RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.77□□□□□ -1.01
HOXC6-203ENST00000504315 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.76□□□□□ -1.01
HOXC6-203ENST00000504315 LINC00862A6NCI5 91 aa8.76□□□□□ -1.01
HOXC6-203ENST00000504315 PANO1I0J062 215 aa8.76□□□□□ -1.01
HOXC6-203ENST00000504315 VCYO14598 125 aa8.76□□□□□ -1.01
HOXC6-203ENST00000504315 PPP1R2P9O14990 202 aa8.76□□□□□ -1.01
HOXC6-203ENST00000504315 FOXI1Q12951 378 aa8.76□□□□□ -1.01
HOXC6-203ENST00000504315 CFAP161Q6P656 301 aa8.76□□□□□ -1.01
HOXC6-203ENST00000504315 BTF3L4Q96K17 158 aa8.76□□□□□ -1.01
HOXC6-203ENST00000504315 CDC42SE2Q9NRR3 84 aa8.76□□□□□ -1.01
HOXC6-203ENST00000504315 CSDC2Q9Y534 153 aaKnown RBP8.76□□□□□ -1.01
HOXC6-203ENST00000504315 TRBV24-1A0A075B6N3 115 aa8.75□□□□□ -1.01
HOXC6-203ENST00000504315 GVQW2A0A096LPI5 108 aaPredicted RBP8.75□□□□□ -1.01
HOXC6-203ENST00000504315 LINC00959A0A1B0GUT2 108 aa8.75□□□□□ -1.01
HOXC6-203ENST00000504315 A0A1B0GXF2 115 aa8.75□□□□□ -1.01
HOXC6-203ENST00000504315 RPL32P62910 135 aaKnown RBP8.75□□□□□ -1.01
HOXC6-203ENST00000504315 TMEM101Q96IK0 257 aa8.75□□□□□ -1.01
HOXC6-203ENST00000504315 IGHV3-64A0A075B6Q5 118 aa8.74□□□□□ -1.01
HOXC6-203ENST00000504315 CAMPP49913 170 aa8.74□□□□□ -1.01
HOXC6-203ENST00000504315 KIR2DL4Q99706 377 aa8.74□□□□□ -1.01
HOXC6-203ENST00000504315 C20orf78Q9BR46 151 aa8.74□□□□□ -1.01
HOXC6-203ENST00000504315 HERC1Q15751 4861 aa8.73□□□□□ -1.01
HOXC6-203ENST00000504315 PKHD1L1Q86WI1 4243 aa8.73□□□□□ -1.01
HOXC6-203ENST00000504315 S100A8P05109 93 aa8.73□□□□□ -1.01
HOXC6-203ENST00000504315 HBBP68871 147 aa8.73□□□□□ -1.01
HOXC6-203ENST00000504315 ZNF664Q8N3J9 261 aa8.73□□□□□ -1.01
HOXC6-203ENST00000504315 UBE2D4Q9Y2X8 147 aa8.73□□□□□ -1.01
HOXC6-203ENST00000504315 CCL25O15444 150 aa8.72□□□□□ -1.01
HOXC6-203ENST00000504315 FCER1GP30273 86 aa8.72□□□□□ -1.01
HOXC6-203ENST00000504315 MRPL54Q6P161 138 aaKnown RBP8.72□□□□□ -1.01
HOXC6-203ENST00000504315 KRTAP29-1A8MX34 341 aaPredicted RBP8.71□□□□□ -1.02
HOXC6-203ENST00000504315 F8W036 122 aa8.71□□□□□ -1.02
HOXC6-203ENST00000504315 PHOX2AO14813 284 aa8.71□□□□□ -1.02
HOXC6-203ENST00000504315 XCL1P47992 114 aa8.71□□□□□ -1.02
HOXC6-203ENST00000504315 SMAGPQ0VAQ4 97 aa8.71□□□□□ -1.02
HOXC6-203ENST00000504315 PNRC1Q12796 327 aaPredicted RBP8.71□□□□□ -1.02
HOXC6-203ENST00000504315 SS18Q15532 418 aa8.71□□□□□ -1.02
HOXC6-203ENST00000504315 HIGD2BQ4VC39 106 aa8.71□□□□□ -1.02
HOXC6-203ENST00000504315 CD164L2Q6UWJ8 174 aa8.71□□□□□ -1.02
HOXC6-203ENST00000504315 ATP5L2Q7Z4Y8 100 aa8.71□□□□□ -1.02
HOXC6-203ENST00000504315 SPACA4Q8TDM5 124 aa8.71□□□□□ -1.02
HOXC6-203ENST00000504315 TIMM21Q9BVV7 248 aa8.71□□□□□ -1.02
HOXC6-203ENST00000504315 IGHV1-58A0A0C4DH39 117 aa8.7□□□□□ -1.02
HOXC6-203ENST00000504315 TCAPO15273 167 aa8.7□□□□□ -1.02
HOXC6-203ENST00000504315 TNFRSF6BO95407 300 aa8.7□□□□□ -1.02
HOXC6-203ENST00000504315 PPBPP02775 128 aa8.7□□□□□ -1.02
HOXC6-203ENST00000504315 CKS2P33552 79 aa8.7□□□□□ -1.02
HOXC6-203ENST00000504315 SMIM2Q9BVW6 85 aa8.7□□□□□ -1.02
HOXC6-203ENST00000504315 D6R8Y8 96 aa8.69□□□□□ -1.02
HOXC6-203ENST00000504315 CHTF8P0CG12 524 aa8.69□□□□□ -1.02
HOXC6-203ENST00000504315 RPL37AP61513 92 aaKnown RBP8.69□□□□□ -1.02
HOXC6-203ENST00000504315 TMEM18Q96B42 140 aa8.69□□□□□ -1.02
HOXC6-203ENST00000504315 A0A087WYN8 130 aa8.68□□□□□ -1.02
HOXC6-203ENST00000504315 C1orf196B1AJZ1 125 aa8.68□□□□□ -1.02
HOXC6-203ENST00000504315 NPYP01303 97 aa8.68□□□□□ -1.02
HOXC6-203ENST00000504315 RAB14P61106 215 aa8.68□□□□□ -1.02
HOXC6-203ENST00000504315 ANAPC16Q96DE5 110 aa8.68□□□□□ -1.02
HOXC6-203ENST00000504315 COX6A2Q02221 97 aa8.67□□□□□ -1.02
HOXC6-203ENST00000504315 CLLU1Q5K131 121 aa8.67□□□□□ -1.02
HOXC6-203ENST00000504315 Q6ZUT4 128 aa8.67□□□□□ -1.02
HOXC6-203ENST00000504315 PRSS3P2Q8NHM4 247 aa8.67□□□□□ -1.02
HOXC6-203ENST00000504315 FAM104AQ969W3 186 aa8.67□□□□□ -1.02
HOXC6-203ENST00000504315 PLAC8Q9NZF1 115 aa8.67□□□□□ -1.02
HOXC6-203ENST00000504315 LRP1Q07954 4544 aaKnown RBP8.66□□□□□ -1.02
HOXC6-203ENST00000504315 ORMDL3Q8N138 153 aa8.66□□□□□ -1.02
HOXC6-203ENST00000504315 PRSS47A8MTI9 375 aa8.65□□□□□ -1.02
HOXC6-203ENST00000504315 J3QL48 77 aa8.65□□□□□ -1.02
HOXC6-203ENST00000504315 OXTP01178 125 aa8.65□□□□□ -1.02
HOXC6-203ENST00000504315 RPL39P62891 51 aaKnown RBP8.65□□□□□ -1.02
HOXC6-203ENST00000504315 RNASE13Q5GAN3 156 aaKnown RBP8.65□□□□□ -1.02
HOXC6-203ENST00000504315 SPANXA1Q9NS26 97 aa8.65□□□□□ -1.02
HOXC6-203ENST00000504315 MT-ND4LP03901 98 aa8.64□□□□□ -1.03
HOXC6-203ENST00000504315 HNRNPA3P51991 378 aaKnown RBP8.64□□□□□ -1.03
HOXC6-203ENST00000504315 MRPS36P82909 103 aaKnown RBP8.64□□□□□ -1.03
HOXC6-203ENST00000504315 TMEM136Q6ZRR5 245 aa8.64□□□□□ -1.03
HOXC6-203ENST00000504315 LINC00526Q96FQ7 95 aa8.64□□□□□ -1.03
HOXC6-203ENST00000504315 CARD19Q96LW7 228 aa8.64□□□□□ -1.03
HOXC6-203ENST00000504315 PKIGQ9Y2B9 76 aa8.64□□□□□ -1.03
HOXC6-203ENST00000504315 LAMTOR2Q9Y2Q5 125 aa8.64□□□□□ -1.03
HOXC6-203ENST00000504315 FAT3Q8TDW7 4589 aa8.63□□□□□ -1.03
HOXC6-203ENST00000504315 A0A096LNI7 61 aa8.63□□□□□ -1.03
HOXC6-203ENST00000504315 TRAV13-1A0A0B4J241 112 aa8.63□□□□□ -1.03
HOXC6-203ENST00000504315 ZNF561-AS1K7EIQ3 104 aa8.63□□□□□ -1.03
HOXC6-203ENST00000504315 COX7A2LO14548 114 aa8.63□□□□□ -1.03
HOXC6-203ENST00000504315 PRELID3AQ96N28 172 aa8.63□□□□□ -1.03
HOXC6-203ENST00000504315 SYCNQ0VAF6 134 aa8.62□□□□□ -1.03
HOXC6-203ENST00000504315 LINC00474Q9P2X8 69 aa8.62□□□□□ -1.03
HOXC6-203ENST00000504315 IGKV2-24A0A0C4DH68 120 aa8.61□□□□□ -1.03
HOXC6-203ENST00000504315 ADCYAP1P18509 176 aa8.61□□□□□ -1.03
HOXC6-203ENST00000504315 MALP21145 153 aa8.61□□□□□ -1.03
HOXC6-203ENST00000504315 IFITM2Q01629 132 aa8.61□□□□□ -1.03
HOXC6-203ENST00000504315 MAJINQ3KP22 176 aa8.61□□□□□ -1.03
HOXC6-203ENST00000504315 UQCC3Q6UW78 93 aa8.61□□□□□ -1.03
HOXC6-203ENST00000504315 DPH3Q96FX2 82 aa8.61□□□□□ -1.03
HOXC6-203ENST00000504315 PYGO1Q9Y3Y4 419 aa8.61□□□□□ -1.03
HOXC6-203ENST00000504315 IGLV4-69A0A075B6H9 119 aa8.6□□□□□ -1.03
HOXC6-203ENST00000504315 IGHV3OR16-9A0A0B4J2B5 98 aa8.6□□□□□ -1.03
HOXC6-203ENST00000504315 STPG4Q8N801 248 aa8.6□□□□□ -1.03
HOXC6-203ENST00000504315 C2orf48Q96LS8 159 aa8.6□□□□□ -1.03
HOXC6-203ENST00000504315 IMMP2LQ96T52 175 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms