RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-210ENST00000497730 TSLPQ969D9 159 aa-0.22□□□□□ -2.44
TRA2A-210ENST00000497730 LRRC37A2A6NM11 1700 aa-0.22□□□□□ -2.44
TRA2A-210ENST00000497730 C2CD3Q4AC94 2353 aa-0.23□□□□□ -2.45
TRA2A-210ENST00000497730 K7EP13 123 aa-0.23□□□□□ -2.45
TRA2A-210ENST00000497730 IFNGP01579 166 aa-0.23□□□□□ -2.45
TRA2A-210ENST00000497730 FGF7P21781 194 aa-0.23□□□□□ -2.45
TRA2A-210ENST00000497730 SPRR1AP35321 89 aa-0.23□□□□□ -2.45
TRA2A-210ENST00000497730 TPPP2P59282 170 aa-0.23□□□□□ -2.45
TRA2A-210ENST00000497730 CPSF1Q10570 1443 aaKnown RBP-0.23□□□□□ -2.45
TRA2A-210ENST00000497730 DOPEY1Q5JWR5 2465 aa-0.24□□□□□ -2.45
TRA2A-210ENST00000497730 PATJQ8NI35 1801 aa-0.24□□□□□ -2.45
TRA2A-210ENST00000497730 DOCK1Q14185 1865 aa-0.24□□□□□ -2.45
TRA2A-210ENST00000497730 IGLC7A0M8Q6 106 aa-0.24□□□□□ -2.45
TRA2A-210ENST00000497730 PI4KAP42356 2102 aa-0.24□□□□□ -2.45
TRA2A-210ENST00000497730 C8orf59Q8N0T1 100 aaPredicted RBP-0.24□□□□□ -2.45
TRA2A-210ENST00000497730 SPANXDQ9BXN6 97 aa-0.24□□□□□ -2.45
TRA2A-210ENST00000497730 PKDREJQ9NTG1 2253 aa-0.24□□□□□ -2.45
TRA2A-210ENST00000497730 PPRC1Q5VV67 1664 aaKnown RBP-0.24□□□□□ -2.45
TRA2A-210ENST00000497730 ZNF236Q9UL36 1845 aa-0.24□□□□□ -2.45
TRA2A-210ENST00000497730 RYR3Q15413 4870 aa-0.25□□□□□ -2.45
TRA2A-210ENST00000497730 HMCN2Q8NDA2 5059 aa-0.25□□□□□ -2.45
TRA2A-210ENST00000497730 LOC100130705A0A1B0GUX0 176 aa-0.25□□□□□ -2.45
TRA2A-210ENST00000497730 AKAIN1P0CW23 69 aa-0.25□□□□□ -2.45
TRA2A-210ENST00000497730 PIGYQ3MUY2 71 aa-0.25□□□□□ -2.45
TRA2A-210ENST00000497730 C1orf54Q8WWF1 131 aa-0.25□□□□□ -2.45
TRA2A-210ENST00000497730 LINC00472Q9H8W2 130 aa-0.25□□□□□ -2.45
TRA2A-210ENST00000497730 C10orf71Q711Q0 1435 aa-0.25□□□□□ -2.45
TRA2A-210ENST00000497730 MBD5Q9P267 1494 aa-0.25□□□□□ -2.45
TRA2A-210ENST00000497730 PHLPP1O60346 1717 aa-0.25□□□□□ -2.45
TRA2A-210ENST00000497730 PLXNB2O15031 1838 aa-0.25□□□□□ -2.45
TRA2A-210ENST00000497730 DOPEY2Q9Y3R5 2298 aa-0.25□□□□□ -2.45
TRA2A-210ENST00000497730 TRBV6-1A0A0K0K1D8 114 aa-0.26□□□□□ -2.45
TRA2A-210ENST00000497730 LOC285095A0A1B0GVY8 99 aa-0.26□□□□□ -2.45
TRA2A-210ENST00000497730 HMGN4O00479 90 aa-0.26□□□□□ -2.45
TRA2A-210ENST00000497730 SSSCA1O60232 199 aa-0.26□□□□□ -2.45
TRA2A-210ENST00000497730 TNFP01375 233 aa-0.26□□□□□ -2.45
TRA2A-210ENST00000497730 C5orf38Q86SI9 138 aa-0.26□□□□□ -2.45
TRA2A-210ENST00000497730 LINC01558Q9Y6Z2 57 aa-0.26□□□□□ -2.45
TRA2A-210ENST00000497730 DOCK2Q92608 1830 aa-0.27□□□□□ -2.45
TRA2A-210ENST00000497730 LAMC1P11047 1609 aa-0.27□□□□□ -2.45
TRA2A-210ENST00000497730 I3L2K1 104 aa-0.27□□□□□ -2.45
TRA2A-210ENST00000497730 COMMD6Q7Z4G1 85 aa-0.27□□□□□ -2.45
TRA2A-210ENST00000497730 MYOZ3Q8TDC0 251 aa-0.27□□□□□ -2.45
TRA2A-210ENST00000497730 PLCE1Q9P212 2302 aa-0.27□□□□□ -2.45
TRA2A-210ENST00000497730 LOC730098B7Z3J9 87 aa-0.28□□□□□ -2.45
TRA2A-210ENST00000497730 KIF21AQ7Z4S6 1674 aa-0.28□□□□□ -2.45
TRA2A-210ENST00000497730 KTN1Q86UP2 1357 aaKnown RBP-0.29□□□□□ -2.46
TRA2A-210ENST00000497730 SFT2D2O95562 160 aa-0.29□□□□□ -2.46
TRA2A-210ENST00000497730 MRPL54Q6P161 138 aaKnown RBP-0.29□□□□□ -2.46
TRA2A-210ENST00000497730 PP6455Q8WZ26 134 aa-0.29□□□□□ -2.46
TRA2A-210ENST00000497730 MYCBP2O75592 4640 aa-0.29□□□□□ -2.46
TRA2A-210ENST00000497730 FOCADQ5VW36 1801 aa-0.29□□□□□ -2.46
TRA2A-210ENST00000497730 CHKB-CPT1BH3BT56 60 aa-0.3□□□□□ -2.46
TRA2A-210ENST00000497730 MYH7P12883 1935 aa-0.3□□□□□ -2.46
TRA2A-210ENST00000497730 UBR4Q5T4S7 5183 aa-0.31□□□□□ -2.46
TRA2A-210ENST00000497730 ROCK2O75116 1388 aaKnown RBP-0.31□□□□□ -2.46
TRA2A-210ENST00000497730 CSMD3Q7Z407 3707 aa-0.31□□□□□ -2.46
TRA2A-210ENST00000497730 OOSP1A8MZH6 123 aa-0.31□□□□□ -2.46
TRA2A-210ENST00000497730 C9orf153Q5TBE3 101 aa-0.31□□□□□ -2.46
TRA2A-210ENST00000497730 LINC00474Q9P2X8 69 aa-0.31□□□□□ -2.46
TRA2A-210ENST00000497730 PKD1L1Q8TDX9 2849 aa-0.31□□□□□ -2.46
TRA2A-210ENST00000497730 RIMS1Q86UR5 1692 aaKnown RBP-0.31□□□□□ -2.46
TRA2A-210ENST00000497730 CHD6Q8TD26 2715 aa-0.31□□□□□ -2.46
TRA2A-210ENST00000497730 HYDINQ4G0P3 5121 aa-0.32□□□□□ -2.46
TRA2A-210ENST00000497730 KIAA1109Q2LD37 5005 aa-0.32□□□□□ -2.46
TRA2A-210ENST00000497730 BCL9LQ86UU0 1499 aa-0.32□□□□□ -2.46
TRA2A-210ENST00000497730 SHANK2Q9UPX8 1470 aa-0.32□□□□□ -2.46
TRA2A-210ENST00000497730 SNAPC5O75971 98 aa-0.32□□□□□ -2.46
TRA2A-210ENST00000497730 SPRR2DP22532 72 aa-0.32□□□□□ -2.46
TRA2A-210ENST00000497730 KRTAP19-7Q3SYF9 63 aa-0.32□□□□□ -2.46
TRA2A-210ENST00000497730 RPL13AP3Q6NVV1 102 aa-0.32□□□□□ -2.46
TRA2A-210ENST00000497730 FXYD6Q9H0Q3 95 aa-0.32□□□□□ -2.46
TRA2A-210ENST00000497730 FAIMQ9NVQ4 179 aa-0.32□□□□□ -2.46
TRA2A-210ENST00000497730 UQCR10Q9UDW1 63 aa-0.32□□□□□ -2.46
TRA2A-210ENST00000497730 SBF2Q86WG5 1849 aa-0.32□□□□□ -2.46
TRA2A-210ENST00000497730 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.32□□□□□ -2.46
TRA2A-210ENST00000497730 USF3Q68DE3 2245 aa-0.33□□□□□ -2.46
TRA2A-210ENST00000497730 PRM1P04553 51 aa-0.33□□□□□ -2.46
TRA2A-210ENST00000497730 MGPP08493 103 aa-0.33□□□□□ -2.46
TRA2A-210ENST00000497730 HSPG2P98160 4391 aa-0.34□□□□□ -2.46
TRA2A-210ENST00000497730 PAPPAQ13219 1627 aa-0.34□□□□□ -2.46
TRA2A-210ENST00000497730 VWFP04275 2813 aa-0.34□□□□□ -2.46
TRA2A-210ENST00000497730 UBE2L5PA0A1B0GUS4 154 aa-0.34□□□□□ -2.46
TRA2A-210ENST00000497730 K7EQZ3 153 aa-0.34□□□□□ -2.46
TRA2A-210ENST00000497730 COX6B1P14854 86 aa-0.34□□□□□ -2.46
TRA2A-210ENST00000497730 UBE2L3P68036 154 aaKnown RBP-0.34□□□□□ -2.46
TRA2A-210ENST00000497730 NXT2Q9NPJ8 142 aaKnown RBP-0.34□□□□□ -2.46
TRA2A-210ENST00000497730 RNF213Q63HN8 5207 aa-0.34□□□□□ -2.46
TRA2A-210ENST00000497730 A2ML1A8K2U0 1454 aa-0.35□□□□□ -2.46
TRA2A-210ENST00000497730 HERC2O95714 4834 aa-0.35□□□□□ -2.46
TRA2A-210ENST00000497730 HIVEP1P15822 2718 aa-0.35□□□□□ -2.46
TRA2A-210ENST00000497730 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.35□□□□□ -2.47
TRA2A-210ENST00000497730 USH2AO75445 5202 aa-0.35□□□□□ -2.47
TRA2A-210ENST00000497730 EPPK1P58107 5090 aaKnown RBP-0.35□□□□□ -2.47
TRA2A-210ENST00000497730 RYR1P21817 5038 aa-0.35□□□□□ -2.47
TRA2A-210ENST00000497730 POLA1P09884 1462 aaPredicted RBP-0.35□□□□□ -2.47
TRA2A-210ENST00000497730 WDR7Q9Y4E6 1490 aa-0.35□□□□□ -2.47
TRA2A-210ENST00000497730 FAM24AA6NFZ4 105 aa-0.36□□□□□ -2.47
TRA2A-210ENST00000497730 IGLC1P0CG04 106 aa-0.36□□□□□ -2.47
TRA2A-210ENST00000497730 GNG11P61952 73 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms