RNA–Protein interactions for RNA: ENST00000494707.5

RPGR-209, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 5

Gene RPGR, Length 426 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-209ENST00000494707 Q6AWC8 147 aa-0.64□□□□□ -2.51
RPGR-209ENST00000494707 RERGLQ9H628 205 aa-0.64□□□□□ -2.51
RPGR-209ENST00000494707 HERC1Q15751 4861 aa-0.64□□□□□ -2.51
RPGR-209ENST00000494707 MAP1BP46821 2468 aaKnown RBP-0.64□□□□□ -2.51
RPGR-209ENST00000494707 ACANP16112 2415 aa-0.65□□□□□ -2.51
RPGR-209ENST00000494707 CREBBPQ92793 2442 aa-0.65□□□□□ -2.51
RPGR-209ENST00000494707 MGST2Q99735 147 aa-0.65□□□□□ -2.51
RPGR-209ENST00000494707 DYNLRB1Q9NP97 96 aa-0.65□□□□□ -2.51
RPGR-209ENST00000494707 NDUFA4L2Q9NRX3 87 aa-0.65□□□□□ -2.51
RPGR-209ENST00000494707 SERP1Q9Y6X1 66 aa-0.65□□□□□ -2.51
RPGR-209ENST00000494707 WDR7Q9Y4E6 1490 aa-0.66□□□□□ -2.51
RPGR-209ENST00000494707 PIEZO2Q9H5I5 2752 aa-0.66□□□□□ -2.51
RPGR-209ENST00000494707 SETXQ7Z333 2677 aaKnown RBP-0.66□□□□□ -2.51
RPGR-209ENST00000494707 IGLC7A0M8Q6 106 aa-0.66□□□□□ -2.52
RPGR-209ENST00000494707 KRTAP19-8Q3LI54 63 aa-0.66□□□□□ -2.52
RPGR-209ENST00000494707 LSM10Q969L4 123 aaKnown RBP-0.66□□□□□ -2.52
RPGR-209ENST00000494707 LINC01558Q9Y6Z2 57 aa-0.66□□□□□ -2.52
RPGR-209ENST00000494707 MYH6P13533 1939 aa-0.66□□□□□ -2.52
RPGR-209ENST00000494707 NBEAL1Q6ZS30 2694 aa-0.66□□□□□ -2.52
RPGR-209ENST00000494707 PLXNB2O15031 1838 aa-0.66□□□□□ -2.52
RPGR-209ENST00000494707 USF3Q68DE3 2245 aa-0.66□□□□□ -2.52
RPGR-209ENST00000494707 NWD2Q9ULI1 1742 aa-0.67□□□□□ -2.52
RPGR-209ENST00000494707 GRIN2AQ12879 1464 aa-0.67□□□□□ -2.52
RPGR-209ENST00000494707 TRBV7-3A0A075B6L6 115 aa-0.67□□□□□ -2.52
RPGR-209ENST00000494707 LOC105371267A0A1B0GV96 52 aa-0.67□□□□□ -2.52
RPGR-209ENST00000494707 SPINK4O60575 86 aa-0.67□□□□□ -2.52
RPGR-209ENST00000494707 SELENOWP63302 87 aa-0.67□□□□□ -2.52
RPGR-209ENST00000494707 PPP3R2Q96LZ3 170 aa-0.67□□□□□ -2.52
RPGR-209ENST00000494707 SNRNP25Q9BV90 132 aaKnown RBP-0.67□□□□□ -2.52
RPGR-209ENST00000494707 MYOM3Q5VTT5 1437 aa-0.67□□□□□ -2.52
RPGR-209ENST00000494707 CFTRP13569 1480 aa-0.67□□□□□ -2.52
RPGR-209ENST00000494707 NF1P21359 2839 aa-0.68□□□□□ -2.52
RPGR-209ENST00000494707 STAB2Q8WWQ8 2551 aa-0.68□□□□□ -2.52
RPGR-209ENST00000494707 LOC285095A0A1B0GVY8 99 aa-0.68□□□□□ -2.52
RPGR-209ENST00000494707 CEP152O94986 1710 aa-0.68□□□□□ -2.52
RPGR-209ENST00000494707 PRDM2Q13029 1718 aa-0.68□□□□□ -2.52
RPGR-209ENST00000494707 DEFB123Q8N688 67 aa-0.68□□□□□ -2.52
RPGR-209ENST00000494707 NAA60Q9H7X0 242 aa-0.68□□□□□ -2.52
RPGR-209ENST00000494707 MAP1AP78559 2803 aaPredicted RBP-0.68□□□□□ -2.52
RPGR-209ENST00000494707 FAT1Q14517 4588 aa-0.68□□□□□ -2.52
RPGR-209ENST00000494707 SHANK2Q9UPX8 1470 aa-0.68□□□□□ -2.52
RPGR-209ENST00000494707 PLCE1Q9P212 2302 aa-0.69□□□□□ -2.52
RPGR-209ENST00000494707 KMT2CQ8NEZ4 4911 aaKnown RBP-0.69□□□□□ -2.52
RPGR-209ENST00000494707 FAM25AB3EWG3 89 aa-0.69□□□□□ -2.52
RPGR-209ENST00000494707 FAM25CB3EWG5 89 aa-0.69□□□□□ -2.52
RPGR-209ENST00000494707 FAM25GB3EWG6 89 aa-0.69□□□□□ -2.52
RPGR-209ENST00000494707 MEIG1Q5JSS6 88 aa-0.69□□□□□ -2.52
RPGR-209ENST00000494707 WNK1Q9H4A3 2382 aa-0.7□□□□□ -2.52
RPGR-209ENST00000494707 PAPPAQ13219 1627 aa-0.7□□□□□ -2.52
RPGR-209ENST00000494707 HMGN4O00479 90 aa-0.7□□□□□ -2.52
RPGR-209ENST00000494707 SFT2D2O95562 160 aa-0.7□□□□□ -2.52
RPGR-209ENST00000494707 TSLPQ969D9 159 aa-0.7□□□□□ -2.52
RPGR-209ENST00000494707 ARL11Q969Q4 196 aa-0.7□□□□□ -2.52
RPGR-209ENST00000494707 SPANXDQ9BXN6 97 aa-0.7□□□□□ -2.52
RPGR-209ENST00000494707 FXYD6Q9H0Q3 95 aa-0.7□□□□□ -2.52
RPGR-209ENST00000494707 ARAP2Q8WZ64 1704 aa-0.7□□□□□ -2.52
RPGR-209ENST00000494707 FLNBO75369 2602 aaKnown RBP-0.7□□□□□ -2.52
RPGR-209ENST00000494707 POLA1P09884 1462 aaPredicted RBP-0.71□□□□□ -2.52
RPGR-209ENST00000494707 Q56UQ5 140 aa-0.71□□□□□ -2.52
RPGR-209ENST00000494707 MRPL54Q6P161 138 aaKnown RBP-0.71□□□□□ -2.52
RPGR-209ENST00000494707 LINC00470Q9BZP3 86 aa-0.71□□□□□ -2.52
RPGR-209ENST00000494707 CSPG4Q6UVK1 2322 aa-0.71□□□□□ -2.52
RPGR-209ENST00000494707 PKHD1P08F94 4074 aa-0.72□□□□□ -2.52
RPGR-209ENST00000494707 SPTBN1Q01082 2364 aaKnown RBP-0.72□□□□□ -2.52
RPGR-209ENST00000494707 ZNF236Q9UL36 1845 aa-0.72□□□□□ -2.52
RPGR-209ENST00000494707 MGPP08493 103 aa-0.72□□□□□ -2.52
RPGR-209ENST00000494707 C8orf59Q8N0T1 100 aaPredicted RBP-0.72□□□□□ -2.52
RPGR-209ENST00000494707 TMEM263Q8WUH6 116 aaKnown RBP-0.72□□□□□ -2.52
RPGR-209ENST00000494707 LAMA5O15230 3695 aa-0.73□□□□□ -2.53
RPGR-209ENST00000494707 MYO7BQ6PIF6 2116 aa-0.73□□□□□ -2.53
RPGR-209ENST00000494707 GAPVD1Q14C86 1478 aa-0.73□□□□□ -2.53
RPGR-209ENST00000494707 MIF4GDA9UHW6 222 aaKnown RBP-0.73□□□□□ -2.53
RPGR-209ENST00000494707 M0R2T5 61 aa-0.73□□□□□ -2.53
RPGR-209ENST00000494707 SSSCA1O60232 199 aa-0.73□□□□□ -2.53
RPGR-209ENST00000494707 GNG7O60262 68 aa-0.73□□□□□ -2.53
RPGR-209ENST00000494707 APOC2P02655 101 aa-0.73□□□□□ -2.53
RPGR-209ENST00000494707 BTG2P78543 158 aa-0.73□□□□□ -2.53
RPGR-209ENST00000494707 KRTAP20-2Q3LI61 65 aa-0.73□□□□□ -2.53
RPGR-209ENST00000494707 EP300Q09472 2414 aaPredicted RBP-0.73□□□□□ -2.53
RPGR-209ENST00000494707 PI4KAP42356 2102 aa-0.74□□□□□ -2.53
RPGR-209ENST00000494707 TRBV7-4A0A0J9YYF1 115 aa-0.74□□□□□ -2.53
RPGR-209ENST00000494707 IFNGP01579 166 aa-0.74□□□□□ -2.53
RPGR-209ENST00000494707 COMMD6Q7Z4G1 85 aa-0.74□□□□□ -2.53
RPGR-209ENST00000494707 C5orf38Q86SI9 138 aa-0.74□□□□□ -2.53
RPGR-209ENST00000494707 MYOZ3Q8TDC0 251 aa-0.74□□□□□ -2.53
RPGR-209ENST00000494707 FAIMQ9NVQ4 179 aa-0.74□□□□□ -2.53
RPGR-209ENST00000494707 FLGP20930 4061 aaPredicted RBP-0.74□□□□□ -2.53
RPGR-209ENST00000494707 CPSF1Q10570 1443 aaKnown RBP-0.74□□□□□ -2.53
RPGR-209ENST00000494707 KIF21AQ7Z4S6 1674 aa-0.75□□□□□ -2.53
RPGR-209ENST00000494707 SPEF2Q9C093 1822 aa-0.75□□□□□ -2.53
RPGR-209ENST00000494707 CHKB-CPT1BH3BT56 60 aa-0.75□□□□□ -2.53
RPGR-209ENST00000494707 CATR1Q13166 79 aa-0.75□□□□□ -2.53
RPGR-209ENST00000494707 WHAMMP3Q1A5X7 153 aa-0.75□□□□□ -2.53
RPGR-209ENST00000494707 CCDC58Q4VC31 144 aa-0.75□□□□□ -2.53
RPGR-209ENST00000494707 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.75□□□□□ -2.53
RPGR-209ENST00000494707 DEFB105AQ8NG35 78 aa-0.75□□□□□ -2.53
RPGR-209ENST00000494707 NXT2Q9NPJ8 142 aaKnown RBP-0.75□□□□□ -2.53
RPGR-209ENST00000494707 IGLC1P0CG04 106 aa-0.76□□□□□ -2.53
RPGR-209ENST00000494707 UBA52P62987 128 aaKnown RBP-0.76□□□□□ -2.53
RPGR-209ENST00000494707 C10orf113Q5VZT2 155 aa-0.76□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 1346 ms