RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 AMMECR1LQ6DCA0 310 aa6.47□□□□□ -1.37
TPM3-218ENST00000505010 CEMP1Q6PRD7 247 aaPredicted RBP6.47□□□□□ -1.37
TPM3-218ENST00000505010 PET117Q6UWS5 81 aa6.47□□□□□ -1.37
TPM3-218ENST00000505010 BAALCQ8WXS3 180 aa6.47□□□□□ -1.37
TPM3-218ENST00000505010 SPANXA1Q9NS26 97 aa6.47□□□□□ -1.37
TPM3-218ENST00000505010 UBE2D4Q9Y2X8 147 aa6.47□□□□□ -1.37
TPM3-218ENST00000505010 FGF6P10767 208 aa6.46□□□□□ -1.38
TPM3-218ENST00000505010 DGAT2L7PQ6IED9 249 aa6.46□□□□□ -1.38
TPM3-218ENST00000505010 Q8N976 141 aa6.46□□□□□ -1.38
TPM3-218ENST00000505010 OPRPNQ99935 248 aaPredicted RBP6.46□□□□□ -1.38
TPM3-218ENST00000505010 PMCHL2Q9BQD1 86 aa6.46□□□□□ -1.38
TPM3-218ENST00000505010 ABCA13Q86UQ4 5058 aa6.45□□□□□ -1.38
TPM3-218ENST00000505010 VPS13DQ5THJ4 4388 aa6.45□□□□□ -1.38
TPM3-218ENST00000505010 IGLV4-3A0A075B6K6 122 aa6.45□□□□□ -1.38
TPM3-218ENST00000505010 H7C423 109 aa6.45□□□□□ -1.38
TPM3-218ENST00000505010 RNASE13Q5GAN3 156 aaKnown RBP6.45□□□□□ -1.38
TPM3-218ENST00000505010 ZC2HC1BQ5TFG8 222 aa6.45□□□□□ -1.38
TPM3-218ENST00000505010 LINC01545Q5VT33 79 aa6.45□□□□□ -1.38
TPM3-218ENST00000505010 Q6ZUT4 128 aa6.45□□□□□ -1.38
TPM3-218ENST00000505010 C15orf53Q8NAA6 179 aa6.45□□□□□ -1.38
TPM3-218ENST00000505010 OR5A1Q8NGJ0 315 aa6.45□□□□□ -1.38
TPM3-218ENST00000505010 TIMM21Q9BVV7 248 aa6.45□□□□□ -1.38
TPM3-218ENST00000505010 PYGO1Q9Y3Y4 419 aa6.45□□□□□ -1.38
TPM3-218ENST00000505010 IGLL5B9A064 214 aa6.44□□□□□ -1.38
TPM3-218ENST00000505010 TMEM262E9PQX1 116 aa6.44□□□□□ -1.38
TPM3-218ENST00000505010 ODF1Q14990 250 aa6.44□□□□□ -1.38
TPM3-218ENST00000505010 PMVKQ15126 192 aa6.44□□□□□ -1.38
TPM3-218ENST00000505010 PAPPA-AS1Q5QFB9 102 aa6.44□□□□□ -1.38
TPM3-218ENST00000505010 LELP1Q5T871 98 aa6.44□□□□□ -1.38
TPM3-218ENST00000505010 LGALS9CQ6DKI2 356 aa6.44□□□□□ -1.38
TPM3-218ENST00000505010 CDPF1Q6NVV7 123 aa6.44□□□□□ -1.38
TPM3-218ENST00000505010 LYPD5Q6UWN5 251 aa6.44□□□□□ -1.38
TPM3-218ENST00000505010 MRPL52Q86TS9 123 aaKnown RBP6.44□□□□□ -1.38
TPM3-218ENST00000505010 ATOH7Q8N100 152 aa6.44□□□□□ -1.38
TPM3-218ENST00000505010 TMEM101Q96IK0 257 aa6.44□□□□□ -1.38
TPM3-218ENST00000505010 C12orf57Q99622 126 aa6.44□□□□□ -1.38
TPM3-218ENST00000505010 CHTOPQ9Y3Y2 248 aaKnown RBP6.44□□□□□ -1.38
TPM3-218ENST00000505010 A0A087WX48 190 aa6.43□□□□□ -1.38
TPM3-218ENST00000505010 TRAV12-1A0A0B4J245 112 aa6.43□□□□□ -1.38
TPM3-218ENST00000505010 NPSP0C0P6 89 aa6.43□□□□□ -1.38
TPM3-218ENST00000505010 ZNF25P17030 456 aaPredicted RBP6.43□□□□□ -1.38
TPM3-218ENST00000505010 TIRAPP58753 221 aa6.43□□□□□ -1.38
TPM3-218ENST00000505010 TEX43Q6ZNM6 134 aa6.43□□□□□ -1.38
TPM3-218ENST00000505010 LINC00518Q8N0U6 118 aa6.43□□□□□ -1.38
TPM3-218ENST00000505010 C2orf88Q9BSF0 95 aa6.43□□□□□ -1.38
TPM3-218ENST00000505010 VCX2Q9H322 139 aa6.43□□□□□ -1.38
TPM3-218ENST00000505010 CST9LQ9H4G1 147 aa6.43□□□□□ -1.38
TPM3-218ENST00000505010 TRAV8-6A0A0B4J262 113 aa6.42□□□□□ -1.38
TPM3-218ENST00000505010 PRSS29PA6NIE9 313 aa6.42□□□□□ -1.38
TPM3-218ENST00000505010 F8VRH5 84 aa6.42□□□□□ -1.38
TPM3-218ENST00000505010 DPM2O94777 84 aa6.42□□□□□ -1.38
TPM3-218ENST00000505010 PKIAP61925 76 aa6.42□□□□□ -1.38
TPM3-218ENST00000505010 MRPS36P82909 103 aaKnown RBP6.42□□□□□ -1.38
TPM3-218ENST00000505010 MPV17L2Q567V2 206 aa6.42□□□□□ -1.38
TPM3-218ENST00000505010 FAM104AQ969W3 186 aa6.42□□□□□ -1.38
TPM3-218ENST00000505010 MRPL35Q9NZE8 188 aaKnown RBP6.42□□□□□ -1.38
TPM3-218ENST00000505010 NUPR2A6NF83 97 aa6.41□□□□□ -1.38
TPM3-218ENST00000505010 IGKCP01834 107 aa6.41□□□□□ -1.38
TPM3-218ENST00000505010 RBX1P62877 108 aa6.41□□□□□ -1.38
TPM3-218ENST00000505010 S100A12P80511 92 aa6.41□□□□□ -1.38
TPM3-218ENST00000505010 ESRGQ1W209 222 aa6.41□□□□□ -1.38
TPM3-218ENST00000505010 ZNF664Q8N3J9 261 aa6.41□□□□□ -1.38
TPM3-218ENST00000505010 AMELXQ99217 191 aa6.41□□□□□ -1.38
TPM3-218ENST00000505010 VAMP8Q9BV40 100 aa6.41□□□□□ -1.38
TPM3-218ENST00000505010 CSDC2Q9Y534 153 aaKnown RBP6.41□□□□□ -1.38
TPM3-218ENST00000505010 IGLV4-69A0A075B6H9 119 aa6.4□□□□□ -1.38
TPM3-218ENST00000505010 IGLV4-60A0A075B6I1 120 aa6.4□□□□□ -1.38
TPM3-218ENST00000505010 IGKV3OR2-268A0A0C4DH90 116 aa6.4□□□□□ -1.38
TPM3-218ENST00000505010 PLNP26678 52 aa6.4□□□□□ -1.38
TPM3-218ENST00000505010 WFDC10BQ8IUB3 73 aa6.4□□□□□ -1.38
TPM3-218ENST00000505010 Q8N3U1 123 aa6.4□□□□□ -1.38
TPM3-218ENST00000505010 CHAC1Q9BUX1 264 aa6.4□□□□□ -1.38
TPM3-218ENST00000505010 CDC42SE2Q9NRR3 84 aa6.4□□□□□ -1.38
TPM3-218ENST00000505010 PAM16Q9Y3D7 125 aa6.4□□□□□ -1.38
TPM3-218ENST00000505010 PKHD1P08F94 4074 aa6.4□□□□□ -1.39
TPM3-218ENST00000505010 A0A0J9YXV3 536 aa6.39□□□□□ -1.39
TPM3-218ENST00000505010 hDV102S1A0JD36 115 aa6.39□□□□□ -1.39
TPM3-218ENST00000505010 C11orf86A6NJI1 115 aa6.39□□□□□ -1.39
TPM3-218ENST00000505010 HSBP1L1C9JCN9 74 aa6.39□□□□□ -1.39
TPM3-218ENST00000505010 MAJINQ3KP22 176 aa6.39□□□□□ -1.39
TPM3-218ENST00000505010 CLPSL2Q6UWE3 100 aa6.39□□□□□ -1.39
TPM3-218ENST00000505010 KLK5Q9Y337 293 aaPredicted RBP6.39□□□□□ -1.39
TPM3-218ENST00000505010 TRAV9-2A0A087WT02 112 aa6.38□□□□□ -1.39
TPM3-218ENST00000505010 TRAV13-1A0A0B4J241 112 aa6.38□□□□□ -1.39
TPM3-218ENST00000505010 A0A1B0GUV1 79 aa6.38□□□□□ -1.39
TPM3-218ENST00000505010 IGHV3-30P01768 117 aa6.38□□□□□ -1.39
TPM3-218ENST00000505010 IGHV3-33P01772 117 aa6.38□□□□□ -1.39
TPM3-218ENST00000505010 ANGP03950 147 aaKnown RBP6.38□□□□□ -1.39
TPM3-218ENST00000505010 IGLC3P0DOY3 106 aa6.38□□□□□ -1.39
TPM3-218ENST00000505010 IGHV3-30-3P0DP02 117 aa6.38□□□□□ -1.39
TPM3-218ENST00000505010 IGHV3-30-5P0DP03 117 aa6.38□□□□□ -1.39
TPM3-218ENST00000505010 UBE2D1P51668 147 aa6.38□□□□□ -1.39
TPM3-218ENST00000505010 CCL18P55774 89 aa6.38□□□□□ -1.39
TPM3-218ENST00000505010 TCTAP57738 103 aa6.38□□□□□ -1.39
TPM3-218ENST00000505010 SPATA45Q537H7 98 aa6.38□□□□□ -1.39
TPM3-218ENST00000505010 MRPS16Q9Y3D3 137 aaKnown RBP6.38□□□□□ -1.39
TPM3-218ENST00000505010 LCE2DQ5TA82 110 aaPredicted RBP6.37□□□□□ -1.39
TPM3-218ENST00000505010 NFE4Q86UQ8 179 aa6.37□□□□□ -1.39
TPM3-218ENST00000505010 UBE2DNLQ8IWF7 75 aa6.37□□□□□ -1.39
TPM3-218ENST00000505010 GEMIN7Q9H840 131 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms