
DDX41-205ENST00000505081 HERVK_113P63121 156 aa11.42□□□□□ -0.58
DDX41-205ENST00000505081 RPL36AP83881 106 aaKnown RBP11.42□□□□□ -0.58
DDX41-205ENST00000505081 RPL36ALQ969Q0 106 aaKnown RBP11.42□□□□□ -0.58
DDX41-205ENST00000505081 RNF183Q96D59 192 aa11.42□□□□□ -0.58
DDX41-205ENST00000505081 CCL24O00175 119 aa11.41□□□□□ -0.58
DDX41-205ENST00000505081 LST1O00453 97 aa11.41□□□□□ -0.58
DDX41-205ENST00000505081 CITED1Q99966 193 aa11.41□□□□□ -0.58
DDX41-205ENST00000505081 ESM1Q9NQ30 184 aa11.41□□□□□ -0.58
DDX41-205ENST00000505081 TRAV8-4A0A0B4J246 113 aa11.4□□□□□ -0.58
DDX41-205ENST00000505081 IFITM1P13164 125 aa11.4□□□□□ -0.58
DDX41-205ENST00000505081 CIRBPQ14011 172 aaKnown RBP11.4□□□□□ -0.58
DDX41-205ENST00000505081 WFDC11Q8NEX6 87 aa11.39□□□□□ -0.59
DDX41-205ENST00000505081 MEIG1Q5JSS6 88 aa11.39□□□□□ -0.59
DDX41-205ENST00000505081 PRIMA1Q86XR5 153 aa11.39□□□□□ -0.59
DDX41-205ENST00000505081 TEX29Q8N6K0 151 aa11.39□□□□□ -0.59
DDX41-205ENST00000505081 CDC42SE2Q9NRR3 84 aa11.39□□□□□ -0.59
DDX41-205ENST00000505081 GIG44P09565 113 aaPredicted RBP11.39□□□□□ -0.59
DDX41-205ENST00000505081 GAGE7O76087 117 aa11.38□□□□□ -0.59
DDX41-205ENST00000505081 GAGE12FP0CL80 117 aa11.38□□□□□ -0.59
DDX41-205ENST00000505081 GAGE12GP0CL81 117 aa11.38□□□□□ -0.59
DDX41-205ENST00000505081 GAGE12IP0CL82 117 aa11.38□□□□□ -0.59
DDX41-205ENST00000505081 RPL35AP18077 110 aaKnown RBP11.38□□□□□ -0.59
DDX41-205ENST00000505081 ZNF843Q8N446 348 aa11.38□□□□□ -0.59
DDX41-205ENST00000505081 LINC01600Q96MT4 127 aa11.38□□□□□ -0.59
DDX41-205ENST00000505081 IGKV3OR2-268A0A0C4DH90 116 aa11.38□□□□□ -0.59
DDX41-205ENST00000505081 CLUHP3Q96NS8 147 aa11.38□□□□□ -0.59
DDX41-205ENST00000505081 F5H768 121 aa11.37□□□□□ -0.59
DDX41-205ENST00000505081 SNCGO76070 127 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms