RNA–Protein interactions for RNA: ENST00000503252.1

LPCAT1-203, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 2,694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-203ENST00000503252 TSPEAR-AS2P59090 65 aa13.5□□□□□ -0.25
LPCAT1-203ENST00000503252 TMEM262E9PQX1 116 aa13.5□□□□□ -0.25
LPCAT1-203ENST00000503252 SCGB1D4Q6XE38 83 aa13.5□□□□□ -0.25
LPCAT1-203ENST00000503252 DNAJC30Q96LL9 226 aa13.5□□□□□ -0.25
LPCAT1-203ENST00000503252 KMT2BQ9UMN6 2715 aaPredicted RBP13.49□□□□□ -0.25
LPCAT1-203ENST00000503252 IGLV4-3A0A075B6K6 122 aa13.49□□□□□ -0.25
LPCAT1-203ENST00000503252 CRLF1O75462 422 aa13.49□□□□□ -0.25
LPCAT1-203ENST00000503252 TEN1Q86WV5 123 aa13.49□□□□□ -0.25
LPCAT1-203ENST00000503252 LINC00694P0DN24 101 aa13.49□□□□□ -0.25
LPCAT1-203ENST00000503252 C1orf158Q8N1D5 194 aa13.49□□□□□ -0.25
LPCAT1-203ENST00000503252 UNC79Q9P2D8 2635 aa13.49□□□□□ -0.25
LPCAT1-203ENST00000503252 C16orf95Q9H693 158 aa13.48□□□□□ -0.25
LPCAT1-203ENST00000503252 BEAN1Q3B7T3 259 aa13.48□□□□□ -0.25
LPCAT1-203ENST00000503252 CEMP1Q6PRD7 247 aaPredicted RBP13.47□□□□□ -0.25
LPCAT1-203ENST00000503252 FAM104AQ969W3 186 aa13.47□□□□□ -0.25
LPCAT1-203ENST00000503252 A0A0J9YXV3 536 aa13.46□□□□□ -0.25
LPCAT1-203ENST00000503252 IGHV3-53P01767 116 aa13.46□□□□□ -0.26
LPCAT1-203ENST00000503252 MRPL23Q16540 153 aaKnown RBP13.46□□□□□ -0.26
LPCAT1-203ENST00000503252 SETXQ7Z333 2677 aaKnown RBP13.45□□□□□ -0.26
LPCAT1-203ENST00000503252 RS1O15537 224 aa13.45□□□□□ -0.26
LPCAT1-203ENST00000503252 IGHV3-38A0A0C4DH36 116 aa13.45□□□□□ -0.26
LPCAT1-203ENST00000503252 PSMB2P49721 201 aa13.45□□□□□ -0.26
LPCAT1-203ENST00000503252 SMR3AQ99954 134 aa13.45□□□□□ -0.26
LPCAT1-203ENST00000503252 A0A0J9YY99 117 aa13.44□□□□□ -0.26
LPCAT1-203ENST00000503252 SRSF9Q13242 221 aaKnown RBP eCLIP13.44□□□□□ -0.26
LPCAT1-203ENST00000503252 FAM19A5Q7Z5A7 132 aaPredicted RBP13.44□□□□□ -0.26
LPCAT1-203ENST00000503252 CHCHD7Q9BUK0 85 aa13.44□□□□□ -0.26
LPCAT1-203ENST00000503252 TMEM223A0PJW6 202 aa13.44□□□□□ -0.26
LPCAT1-203ENST00000503252 J3QQQ9 107 aa13.44□□□□□ -0.26
LPCAT1-203ENST00000503252 ZNF22P17026 224 aaPredicted RBP13.44□□□□□ -0.26
LPCAT1-203ENST00000503252 RNASE13Q5GAN3 156 aaKnown RBP13.44□□□□□ -0.26
LPCAT1-203ENST00000503252 AMELXQ99217 191 aa13.44□□□□□ -0.26
LPCAT1-203ENST00000503252 PYGO1Q9Y3Y4 419 aa13.44□□□□□ -0.26
LPCAT1-203ENST00000503252 JMJD1CQ15652 2540 aa13.43□□□□□ -0.26
LPCAT1-203ENST00000503252 SFTA2Q6UW10 78 aa13.43□□□□□ -0.26
LPCAT1-203ENST00000503252 WFDC10AQ9H1F0 79 aa13.43□□□□□ -0.26
LPCAT1-203ENST00000503252 IGHV3-64A0A075B6Q5 118 aa13.43□□□□□ -0.26
LPCAT1-203ENST00000503252 TRGV1A0A0A0MS02 117 aa13.42□□□□□ -0.26
LPCAT1-203ENST00000503252 FASNP49327 2511 aaKnown RBP13.42□□□□□ -0.26
LPCAT1-203ENST00000503252 NOTCH3Q9UM47 2321 aa13.42□□□□□ -0.26
LPCAT1-203ENST00000503252 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.42□□□□□ -0.26
LPCAT1-203ENST00000503252 IGKV2-29A2NJV5 120 aaPredicted RBP13.42□□□□□ -0.26
LPCAT1-203ENST00000503252 IL17DQ8TAD2 202 aa13.42□□□□□ -0.26
LPCAT1-203ENST00000503252 ADARB2-AS1A8MUL3 147 aa13.41□□□□□ -0.26
LPCAT1-203ENST00000503252 HILS1P60008 231 aa13.41□□□□□ -0.26
LPCAT1-203ENST00000503252 Q6Q795 121 aa13.41□□□□□ -0.26
LPCAT1-203ENST00000503252 LGALS3P17931 250 aaKnown RBP13.41□□□□□ -0.26
LPCAT1-203ENST00000503252 LOC107984156A0A0G2JMH3 177 aa13.4□□□□□ -0.26
LPCAT1-203ENST00000503252 LEPROTO15243 131 aa13.4□□□□□ -0.26
LPCAT1-203ENST00000503252 GIG44P09565 113 aaPredicted RBP13.4□□□□□ -0.26
LPCAT1-203ENST00000503252 ARL17AQ8IVW1 177 aa13.4□□□□□ -0.26
LPCAT1-203ENST00000503252 UBE2D4Q9Y2X8 147 aa13.4□□□□□ -0.26
LPCAT1-203ENST00000503252 ANKRD29Q8N6D5 301 aa13.39□□□□□ -0.27
LPCAT1-203ENST00000503252 IGLV1-51P01701 117 aa13.39□□□□□ -0.27
LPCAT1-203ENST00000503252 Q6ZTI0 123 aa13.39□□□□□ -0.27
LPCAT1-203ENST00000503252 SLC25A29Q8N8R3 303 aa13.38□□□□□ -0.27
LPCAT1-203ENST00000503252 C9JAW5 83 aa13.37□□□□□ -0.27
LPCAT1-203ENST00000503252 RPL35AP18077 110 aaKnown RBP13.37□□□□□ -0.27
LPCAT1-203ENST00000503252 MRPS36P82909 103 aaKnown RBP13.37□□□□□ -0.27
LPCAT1-203ENST00000503252 C19orf73Q9NVV2 129 aa13.37□□□□□ -0.27
LPCAT1-203ENST00000503252 F5H768 121 aa13.36□□□□□ -0.27
LPCAT1-203ENST00000503252 UBE2D1P51668 147 aa13.36□□□□□ -0.27
LPCAT1-203ENST00000503252 TMEM263Q8WUH6 116 aaKnown RBP13.36□□□□□ -0.27
LPCAT1-203ENST00000503252 CHCHD5Q9BSY4 110 aa13.36□□□□□ -0.27
LPCAT1-203ENST00000503252 IGHV3-30P01768 117 aa13.36□□□□□ -0.27
LPCAT1-203ENST00000503252 IGHV3-30-5P0DP03 117 aa13.36□□□□□ -0.27
LPCAT1-203ENST00000503252 HIVEP2P31629 2446 aa13.36□□□□□ -0.27
LPCAT1-203ENST00000503252 NOP10Q9NPE3 64 aaKnown RBP13.35□□□□□ -0.27
LPCAT1-203ENST00000503252 J3KT08 172 aa13.35□□□□□ -0.27
LPCAT1-203ENST00000503252 NDUFA7O95182 113 aa13.34□□□□□ -0.27
LPCAT1-203ENST00000503252 CMC4P56277 68 aaPredicted RBP13.34□□□□□ -0.27
LPCAT1-203ENST00000503252 GCN1Q92616 2671 aaKnown RBP13.34□□□□□ -0.27
LPCAT1-203ENST00000503252 TRAV8-3A0A0A6YYJ7 113 aa13.34□□□□□ -0.27
LPCAT1-203ENST00000503252 TMEM101Q96IK0 257 aa13.34□□□□□ -0.27
LPCAT1-203ENST00000503252 IGHV3-30-3P0DP02 117 aa13.33□□□□□ -0.28
LPCAT1-203ENST00000503252 KRTAP10-3P60369 221 aa13.33□□□□□ -0.28
LPCAT1-203ENST00000503252 HECTD1Q9ULT8 2610 aa13.32□□□□□ -0.28
LPCAT1-203ENST00000503252 C10orf126Q8N4M7 172 aa13.32□□□□□ -0.28
LPCAT1-203ENST00000503252 OR13C6PQ8NH95 151 aa13.32□□□□□ -0.28
LPCAT1-203ENST00000503252 TIMM21Q9BVV7 248 aa13.32□□□□□ -0.28
LPCAT1-203ENST00000503252 PLAC8L1A1L4L8 177 aa13.32□□□□□ -0.28
LPCAT1-203ENST00000503252 C15orf53Q8NAA6 179 aa13.32□□□□□ -0.28
LPCAT1-203ENST00000503252 K7EQD1 137 aa13.31□□□□□ -0.28
LPCAT1-203ENST00000503252 TINCRA0A1B0GVN0 87 aa13.31□□□□□ -0.28
LPCAT1-203ENST00000503252 NDUFA11Q86Y39 141 aa13.31□□□□□ -0.28
LPCAT1-203ENST00000503252 CFC1BP0CG36 223 aa13.3□□□□□ -0.28
LPCAT1-203ENST00000503252 CFC1P0CG37 223 aa13.3□□□□□ -0.28
LPCAT1-203ENST00000503252 SBSPONQ8IVN8 264 aa13.3□□□□□ -0.28
LPCAT1-203ENST00000503252 LY6G6DO95868 133 aa13.29□□□□□ -0.28
LPCAT1-203ENST00000503252 TCL1BO95988 128 aa13.29□□□□□ -0.28
LPCAT1-203ENST00000503252 DAZ2Q13117 558 aaKnown RBP13.29□□□□□ -0.28
LPCAT1-203ENST00000503252 CSNK1G2-AS1Q8NCQ2 148 aa13.29□□□□□ -0.28
LPCAT1-203ENST00000503252 A8MZ25 164 aa13.29□□□□□ -0.28
LPCAT1-203ENST00000503252 RPL36AP83881 106 aaKnown RBP13.29□□□□□ -0.28
LPCAT1-203ENST00000503252 RPL36ALQ969Q0 106 aaKnown RBP13.29□□□□□ -0.28
LPCAT1-203ENST00000503252 IGHV1-58A0A0C4DH39 117 aa13.28□□□□□ -0.28
LPCAT1-203ENST00000503252 SCGB1C2P0DMR2 95 aa13.28□□□□□ -0.28
LPCAT1-203ENST00000503252 C16orf74Q96GX8 76 aa13.28□□□□□ -0.28
LPCAT1-203ENST00000503252 A0A0J9YXY3 114 aa13.28□□□□□ -0.28
LPCAT1-203ENST00000503252 TRBV10-1A0A0K0K1A3 114 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 578 ms