RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 IGKV2-24A0A0C4DH68 120 aa3.78□□□□□ -1.8
LSM3P4-201ENST00000502948 A8MWL6 223 aa3.78□□□□□ -1.8
LSM3P4-201ENST00000502948 ZNF561-AS1K7EIQ3 104 aa3.78□□□□□ -1.8
LSM3P4-201ENST00000502948 PTTG1IPP53801 180 aa3.78□□□□□ -1.8
LSM3P4-201ENST00000502948 SS18Q15532 418 aa3.78□□□□□ -1.8
LSM3P4-201ENST00000502948 RNF151Q2KHN1 245 aa3.78□□□□□ -1.8
LSM3P4-201ENST00000502948 HIGD2BQ4VC39 106 aa3.78□□□□□ -1.8
LSM3P4-201ENST00000502948 RNASEKQ6P5S7 137 aaKnown RBP3.78□□□□□ -1.8
LSM3P4-201ENST00000502948 OCC1Q8TAD7 63 aa3.78□□□□□ -1.8
LSM3P4-201ENST00000502948 MRAP2Q96G30 205 aa3.78□□□□□ -1.8
LSM3P4-201ENST00000502948 C2orf48Q96LS8 159 aa3.78□□□□□ -1.8
LSM3P4-201ENST00000502948 CARD19Q96LW7 228 aa3.78□□□□□ -1.8
LSM3P4-201ENST00000502948 TMEM191AQ9H0A3 160 aa3.78□□□□□ -1.8
LSM3P4-201ENST00000502948 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 TRAV26-2A0A0B4J265 109 aa3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 LOC107984640A0A0U1RRK4 108 aa3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 IGKV2-29A2NJV5 120 aaPredicted RBP3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 C1orf196B1AJZ1 125 aa3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 K7EN84 100 aa3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 PPP1R17O96001 155 aa3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 TSHBP01222 138 aa3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 SYCNQ0VAF6 134 aa3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 ODF1Q14990 250 aa3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 SLC51BQ86UW2 128 aa3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 ZNF664Q8N3J9 261 aa3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 LYPD6BQ8NI32 183 aa3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 TSKUQ8WUA8 353 aa3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 RPL39LQ96EH5 51 aaKnown RBP3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 ST20Q9HBF5 79 aa3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 RNF213Q63HN8 5207 aa3.77□□□□□ -1.81
LSM3P4-201ENST00000502948 IGLV4-69A0A075B6H9 119 aa3.76□□□□□ -1.81
LSM3P4-201ENST00000502948 C7orf77A4D0Y5 90 aa3.76□□□□□ -1.81
LSM3P4-201ENST00000502948 TCAPO15273 167 aa3.76□□□□□ -1.81
LSM3P4-201ENST00000502948 PMCHP20382 165 aa3.76□□□□□ -1.81
LSM3P4-201ENST00000502948 XCL1P47992 114 aa3.76□□□□□ -1.81
LSM3P4-201ENST00000502948 CAMPP49913 170 aa3.76□□□□□ -1.81
LSM3P4-201ENST00000502948 TCTE3Q8IZS6 198 aa3.76□□□□□ -1.81
LSM3P4-201ENST00000502948 NUP35Q8NFH5 326 aa3.76□□□□□ -1.81
LSM3P4-201ENST00000502948 TIMM21Q9BVV7 248 aa3.76□□□□□ -1.81
LSM3P4-201ENST00000502948 RNASE7Q9H1E1 156 aaKnown RBP3.76□□□□□ -1.81
LSM3P4-201ENST00000502948 PSORS1C2Q9UIG4 136 aa3.76□□□□□ -1.81
LSM3P4-201ENST00000502948 IGKV3OR2-268A0A0C4DH90 116 aa3.75□□□□□ -1.81
LSM3P4-201ENST00000502948 A0A1B0GUT8 65 aa3.75□□□□□ -1.81
LSM3P4-201ENST00000502948 VCYO14598 125 aa3.75□□□□□ -1.81
LSM3P4-201ENST00000502948 GATCO43716 136 aaKnown RBP3.75□□□□□ -1.81
LSM3P4-201ENST00000502948 APOMO95445 188 aa3.75□□□□□ -1.81
LSM3P4-201ENST00000502948 GHRHP01286 108 aa3.75□□□□□ -1.81
LSM3P4-201ENST00000502948 TLX1NBP0CAT3 122 aa3.75□□□□□ -1.81
LSM3P4-201ENST00000502948 RAB4AP20338 218 aa3.75□□□□□ -1.81
LSM3P4-201ENST00000502948 RPL32P62910 135 aaKnown RBP3.75□□□□□ -1.81
LSM3P4-201ENST00000502948 OR10D4PQ8NGN7 298 aa3.75□□□□□ -1.81
LSM3P4-201ENST00000502948 BORCS7Q96B45 105 aa3.75□□□□□ -1.81
LSM3P4-201ENST00000502948 UBE2D4Q9Y2X8 147 aa3.75□□□□□ -1.81
LSM3P4-201ENST00000502948 TRBV24-1A0A075B6N3 115 aa3.74□□□□□ -1.81
LSM3P4-201ENST00000502948 LINC00862A6NCI5 91 aa3.74□□□□□ -1.81
LSM3P4-201ENST00000502948 COX7A2LO14548 114 aa3.74□□□□□ -1.81
LSM3P4-201ENST00000502948 PPP1R2P9O14990 202 aa3.74□□□□□ -1.81
LSM3P4-201ENST00000502948 MALP21145 153 aa3.74□□□□□ -1.81
LSM3P4-201ENST00000502948 BLOC1S1P78537 153 aa3.74□□□□□ -1.81
LSM3P4-201ENST00000502948 TMEM241Q24JQ0 296 aa3.74□□□□□ -1.81
LSM3P4-201ENST00000502948 TMEM18Q96B42 140 aa3.74□□□□□ -1.81
LSM3P4-201ENST00000502948 C20orf78Q9BR46 151 aa3.74□□□□□ -1.81
LSM3P4-201ENST00000502948 OSTCQ9NRP0 149 aa3.74□□□□□ -1.81
LSM3P4-201ENST00000502948 MRPL35Q9NZE8 188 aaKnown RBP3.74□□□□□ -1.81
LSM3P4-201ENST00000502948 A0A1W2PNN7 141 aa3.73□□□□□ -1.81
LSM3P4-201ENST00000502948 HIGD1CA8MV81 97 aa3.73□□□□□ -1.81
LSM3P4-201ENST00000502948 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.73□□□□□ -1.81
LSM3P4-201ENST00000502948 SUMO2P61956 95 aaKnown RBP3.73□□□□□ -1.81
LSM3P4-201ENST00000502948 LINC01551Q86U37 167 aa3.73□□□□□ -1.81
LSM3P4-201ENST00000502948 DIRC1Q969H9 104 aa3.73□□□□□ -1.81
LSM3P4-201ENST00000502948 CAMK2N2Q96S95 79 aa3.73□□□□□ -1.81
LSM3P4-201ENST00000502948 IMMP2LQ96T52 175 aa3.73□□□□□ -1.81
LSM3P4-201ENST00000502948 KIR2DL4Q99706 377 aa3.73□□□□□ -1.81
LSM3P4-201ENST00000502948 TMEM242Q9NWH2 141 aa3.73□□□□□ -1.81
LSM3P4-201ENST00000502948 IGLV1-50A0A075B6I6 118 aa3.72□□□□□ -1.81
LSM3P4-201ENST00000502948 IGHV3OR16-9A0A0B4J2B5 98 aa3.72□□□□□ -1.81
LSM3P4-201ENST00000502948 A0A1B0GW15 77 aa3.72□□□□□ -1.81
LSM3P4-201ENST00000502948 GAS8-AS1O95177 125 aa3.72□□□□□ -1.81
LSM3P4-201ENST00000502948 MRPS36P82909 103 aaKnown RBP3.72□□□□□ -1.81
LSM3P4-201ENST00000502948 GAGE2BQ13066 116 aa3.72□□□□□ -1.81
LSM3P4-201ENST00000502948 RIGQ13278 110 aa3.72□□□□□ -1.81
LSM3P4-201ENST00000502948 C9orf116Q5BN46 136 aaPredicted RBP3.72□□□□□ -1.81
LSM3P4-201ENST00000502948 NRACQ8N912 160 aa3.72□□□□□ -1.81
LSM3P4-201ENST00000502948 LINC00526Q96FQ7 95 aa3.72□□□□□ -1.81
LSM3P4-201ENST00000502948 H0Y9J4 135 aa3.71□□□□□ -1.82
LSM3P4-201ENST00000502948 MT-ND6P03923 174 aa3.71□□□□□ -1.82
LSM3P4-201ENST00000502948 IGLV7-43P04211 117 aa3.71□□□□□ -1.82
LSM3P4-201ENST00000502948 FCER1GP30273 86 aa3.71□□□□□ -1.82
LSM3P4-201ENST00000502948 FAM74A3Q4VXF1 159 aa3.71□□□□□ -1.82
LSM3P4-201ENST00000502948 FAM104BQ5XKR9 115 aa3.71□□□□□ -1.82
LSM3P4-201ENST00000502948 AMN1Q8IY45 258 aa3.71□□□□□ -1.82
LSM3P4-201ENST00000502948 SPANXA1Q9NS26 97 aa3.71□□□□□ -1.82
LSM3P4-201ENST00000502948 NAT8BQ9UHF3 227 aa3.71□□□□□ -1.82
LSM3P4-201ENST00000502948 V9GYV3 84 aa3.71□□□□□ -1.82
LSM3P4-201ENST00000502948 LPAP08519 4548 aa3.71□□□□□ -1.82
LSM3P4-201ENST00000502948 NDUFA1O15239 70 aa3.7□□□□□ -1.82
LSM3P4-201ENST00000502948 RPL13AP40429 203 aaKnown RBP3.7□□□□□ -1.82
LSM3P4-201ENST00000502948 SPAG11BQ08648 103 aa3.7□□□□□ -1.82
LSM3P4-201ENST00000502948 C1orf137Q5JT78 98 aa3.7□□□□□ -1.82
LSM3P4-201ENST00000502948 LCE2CQ5TA81 110 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms