RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 TEX46H3BTG2 121 aa8.41□□□□□ -1.06
CHMP2B-205ENST00000494980 NKX2-5P52952 324 aaPredicted RBP8.41□□□□□ -1.06
CHMP2B-205ENST00000494980 KRTAP19-2Q3LHN2 52 aa8.41□□□□□ -1.06
CHMP2B-205ENST00000494980 LINC00173Q6ZV60 143 aa8.41□□□□□ -1.06
CHMP2B-205ENST00000494980 OR2D3Q8NGH3 330 aa8.41□□□□□ -1.06
CHMP2B-205ENST00000494980 PPDPFQ9H3Y8 114 aa8.41□□□□□ -1.06
CHMP2B-205ENST00000494980 NIT2Q9NQR4 276 aa8.41□□□□□ -1.06
CHMP2B-205ENST00000494980 BCL2L11O43521 198 aa8.4□□□□□ -1.06
CHMP2B-205ENST00000494980 COTL1Q14019 142 aa8.4□□□□□ -1.06
CHMP2B-205ENST00000494980 CENPWQ5EE01 88 aa8.4□□□□□ -1.06
CHMP2B-205ENST00000494980 A0A087X002 238 aa8.39□□□□□ -1.07
CHMP2B-205ENST00000494980 LOC107984640A0A0U1RRK4 108 aa8.39□□□□□ -1.07
CHMP2B-205ENST00000494980 C19orf71A6NCJ1 209 aa8.39□□□□□ -1.07
CHMP2B-205ENST00000494980 GNG4P50150 75 aa8.39□□□□□ -1.07
CHMP2B-205ENST00000494980 CCL20P78556 96 aa8.39□□□□□ -1.07
CHMP2B-205ENST00000494980 GNG13Q9P2W3 67 aa8.39□□□□□ -1.07
CHMP2B-205ENST00000494980 IGKV3OR2-268A0A0C4DH90 116 aa8.38□□□□□ -1.07
CHMP2B-205ENST00000494980 PDE6DO43924 150 aa8.38□□□□□ -1.07
CHMP2B-205ENST00000494980 IFNA1P01562 189 aa8.38□□□□□ -1.07
CHMP2B-205ENST00000494980 EIF5AL1Q6IS14 154 aaKnown RBP8.38□□□□□ -1.07
CHMP2B-205ENST00000494980 TYMSOSQ8TAI1 123 aa8.38□□□□□ -1.07
CHMP2B-205ENST00000494980 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
CHMP2B-205ENST00000494980 SMLR1H3BR10 107 aa8.37□□□□□ -1.07
CHMP2B-205ENST00000494980 C9orf62Q8N4C0 152 aa8.37□□□□□ -1.07
CHMP2B-205ENST00000494980 BCL2P10415 239 aa8.36□□□□□ -1.07
CHMP2B-205ENST00000494980 NTF3P20783 257 aa8.36□□□□□ -1.07
CHMP2B-205ENST00000494980 SEC61BP60468 96 aaKnown RBP8.36□□□□□ -1.07
CHMP2B-205ENST00000494980 MEF2BQ02080 365 aaPredicted RBP8.36□□□□□ -1.07
CHMP2B-205ENST00000494980 SYCNQ0VAF6 134 aa8.36□□□□□ -1.07
CHMP2B-205ENST00000494980 LYZL1Q6UWQ5 148 aa8.36□□□□□ -1.07
CHMP2B-205ENST00000494980 CHCHD10Q8WYQ3 142 aaPredicted RBP8.36□□□□□ -1.07
CHMP2B-205ENST00000494980 H7C423 109 aa8.35□□□□□ -1.07
CHMP2B-205ENST00000494980 NCR2O95944 276 aa8.35□□□□□ -1.07
CHMP2B-205ENST00000494980 CTRLP40313 264 aa8.35□□□□□ -1.07
CHMP2B-205ENST00000494980 CNFNQ9BYD5 112 aa8.35□□□□□ -1.07
CHMP2B-205ENST00000494980 FLGP20930 4061 aaPredicted RBP8.34□□□□□ -1.07
CHMP2B-205ENST00000494980 GHRHP01286 108 aa8.34□□□□□ -1.07
CHMP2B-205ENST00000494980 FGF6P10767 208 aa8.34□□□□□ -1.07
CHMP2B-205ENST00000494980 TAGLN2P37802 199 aaKnown RBP8.34□□□□□ -1.07
CHMP2B-205ENST00000494980 TWIST1Q15672 202 aa8.34□□□□□ -1.07
CHMP2B-205ENST00000494980 AMMECR1LQ6DCA0 310 aa8.34□□□□□ -1.07
CHMP2B-205ENST00000494980 TEX261Q6UWH6 196 aa8.34□□□□□ -1.07
CHMP2B-205ENST00000494980 SMIM15Q7Z3B0 74 aa8.34□□□□□ -1.07
CHMP2B-205ENST00000494980 LINC00337Q8N6G1 96 aa8.34□□□□□ -1.07
CHMP2B-205ENST00000494980 RAB19A4D1S5 217 aa8.33□□□□□ -1.08
CHMP2B-205ENST00000494980 FAM210AQ96ND0 272 aa8.33□□□□□ -1.08
CHMP2B-205ENST00000494980 MED9Q9NWA0 146 aa8.33□□□□□ -1.08
CHMP2B-205ENST00000494980 ZNF25P17030 456 aaPredicted RBP8.32□□□□□ -1.08
CHMP2B-205ENST00000494980 M0R2T5 61 aa8.31□□□□□ -1.08
CHMP2B-205ENST00000494980 APCSP02743 223 aa8.31□□□□□ -1.08
CHMP2B-205ENST00000494980 RPL18AQ02543 176 aaKnown RBP8.31□□□□□ -1.08
CHMP2B-205ENST00000494980 FOXI1Q12951 378 aa8.31□□□□□ -1.08
CHMP2B-205ENST00000494980 GATD1Q8NB37 220 aa8.31□□□□□ -1.08
CHMP2B-205ENST00000494980 NUDT10Q8NFP7 164 aa8.31□□□□□ -1.08
CHMP2B-205ENST00000494980 NUDT11Q96G61 164 aa8.31□□□□□ -1.08
CHMP2B-205ENST00000494980 TRBV20OR9-2A0A075B6H5 130 aa8.3□□□□□ -1.08
CHMP2B-205ENST00000494980 IGHV1-58A0A0C4DH39 117 aa8.3□□□□□ -1.08
CHMP2B-205ENST00000494980 RNASEKQ6P5S7 137 aaKnown RBP8.3□□□□□ -1.08
CHMP2B-205ENST00000494980 LINC00304Q8N9R0 145 aa8.3□□□□□ -1.08
CHMP2B-205ENST00000494980 TSKUQ8WUA8 353 aa8.3□□□□□ -1.08
CHMP2B-205ENST00000494980 TMEM101Q96IK0 257 aa8.29□□□□□ -1.08
CHMP2B-205ENST00000494980 BTF3L4Q96K17 158 aa8.29□□□□□ -1.08
CHMP2B-205ENST00000494980 FAM168BA1KXE4 195 aa8.28□□□□□ -1.08
CHMP2B-205ENST00000494980 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.28□□□□□ -1.08
CHMP2B-205ENST00000494980 ZNF561-AS1K7EIQ3 104 aa8.28□□□□□ -1.08
CHMP2B-205ENST00000494980 APOMO95445 188 aa8.28□□□□□ -1.08
CHMP2B-205ENST00000494980 TSHBP01222 138 aa8.28□□□□□ -1.08
CHMP2B-205ENST00000494980 CAMPP49913 170 aa8.28□□□□□ -1.08
CHMP2B-205ENST00000494980 KRTAP13-3Q3SY46 172 aa8.28□□□□□ -1.08
CHMP2B-205ENST00000494980 Q6ZNX1 250 aa8.28□□□□□ -1.08
CHMP2B-205ENST00000494980 OR5A1Q8NGJ0 315 aa8.28□□□□□ -1.08
CHMP2B-205ENST00000494980 SDHAF1A6NFY7 115 aa8.27□□□□□ -1.09
CHMP2B-205ENST00000494980 I3L3M4 83 aa8.27□□□□□ -1.09
CHMP2B-205ENST00000494980 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.26□□□□□ -1.09
CHMP2B-205ENST00000494980 IGKV2-29A2NJV5 120 aaPredicted RBP8.26□□□□□ -1.09
CHMP2B-205ENST00000494980 RPL39LQ96EH5 51 aaKnown RBP8.26□□□□□ -1.09
CHMP2B-205ENST00000494980 RNASE7Q9H1E1 156 aaKnown RBP8.26□□□□□ -1.09
CHMP2B-205ENST00000494980 TRBV6-5A0A0K0K1A5 114 aa8.25□□□□□ -1.09
CHMP2B-205ENST00000494980 ZNF861PO60384 105 aa8.25□□□□□ -1.09
CHMP2B-205ENST00000494980 PMCHP20382 165 aa8.25□□□□□ -1.09
CHMP2B-205ENST00000494980 XCL1P47992 114 aa8.25□□□□□ -1.09
CHMP2B-205ENST00000494980 UBE2BP63146 152 aa8.25□□□□□ -1.09
CHMP2B-205ENST00000494980 FAM19A5Q7Z5A7 132 aaPredicted RBP8.25□□□□□ -1.09
CHMP2B-205ENST00000494980 SLC51BQ86UW2 128 aa8.25□□□□□ -1.09
CHMP2B-205ENST00000494980 OCC1Q8TAD7 63 aa8.25□□□□□ -1.09
CHMP2B-205ENST00000494980 ISOC2Q96AB3 205 aa8.25□□□□□ -1.09
CHMP2B-205ENST00000494980 MRAP2Q96G30 205 aa8.25□□□□□ -1.09
CHMP2B-205ENST00000494980 LINC00959A0A1B0GUT2 108 aa8.24□□□□□ -1.09
CHMP2B-205ENST00000494980 A8MWL6 223 aa8.24□□□□□ -1.09
CHMP2B-205ENST00000494980 SS18Q15532 418 aa8.24□□□□□ -1.09
CHMP2B-205ENST00000494980 KRTAP13-2Q52LG2 175 aa8.24□□□□□ -1.09
CHMP2B-205ENST00000494980 CT83Q5H943 113 aa8.24□□□□□ -1.09
CHMP2B-205ENST00000494980 NUP35Q8NFH5 326 aa8.24□□□□□ -1.09
CHMP2B-205ENST00000494980 BORCS7Q96B45 105 aa8.24□□□□□ -1.09
CHMP2B-205ENST00000494980 TMEM250H0YL14 139 aa8.23□□□□□ -1.09
CHMP2B-205ENST00000494980 K7EN84 100 aa8.23□□□□□ -1.09
CHMP2B-205ENST00000494980 CCL25O15444 150 aa8.23□□□□□ -1.09
CHMP2B-205ENST00000494980 ESDP10768 282 aa8.23□□□□□ -1.09
CHMP2B-205ENST00000494980 FOXA3P55318 350 aaPredicted RBP8.23□□□□□ -1.09
CHMP2B-205ENST00000494980 CD164L2Q6UWJ8 174 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms