RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 C11orf86A6NJI1 115 aa8.48□□□□□ -1.05
SNRNP200-208ENST00000497539 RPL39P62891 51 aaKnown RBP8.48□□□□□ -1.05
SNRNP200-208ENST00000497539 ZANQ9Y493 2812 aa8.48□□□□□ -1.05
SNRNP200-208ENST00000497539 TCL1BO95988 128 aa8.47□□□□□ -1.05
SNRNP200-208ENST00000497539 PPP1R17O96001 155 aa8.47□□□□□ -1.05
SNRNP200-208ENST00000497539 TMEM61Q8N0U2 210 aa8.47□□□□□ -1.05
SNRNP200-208ENST00000497539 IL17DQ8TAD2 202 aa8.47□□□□□ -1.05
SNRNP200-208ENST00000497539 IGHV1OR15-1A0A075B7D0 117 aa8.47□□□□□ -1.05
SNRNP200-208ENST00000497539 H3BMM0 161 aa8.47□□□□□ -1.05
SNRNP200-208ENST00000497539 SLC25A20O43772 301 aa8.47□□□□□ -1.05
SNRNP200-208ENST00000497539 TSHBP01222 138 aa8.47□□□□□ -1.05
SNRNP200-208ENST00000497539 CD28P10747 220 aa8.47□□□□□ -1.05
SNRNP200-208ENST00000497539 LINC00315P59091 139 aa8.47□□□□□ -1.05
SNRNP200-208ENST00000497539 TRAV12-3A0A0B4J271 114 aa8.46□□□□□ -1.06
SNRNP200-208ENST00000497539 UBE2D1P51668 147 aa8.46□□□□□ -1.06
SNRNP200-208ENST00000497539 TSPEAR-AS2P59090 65 aa8.46□□□□□ -1.06
SNRNP200-208ENST00000497539 DYNLRB2Q8TF09 96 aa8.46□□□□□ -1.06
SNRNP200-208ENST00000497539 MAP6D1Q9H9H5 199 aa8.46□□□□□ -1.06
SNRNP200-208ENST00000497539 MUC4Q99102 2169 aa8.46□□□□□ -1.06
SNRNP200-208ENST00000497539 A0A087WWL8 130 aa8.46□□□□□ -1.06
SNRNP200-208ENST00000497539 CCL24O00175 119 aa8.46□□□□□ -1.06
SNRNP200-208ENST00000497539 PIK3CD-AS1Q5SR53 167 aa8.46□□□□□ -1.06
SNRNP200-208ENST00000497539 ZNF256Q9Y2P7 627 aaPredicted RBP8.46□□□□□ -1.06
SNRNP200-208ENST00000497539 MXRA5Q9NR99 2828 aa8.45□□□□□ -1.06
SNRNP200-208ENST00000497539 TEX15Q9BXT5 2789 aa8.45□□□□□ -1.06
SNRNP200-208ENST00000497539 TRAV13-1A0A0B4J241 112 aa8.45□□□□□ -1.06
SNRNP200-208ENST00000497539 EPM2AB3EWF7 344 aa8.45□□□□□ -1.06
SNRNP200-208ENST00000497539 TMEM170BQ5T4T1 132 aa8.45□□□□□ -1.06
SNRNP200-208ENST00000497539 IGLV4-69A0A075B6H9 119 aa8.45□□□□□ -1.06
SNRNP200-208ENST00000497539 H7C2G1 150 aa8.45□□□□□ -1.06
SNRNP200-208ENST00000497539 KHDC1LQ5JSQ8 128 aa8.45□□□□□ -1.06
SNRNP200-208ENST00000497539 CEMP1Q6PRD7 247 aaPredicted RBP8.45□□□□□ -1.06
SNRNP200-208ENST00000497539 NDUFA11Q86Y39 141 aa8.45□□□□□ -1.06
SNRNP200-208ENST00000497539 OPRPNQ99935 248 aaPredicted RBP8.45□□□□□ -1.06
SNRNP200-208ENST00000497539 HECTD1Q9ULT8 2610 aa8.45□□□□□ -1.06
SNRNP200-208ENST00000497539 A0A0J9YY99 117 aa8.44□□□□□ -1.06
SNRNP200-208ENST00000497539 F5H697 171 aa8.44□□□□□ -1.06
SNRNP200-208ENST00000497539 DEFB131AP59861 70 aa8.44□□□□□ -1.06
SNRNP200-208ENST00000497539 ANK3Q12955 4377 aaKnown RBP8.44□□□□□ -1.06
SNRNP200-208ENST00000497539 IGHV3-64A0A075B6Q5 118 aa8.44□□□□□ -1.06
SNRNP200-208ENST00000497539 RBMY1BA6NDE4 496 aaKnown RBP8.44□□□□□ -1.06
SNRNP200-208ENST00000497539 RBMY1EA6NEQ0 496 aaKnown RBP8.44□□□□□ -1.06
SNRNP200-208ENST00000497539 RBMY1DP0C7P1 496 aaKnown RBP8.44□□□□□ -1.06
SNRNP200-208ENST00000497539 CFC1BP0CG36 223 aa8.44□□□□□ -1.06
SNRNP200-208ENST00000497539 CFC1P0CG37 223 aa8.44□□□□□ -1.06
SNRNP200-208ENST00000497539 PROK1P58294 105 aa8.44□□□□□ -1.06
SNRNP200-208ENST00000497539 SPINK13Q1W4C9 94 aa8.44□□□□□ -1.06
SNRNP200-208ENST00000497539 ADARB2-AS1A8MUL3 147 aa8.43□□□□□ -1.06
SNRNP200-208ENST00000497539 CMC4P56277 68 aaPredicted RBP8.43□□□□□ -1.06
SNRNP200-208ENST00000497539 DSCR8Q96T75 97 aa8.43□□□□□ -1.06
SNRNP200-208ENST00000497539 SORL1Q92673 2214 aa8.43□□□□□ -1.06
SNRNP200-208ENST00000497539 NBPF19A0A087WUL8 3843 aa8.43□□□□□ -1.06
SNRNP200-208ENST00000497539 TRBV6-5A0A0K0K1A5 114 aa8.42□□□□□ -1.06
SNRNP200-208ENST00000497539 hADV29S1A0JD25 119 aa8.42□□□□□ -1.06
SNRNP200-208ENST00000497539 KNCNA6PVL3 124 aa8.42□□□□□ -1.06
SNRNP200-208ENST00000497539 NTN5Q8WTR8 489 aaPredicted RBP8.42□□□□□ -1.06
SNRNP200-208ENST00000497539 TRAV12-2A0A075B6T6 113 aa8.42□□□□□ -1.06
SNRNP200-208ENST00000497539 LY6G6DO95868 133 aa8.42□□□□□ -1.06
SNRNP200-208ENST00000497539 RBMY1A1P0DJD3 496 aaKnown RBP8.42□□□□□ -1.06
SNRNP200-208ENST00000497539 RBMY1CP0DJD4 496 aa8.42□□□□□ -1.06
SNRNP200-208ENST00000497539 RBMY1FQ15415 496 aaKnown RBP8.42□□□□□ -1.06
SNRNP200-208ENST00000497539 ZNF56Q15929 161 aa8.42□□□□□ -1.06
SNRNP200-208ENST00000497539 FAM74A4Q5TZK3 123 aa8.42□□□□□ -1.06
SNRNP200-208ENST00000497539 FLNBO75369 2602 aaKnown RBP8.41□□□□□ -1.06
SNRNP200-208ENST00000497539 IGIPA6NJ69 53 aa8.41□□□□□ -1.06
SNRNP200-208ENST00000497539 IGHV3-30P01768 117 aa8.41□□□□□ -1.06
SNRNP200-208ENST00000497539 IGHV3-30-5P0DP03 117 aa8.41□□□□□ -1.06
SNRNP200-208ENST00000497539 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
SNRNP200-208ENST00000497539 ZNF469Q96JG9 3925 aaPredicted RBP8.41□□□□□ -1.06
SNRNP200-208ENST00000497539 AKAP9Q99996 3911 aa8.41□□□□□ -1.06
SNRNP200-208ENST00000497539 ODF3L2Q3SX64 289 aa8.4□□□□□ -1.06
SNRNP200-208ENST00000497539 DEFB121Q5J5C9 76 aa8.4□□□□□ -1.06
SNRNP200-208ENST00000497539 SUMO4Q6EEV6 95 aa8.4□□□□□ -1.06
SNRNP200-208ENST00000497539 FLNAP21333 2647 aaKnown RBP8.4□□□□□ -1.06
SNRNP200-208ENST00000497539 UNC79Q9P2D8 2635 aa8.4□□□□□ -1.06
SNRNP200-208ENST00000497539 IGKV3-20P01619 116 aa8.4□□□□□ -1.07
SNRNP200-208ENST00000497539 HERVK_113P61574 105 aa8.4□□□□□ -1.07
SNRNP200-208ENST00000497539 CYSTM1Q9H1C7 97 aa8.39□□□□□ -1.07
SNRNP200-208ENST00000497539 CUBNO60494 3623 aa8.39□□□□□ -1.07
SNRNP200-208ENST00000497539 SDHAF1A6NFY7 115 aa8.39□□□□□ -1.07
SNRNP200-208ENST00000497539 EIF4EBP3O60516 100 aaPredicted RBP8.39□□□□□ -1.07
SNRNP200-208ENST00000497539 POLR2KP53803 58 aaKnown RBP8.39□□□□□ -1.07
SNRNP200-208ENST00000497539 SLC25A29Q8N8R3 303 aa8.39□□□□□ -1.07
SNRNP200-208ENST00000497539 INSP01308 110 aa8.38□□□□□ -1.07
SNRNP200-208ENST00000497539 IGLV1-51P01701 117 aa8.38□□□□□ -1.07
SNRNP200-208ENST00000497539 CXCL5P42830 114 aa8.38□□□□□ -1.07
SNRNP200-208ENST00000497539 HIST1H4AP62805 103 aaKnown RBP8.38□□□□□ -1.07
SNRNP200-208ENST00000497539 UPK3BQ9BT76 320 aa8.38□□□□□ -1.07
SNRNP200-208ENST00000497539 PRO1854Q9UHT4 67 aa8.38□□□□□ -1.07
SNRNP200-208ENST00000497539 RETNQ9HD89 108 aa8.38□□□□□ -1.07
SNRNP200-208ENST00000497539 ATOX1O00244 68 aa8.37□□□□□ -1.07
SNRNP200-208ENST00000497539 C5orf38Q86SI9 138 aa8.37□□□□□ -1.07
SNRNP200-208ENST00000497539 AMELXQ99217 191 aa8.37□□□□□ -1.07
SNRNP200-208ENST00000497539 TRBV27A0A0K0K1C4 114 aa8.37□□□□□ -1.07
SNRNP200-208ENST00000497539 LGALS3P17931 250 aaKnown RBP8.37□□□□□ -1.07
SNRNP200-208ENST00000497539 BEAN1Q3B7T3 259 aa8.37□□□□□ -1.07
SNRNP200-208ENST00000497539 SMR3AQ99954 134 aa8.37□□□□□ -1.07
SNRNP200-208ENST00000497539 NDUFC2-KCTD14E9PQ53 114 aa8.36□□□□□ -1.07
SNRNP200-208ENST00000497539 M0QY20 66 aa8.36□□□□□ -1.07
SNRNP200-208ENST00000497539 VCYO14598 125 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms