RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CNFNQ9BYD5 112 aa8.74□□□□□ -1.01
VARS-228ENST00000495010 RPP21Q9H633 154 aaKnown RBP8.74□□□□□ -1.01
VARS-228ENST00000495010 IGLV4-69A0A075B6H9 119 aa8.73□□□□□ -1.01
VARS-228ENST00000495010 A0A1W2PNN7 141 aa8.73□□□□□ -1.01
VARS-228ENST00000495010 BCL2P10415 239 aa8.73□□□□□ -1.01
VARS-228ENST00000495010 MEF2BQ02080 365 aaPredicted RBP8.73□□□□□ -1.01
VARS-228ENST00000495010 CAMK2N2Q96S95 79 aa8.73□□□□□ -1.01
VARS-228ENST00000495010 TRAV1-1A0A0B4J248 108 aa8.72□□□□□ -1.01
VARS-228ENST00000495010 RPL18AQ02543 176 aaKnown RBP8.72□□□□□ -1.01
VARS-228ENST00000495010 C9orf116Q5BN46 136 aaPredicted RBP8.72□□□□□ -1.01
VARS-228ENST00000495010 TRBV20OR9-2A0A075B6H5 130 aa8.71□□□□□ -1.02
VARS-228ENST00000495010 HMSDA8MTL9 139 aa8.71□□□□□ -1.02
VARS-228ENST00000495010 COX7A2LO14548 114 aa8.71□□□□□ -1.02
VARS-228ENST00000495010 APOMO95445 188 aa8.71□□□□□ -1.02
VARS-228ENST00000495010 FOXA3P55318 350 aaPredicted RBP8.71□□□□□ -1.02
VARS-228ENST00000495010 PRR26Q8N8Z3 221 aa8.71□□□□□ -1.02
VARS-228ENST00000495010 NUP35Q8NFH5 326 aa8.71□□□□□ -1.02
VARS-228ENST00000495010 DIRC1Q969H9 104 aa8.71□□□□□ -1.02
VARS-228ENST00000495010 RNASE7Q9H1E1 156 aaKnown RBP8.71□□□□□ -1.02
VARS-228ENST00000495010 ST20Q9HBF5 79 aa8.71□□□□□ -1.02
VARS-228ENST00000495010 CDC42SE2Q9NRR3 84 aa8.71□□□□□ -1.02
VARS-228ENST00000495010 TMEM242Q9NWH2 141 aa8.71□□□□□ -1.02
VARS-228ENST00000495010 ESDP10768 282 aa8.7□□□□□ -1.02
VARS-228ENST00000495010 PHF5AQ7RTV0 110 aaKnown RBP8.7□□□□□ -1.02
VARS-228ENST00000495010 FAM210AQ96ND0 272 aa8.7□□□□□ -1.02
VARS-228ENST00000495010 TRBV6-5A0A0K0K1A5 114 aa8.69□□□□□ -1.02
VARS-228ENST00000495010 C1orf196B1AJZ1 125 aa8.69□□□□□ -1.02
VARS-228ENST00000495010 TSHBP01222 138 aa8.69□□□□□ -1.02
VARS-228ENST00000495010 MRPL52Q86TS9 123 aaKnown RBP8.69□□□□□ -1.02
VARS-228ENST00000495010 A0A0U1RQV1 116 aa8.68□□□□□ -1.02
VARS-228ENST00000495010 C7orf77A4D0Y5 90 aa8.68□□□□□ -1.02
VARS-228ENST00000495010 TSKUQ8WUA8 353 aa8.68□□□□□ -1.02
VARS-228ENST00000495010 BORCS7Q96B45 105 aa8.68□□□□□ -1.02
VARS-228ENST00000495010 C2orf48Q96LS8 159 aa8.68□□□□□ -1.02
VARS-228ENST00000495010 LPAP08519 4548 aa8.68□□□□□ -1.02
VARS-228ENST00000495010 A0A087WZ39 114 aa8.67□□□□□ -1.02
VARS-228ENST00000495010 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.67□□□□□ -1.02
VARS-228ENST00000495010 IGLV7-43P04211 117 aa8.67□□□□□ -1.02
VARS-228ENST00000495010 SMAGPQ0VAQ4 97 aa8.67□□□□□ -1.02
VARS-228ENST00000495010 RGS21Q2M5E4 152 aa8.67□□□□□ -1.02
VARS-228ENST00000495010 GATCO43716 136 aaKnown RBP8.66□□□□□ -1.02
VARS-228ENST00000495010 FCER1GP30273 86 aa8.66□□□□□ -1.02
VARS-228ENST00000495010 PRR4Q16378 134 aa8.66□□□□□ -1.02
VARS-228ENST00000495010 OCC1Q8TAD7 63 aa8.66□□□□□ -1.02
VARS-228ENST00000495010 OPRPNQ99935 248 aaPredicted RBP8.66□□□□□ -1.02
VARS-228ENST00000495010 TRAV13-1A0A0B4J241 112 aa8.65□□□□□ -1.02
VARS-228ENST00000495010 A8MWL6 223 aa8.65□□□□□ -1.02
VARS-228ENST00000495010 H0Y9J4 135 aa8.65□□□□□ -1.02
VARS-228ENST00000495010 K7EN84 100 aa8.65□□□□□ -1.02
VARS-228ENST00000495010 UBE2D1P51668 147 aa8.65□□□□□ -1.02
VARS-228ENST00000495010 C5orf38Q86SI9 138 aa8.65□□□□□ -1.02
VARS-228ENST00000495010 IGLV1-50A0A075B6I6 118 aa8.64□□□□□ -1.03
VARS-228ENST00000495010 TAGLN2P37802 199 aaKnown RBP8.64□□□□□ -1.03
VARS-228ENST00000495010 POLR2KP53803 58 aaKnown RBP8.64□□□□□ -1.03
VARS-228ENST00000495010 SPAG11BQ08648 103 aa8.64□□□□□ -1.03
VARS-228ENST00000495010 RNF151Q2KHN1 245 aa8.64□□□□□ -1.03
VARS-228ENST00000495010 TRBV27A0A0K0K1C4 114 aa8.63□□□□□ -1.03
VARS-228ENST00000495010 RNASE13Q5GAN3 156 aaKnown RBP8.63□□□□□ -1.03
VARS-228ENST00000495010 IMMP2LQ96T52 175 aa8.63□□□□□ -1.03
VARS-228ENST00000495010 VCYO14598 125 aa8.62□□□□□ -1.03
VARS-228ENST00000495010 CSDC2Q9Y534 153 aaKnown RBP8.62□□□□□ -1.03
VARS-228ENST00000495010 OR10D4PQ8NGN7 298 aa8.61□□□□□ -1.03
VARS-228ENST00000495010 TMEM18Q96B42 140 aa8.61□□□□□ -1.03
VARS-228ENST00000495010 KIR2DL4Q99706 377 aa8.61□□□□□ -1.03
VARS-228ENST00000495010 TMEM191AQ9H0A3 160 aa8.61□□□□□ -1.03
VARS-228ENST00000495010 UBE2D4Q9Y2X8 147 aa8.61□□□□□ -1.03
VARS-228ENST00000495010 A0A1B0GUT8 65 aa8.6□□□□□ -1.03
VARS-228ENST00000495010 RAB4AP20338 218 aa8.6□□□□□ -1.03
VARS-228ENST00000495010 RPL13AP40429 203 aaKnown RBP8.6□□□□□ -1.03
VARS-228ENST00000495010 FAM231DQ6ZW35 169 aa8.6□□□□□ -1.03
VARS-228ENST00000495010 FAM19A5Q7Z5A7 132 aaPredicted RBP8.6□□□□□ -1.03
VARS-228ENST00000495010 ORAOV1Q8WV07 137 aa8.6□□□□□ -1.03
VARS-228ENST00000495010 MRPL35Q9NZE8 188 aaKnown RBP8.6□□□□□ -1.03
VARS-228ENST00000495010 FAM168BA1KXE4 195 aa8.59□□□□□ -1.03
VARS-228ENST00000495010 F8WDY8 70 aa8.59□□□□□ -1.03
VARS-228ENST00000495010 NDUFA1O15239 70 aa8.59□□□□□ -1.03
VARS-228ENST00000495010 PPP1R17O96001 155 aa8.59□□□□□ -1.03
VARS-228ENST00000495010 UBE2BP63146 152 aa8.59□□□□□ -1.03
VARS-228ENST00000495010 CT83Q5H943 113 aa8.59□□□□□ -1.03
VARS-228ENST00000495010 KRTAP9-2Q9BYQ4 174 aa8.59□□□□□ -1.03
VARS-228ENST00000495010 TMEM241Q24JQ0 296 aa8.58□□□□□ -1.04
VARS-228ENST00000495010 GAGE2EQ4V326 116 aa8.58□□□□□ -1.04
VARS-228ENST00000495010 Q6ZUT4 128 aa8.58□□□□□ -1.04
VARS-228ENST00000495010 AMN1Q8IY45 258 aa8.58□□□□□ -1.04
VARS-228ENST00000495010 GAGE2DQ9UEU5 116 aa8.58□□□□□ -1.04
VARS-228ENST00000495010 HIGD1CA8MV81 97 aa8.57□□□□□ -1.04
VARS-228ENST00000495010 SMKR1H3BMG3 65 aa8.57□□□□□ -1.04
VARS-228ENST00000495010 CEBPGP53567 150 aa8.57□□□□□ -1.04
VARS-228ENST00000495010 SUMO2P61956 95 aaKnown RBP8.57□□□□□ -1.04
VARS-228ENST00000495010 KRTAP1-4P0C5Y4 121 aa8.56□□□□□ -1.04
VARS-228ENST00000495010 KRTAP11-1Q8IUC1 163 aa8.56□□□□□ -1.04
VARS-228ENST00000495010 TIMM21Q9BVV7 248 aa8.56□□□□□ -1.04
VARS-228ENST00000495010 TMEM250H0YL14 139 aa8.55□□□□□ -1.04
VARS-228ENST00000495010 M0QXV9 152 aa8.55□□□□□ -1.04
VARS-228ENST00000495010 PPP1R2P9O14990 202 aa8.55□□□□□ -1.04
VARS-228ENST00000495010 TLX1NBP0CAT3 122 aa8.55□□□□□ -1.04
VARS-228ENST00000495010 RIGQ13278 110 aa8.54□□□□□ -1.04
VARS-228ENST00000495010 UNQ6190/PRO20217Q6UXQ8 127 aa8.54□□□□□ -1.04
VARS-228ENST00000495010 CARHSP1Q9Y2V2 147 aaKnown RBP8.54□□□□□ -1.04
VARS-228ENST00000495010 C10orf25Q5T742 122 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms