RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 LELP1Q5T871 98 aa5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 OR5A1Q8NGJ0 315 aa5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 DEFB104AQ8WTQ1 72 aa5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 AMELXQ99217 191 aa5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 CHCHD5Q9BSY4 110 aa5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 PGPEP1Q9NXJ5 209 aa5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 CHTOPQ9Y3Y2 248 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 A0A1B0GUV1 79 aa5.65□□□□□ -1.5
TOPBP1-202ENST00000503338 CST9LQ9H4G1 147 aa5.65□□□□□ -1.5
TOPBP1-202ENST00000503338 NBEAL1Q6ZS30 2694 aa5.64□□□□□ -1.51
TOPBP1-202ENST00000503338 TRAV8-6A0A0B4J262 113 aa5.64□□□□□ -1.51
TOPBP1-202ENST00000503338 TSTD3H0UI37 97 aa5.64□□□□□ -1.51
TOPBP1-202ENST00000503338 MRPL35Q9NZE8 188 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-202ENST00000503338 NBEAL2Q6ZNJ1 2754 aa5.64□□□□□ -1.51
TOPBP1-202ENST00000503338 CCL25O15444 150 aa5.63□□□□□ -1.51
TOPBP1-202ENST00000503338 HERVK_113P61574 105 aa5.63□□□□□ -1.51
TOPBP1-202ENST00000503338 GAGE6Q13070 117 aa5.63□□□□□ -1.51
TOPBP1-202ENST00000503338 NFE4Q86UQ8 179 aa5.63□□□□□ -1.51
TOPBP1-202ENST00000503338 ZNF664Q8N3J9 261 aa5.63□□□□□ -1.51
TOPBP1-202ENST00000503338 CDC42SE2Q9NRR3 84 aa5.63□□□□□ -1.51
TOPBP1-202ENST00000503338 TINCRA0A1B0GVN0 87 aa5.62□□□□□ -1.51
TOPBP1-202ENST00000503338 TMEM262E9PQX1 116 aa5.62□□□□□ -1.51
TOPBP1-202ENST00000503338 IGLC3P0DOY3 106 aa5.62□□□□□ -1.51
TOPBP1-202ENST00000503338 SPATA45Q537H7 98 aa5.62□□□□□ -1.51
TOPBP1-202ENST00000503338 CDPF1Q6NVV7 123 aa5.62□□□□□ -1.51
TOPBP1-202ENST00000503338 LYPD5Q6UWN5 251 aa5.62□□□□□ -1.51
TOPBP1-202ENST00000503338 Q6ZUT4 128 aa5.62□□□□□ -1.51
TOPBP1-202ENST00000503338 ATOH7Q8N100 152 aa5.62□□□□□ -1.51
TOPBP1-202ENST00000503338 PMCHL2Q9BQD1 86 aa5.62□□□□□ -1.51
TOPBP1-202ENST00000503338 PAM16Q9Y3D7 125 aa5.62□□□□□ -1.51
TOPBP1-202ENST00000503338 NUPR2A6NF83 97 aa5.61□□□□□ -1.51
TOPBP1-202ENST00000503338 C11orf86A6NJI1 115 aa5.61□□□□□ -1.51
TOPBP1-202ENST00000503338 UBE2D1P51668 147 aa5.61□□□□□ -1.51
TOPBP1-202ENST00000503338 TCTAP57738 103 aa5.61□□□□□ -1.51
TOPBP1-202ENST00000503338 HERVK_113P63121 156 aa5.61□□□□□ -1.51
TOPBP1-202ENST00000503338 ZC2HC1BQ5TFG8 222 aa5.61□□□□□ -1.51
TOPBP1-202ENST00000503338 CEMP1Q6PRD7 247 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-202ENST00000503338 FAM19A3Q7Z5A8 133 aa5.61□□□□□ -1.51
TOPBP1-202ENST00000503338 OPRPNQ99935 248 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-202ENST00000503338 GEMIN7Q9H840 131 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-202ENST00000503338 IGLV4-69A0A075B6H9 119 aa5.6□□□□□ -1.51
TOPBP1-202ENST00000503338 A6NJY4 79 aa5.6□□□□□ -1.51
TOPBP1-202ENST00000503338 H3BRM9 83 aa5.6□□□□□ -1.51
TOPBP1-202ENST00000503338 CCL18P55774 89 aa5.6□□□□□ -1.51
TOPBP1-202ENST00000503338 RBX1P62877 108 aa5.6□□□□□ -1.51
TOPBP1-202ENST00000503338 TMEM170BQ5T4T1 132 aa5.6□□□□□ -1.51
TOPBP1-202ENST00000503338 FAM104AQ969W3 186 aa5.6□□□□□ -1.51
TOPBP1-202ENST00000503338 CHAC1Q9BUX1 264 aa5.6□□□□□ -1.51
TOPBP1-202ENST00000503338 UQCR10Q9UDW1 63 aa5.6□□□□□ -1.51
TOPBP1-202ENST00000503338 KLK5Q9Y337 293 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-202ENST00000503338 IGLV4-60A0A075B6I1 120 aa5.59□□□□□ -1.51
TOPBP1-202ENST00000503338 hDV102S1A0JD36 115 aa5.59□□□□□ -1.51
TOPBP1-202ENST00000503338 IGLL5B9A064 214 aa5.59□□□□□ -1.51
TOPBP1-202ENST00000503338 SS18Q15532 418 aa5.59□□□□□ -1.51
TOPBP1-202ENST00000503338 MPV17L2Q567V2 206 aa5.59□□□□□ -1.51
TOPBP1-202ENST00000503338 IGLV5-45A0A087WSX0 123 aa5.58□□□□□ -1.52
TOPBP1-202ENST00000503338 TRAV13-1A0A0B4J241 112 aa5.58□□□□□ -1.52
TOPBP1-202ENST00000503338 A0A0J9YXV3 536 aa5.58□□□□□ -1.52
TOPBP1-202ENST00000503338 E9PLD3 99 aa5.58□□□□□ -1.52
TOPBP1-202ENST00000503338 ANGP03950 147 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-202ENST00000503338 ZNF22P17026 224 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-202ENST00000503338 ESRGQ1W209 222 aa5.58□□□□□ -1.52
TOPBP1-202ENST00000503338 RNASE13Q5GAN3 156 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-202ENST00000503338 STPG4Q8N801 248 aa5.58□□□□□ -1.52
TOPBP1-202ENST00000503338 MIEN1Q9BRT3 115 aa5.58□□□□□ -1.52
TOPBP1-202ENST00000503338 MRPS16Q9Y3D3 137 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-202ENST00000503338 TMEM223A0PJW6 202 aa5.57□□□□□ -1.52
TOPBP1-202ENST00000503338 K7EP13 123 aa5.57□□□□□ -1.52
TOPBP1-202ENST00000503338 DLEU1O43261 78 aa5.57□□□□□ -1.52
TOPBP1-202ENST00000503338 COX8AP10176 69 aa5.57□□□□□ -1.52
TOPBP1-202ENST00000503338 MAJINQ3KP22 176 aa5.57□□□□□ -1.52
TOPBP1-202ENST00000503338 LINC01556Q5JQF7 62 aa5.57□□□□□ -1.52
TOPBP1-202ENST00000503338 LINC00242Q5T6M2 205 aa5.57□□□□□ -1.52
TOPBP1-202ENST00000503338 SLC25A34Q6PIV7 304 aa5.57□□□□□ -1.52
TOPBP1-202ENST00000503338 LINC00469Q8N7U9 141 aa5.57□□□□□ -1.52
TOPBP1-202ENST00000503338 PLEKHB2Q96CS7 222 aa5.57□□□□□ -1.52
TOPBP1-202ENST00000503338 UPK3BQ9BT76 320 aa5.57□□□□□ -1.52
TOPBP1-202ENST00000503338 TRAV8-4A0A0B4J246 113 aa5.56□□□□□ -1.52
TOPBP1-202ENST00000503338 LINC00959A0A1B0GUT2 108 aa5.56□□□□□ -1.52
TOPBP1-202ENST00000503338 LEPROTO15243 131 aa5.56□□□□□ -1.52
TOPBP1-202ENST00000503338 CRPP02741 224 aa5.56□□□□□ -1.52
TOPBP1-202ENST00000503338 NMUP48645 174 aa5.56□□□□□ -1.52
TOPBP1-202ENST00000503338 REG3AQ06141 175 aa5.56□□□□□ -1.52
TOPBP1-202ENST00000503338 ANKRD39Q53RE8 183 aa5.56□□□□□ -1.52
TOPBP1-202ENST00000503338 LINC00528Q8N1L1 170 aa5.56□□□□□ -1.52
TOPBP1-202ENST00000503338 LINC01561Q8N1V8 128 aa5.56□□□□□ -1.52
TOPBP1-202ENST00000503338 PRO1933Q9H354 126 aa5.56□□□□□ -1.52
TOPBP1-202ENST00000503338 PRR34Q9NV39 138 aa5.56□□□□□ -1.52
TOPBP1-202ENST00000503338 IGHV1-58A0A0C4DH39 117 aa5.55□□□□□ -1.52
TOPBP1-202ENST00000503338 SIVA1O15304 175 aa5.55□□□□□ -1.52
TOPBP1-202ENST00000503338 DNAH10OSP0CZ25 163 aa5.55□□□□□ -1.52
TOPBP1-202ENST00000503338 LGALS3P17931 250 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-202ENST00000503338 DDTP30046 118 aa5.55□□□□□ -1.52
TOPBP1-202ENST00000503338 SMCPP49901 116 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-202ENST00000503338 BOD1L2Q8IYS8 172 aa5.55□□□□□ -1.52
TOPBP1-202ENST00000503338 LINC00269Q8N2A0 174 aa5.55□□□□□ -1.52
TOPBP1-202ENST00000503338 C10orf126Q8N4M7 172 aa5.55□□□□□ -1.52
TOPBP1-202ENST00000503338 C14orf144Q96I85 54 aa5.55□□□□□ -1.52
TOPBP1-202ENST00000503338 TENM3Q9P273 2699 aa5.55□□□□□ -1.52
TOPBP1-202ENST00000503338 IGKV3OR2-268A0A0C4DH90 116 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms