RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 RAB14P61106 215 aa21.36■■□□□ 1.01
CBX4-203ENST00000494546 SDIM1Q6ZPB5 146 aa21.36■■□□□ 1.01
CBX4-203ENST00000494546 MRPL52Q86TS9 123 aaKnown RBP21.35■■□□□ 1.01
CBX4-203ENST00000494546 KIR2DL4Q99706 377 aa21.35■■□□□ 1.01
CBX4-203ENST00000494546 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP21.35■■□□□ 1.01
CBX4-203ENST00000494546 PPP1R2P9O14990 202 aa21.34■■□□□ 1.01
CBX4-203ENST00000494546 CKS2P33552 79 aa21.34■■□□□ 1.01
CBX4-203ENST00000494546 XCL1P47992 114 aa21.34■■□□□ 1.01
CBX4-203ENST00000494546 HBBP68871 147 aa21.34■■□□□ 1.01
CBX4-203ENST00000494546 HIGD2BQ4VC39 106 aa21.34■■□□□ 1.01
CBX4-203ENST00000494546 LINC00959A0A1B0GUT2 108 aa21.33■■□□□ 1.01
CBX4-203ENST00000494546 LINC00862A6NCI5 91 aa21.33■■□□□ 1.01
CBX4-203ENST00000494546 S100A8P05109 93 aa21.33■■□□□ 1.01
CBX4-203ENST00000494546 CDC42SE2Q9NRR3 84 aa21.33■■□□□ 1.01
CBX4-203ENST00000494546 FLG2Q5D862 2391 aaPredicted RBP21.32■■□□□ 1
CBX4-203ENST00000494546 FOXI1Q12951 378 aa21.32■■□□□ 1
CBX4-203ENST00000494546 IGHV3-64A0A075B6Q5 118 aa21.31■■□□□ 1
CBX4-203ENST00000494546 F8W036 122 aa21.31■■□□□ 1
CBX4-203ENST00000494546 PANO1I0J062 215 aa21.31■■□□□ 1
CBX4-203ENST00000494546 CCL25O15444 150 aa21.31■■□□□ 1
CBX4-203ENST00000494546 ZNF664Q8N3J9 261 aa21.31■■□□□ 1
CBX4-203ENST00000494546 C20orf78Q9BR46 151 aa21.3■■□□□ 1
CBX4-203ENST00000494546 A0A1B0GXF2 115 aa21.29■■□□□ 1
CBX4-203ENST00000494546 SS18Q15532 418 aa21.29■■□□□ 1
CBX4-203ENST00000494546 TRBV24-1A0A075B6N3 115 aa21.27■■□□□ 1
CBX4-203ENST00000494546 D6R8Y8 96 aa21.27■■□□□ 1
CBX4-203ENST00000494546 TNFRSF6BO95407 300 aa21.27■■□□□ 1
CBX4-203ENST00000494546 SMAGPQ0VAQ4 97 aa21.26■□□□□ 0.99
CBX4-203ENST00000494546 UBE2D4Q9Y2X8 147 aa21.26■□□□□ 0.99
CBX4-203ENST00000494546 GVQW2A0A096LPI5 108 aaPredicted RBP21.24■□□□□ 0.99
CBX4-203ENST00000494546 DPH3Q96FX2 82 aa21.24■□□□□ 0.99
CBX4-203ENST00000494546 RPL32P62910 135 aaKnown RBP21.23■□□□□ 0.99
CBX4-203ENST00000494546 PNRC1Q12796 327 aaPredicted RBP21.23■□□□□ 0.99
CBX4-203ENST00000494546 MYCBP2O75592 4640 aa21.22■□□□□ 0.99
CBX4-203ENST00000494546 NPYP01303 97 aa21.22■□□□□ 0.99
CBX4-203ENST00000494546 KRTAP10-4P60372 401 aaPredicted RBP21.22■□□□□ 0.99
CBX4-203ENST00000494546 RNASE13Q5GAN3 156 aaKnown RBP21.22■□□□□ 0.99
CBX4-203ENST00000494546 ATP5L2Q7Z4Y8 100 aa21.22■□□□□ 0.99
CBX4-203ENST00000494546 TMEM18Q96B42 140 aa21.22■□□□□ 0.99
CBX4-203ENST00000494546 SMIM2Q9BVW6 85 aa21.22■□□□□ 0.99
CBX4-203ENST00000494546 CSDC2Q9Y534 153 aaKnown RBP21.22■□□□□ 0.99
CBX4-203ENST00000494546 CHTF8P0CG12 524 aa21.21■□□□□ 0.99
CBX4-203ENST00000494546 CD164L2Q6UWJ8 174 aa21.21■□□□□ 0.99
CBX4-203ENST00000494546 PPBPP02775 128 aa21.2■□□□□ 0.98
CBX4-203ENST00000494546 CIRBPQ14011 172 aaKnown RBP21.2■□□□□ 0.98
CBX4-203ENST00000494546 IGHV1-58A0A0C4DH39 117 aa21.19■□□□□ 0.98
CBX4-203ENST00000494546 TCAPO15273 167 aa21.19■□□□□ 0.98
CBX4-203ENST00000494546 MT-ND4LP03901 98 aa21.19■□□□□ 0.98
CBX4-203ENST00000494546 RPL37AP61513 92 aaKnown RBP21.19■□□□□ 0.98
CBX4-203ENST00000494546 CLLU1Q5K131 121 aa21.19■□□□□ 0.98
CBX4-203ENST00000494546 COX6A2Q02221 97 aa21.18■□□□□ 0.98
CBX4-203ENST00000494546 ANAPC16Q96DE5 110 aa21.18■□□□□ 0.98
CBX4-203ENST00000494546 DMBT1Q9UGM3 2413 aaPredicted RBP21.17■□□□□ 0.98
CBX4-203ENST00000494546 Q6ZUT4 128 aa21.17■□□□□ 0.98
CBX4-203ENST00000494546 LINC00526Q96FQ7 95 aa21.17■□□□□ 0.98
CBX4-203ENST00000494546 TRAV13-1A0A0B4J241 112 aa21.16■□□□□ 0.98
CBX4-203ENST00000494546 C1orf196B1AJZ1 125 aa21.16■□□□□ 0.98
CBX4-203ENST00000494546 PHOX2AO14813 284 aa21.16■□□□□ 0.98
CBX4-203ENST00000494546 ORMDL3Q8N138 153 aa21.16■□□□□ 0.98
CBX4-203ENST00000494546 TIMM21Q9BVV7 248 aa21.16■□□□□ 0.98
CBX4-203ENST00000494546 RPL39P62891 51 aaKnown RBP21.15■□□□□ 0.98
CBX4-203ENST00000494546 TMEM136Q6ZRR5 245 aa21.15■□□□□ 0.98
CBX4-203ENST00000494546 SPACA4Q8TDM5 124 aa21.15■□□□□ 0.98
CBX4-203ENST00000494546 J3QL48 77 aa21.14■□□□□ 0.97
CBX4-203ENST00000494546 A0A087WYN8 130 aa21.13■□□□□ 0.97
CBX4-203ENST00000494546 PRSS3P2Q8NHM4 247 aa21.13■□□□□ 0.97
CBX4-203ENST00000494546 PRELID3AQ96N28 172 aa21.13■□□□□ 0.97
CBX4-203ENST00000494546 ZNF561-AS1K7EIQ3 104 aa21.11■□□□□ 0.97
CBX4-203ENST00000494546 MALP21145 153 aa21.11■□□□□ 0.97
CBX4-203ENST00000494546 IGKV2-24A0A0C4DH68 120 aa21.1■□□□□ 0.97
CBX4-203ENST00000494546 COX7A2LO14548 114 aa21.1■□□□□ 0.97
CBX4-203ENST00000494546 CARD19Q96LW7 228 aa21.08■□□□□ 0.97
CBX4-203ENST00000494546 SPANXA1Q9NS26 97 aa21.08■□□□□ 0.97
CBX4-203ENST00000494546 HERC1Q15751 4861 aa21.07■□□□□ 0.96
CBX4-203ENST00000494546 RAB5AP20339 215 aa21.07■□□□□ 0.96
CBX4-203ENST00000494546 MAJINQ3KP22 176 aa21.07■□□□□ 0.96
CBX4-203ENST00000494546 IFITM2Q01629 132 aa21.06■□□□□ 0.96
CBX4-203ENST00000494546 OPRPNQ99935 248 aaPredicted RBP21.06■□□□□ 0.96
CBX4-203ENST00000494546 KRTAP29-1A8MX34 341 aaPredicted RBP21.05■□□□□ 0.96
CBX4-203ENST00000494546 C5orf38Q86SI9 138 aa21.05■□□□□ 0.96
CBX4-203ENST00000494546 SYCNQ0VAF6 134 aa21.04■□□□□ 0.96
CBX4-203ENST00000494546 FAM104AQ969W3 186 aa21.04■□□□□ 0.96
CBX4-203ENST00000494546 PLAC8Q9NZF1 115 aa21.04■□□□□ 0.96
CBX4-203ENST00000494546 LOC389332A0A1B0GUA5 103 aa21.03■□□□□ 0.96
CBX4-203ENST00000494546 A0A096LNI7 61 aa21.02■□□□□ 0.96
CBX4-203ENST00000494546 UQCC3Q6UW78 93 aa21.02■□□□□ 0.96
CBX4-203ENST00000494546 LAMTOR2Q9Y2Q5 125 aa21.02■□□□□ 0.96
CBX4-203ENST00000494546 IGLV4-69A0A075B6H9 119 aa21.01■□□□□ 0.95
CBX4-203ENST00000494546 ADCYAP1P18509 176 aa21.01■□□□□ 0.95
CBX4-203ENST00000494546 MRPS36P82909 103 aaKnown RBP21.01■□□□□ 0.95
CBX4-203ENST00000494546 MAP1LC3AQ9H492 121 aa21.01■□□□□ 0.95
CBX4-203ENST00000494546 PKIGQ9Y2B9 76 aa21.01■□□□□ 0.95
CBX4-203ENST00000494546 HNRNPA3P51991 378 aaKnown RBP21■□□□□ 0.95
CBX4-203ENST00000494546 TMEM218A2RU14 115 aa20.99■□□□□ 0.95
CBX4-203ENST00000494546 STPG4Q8N801 248 aa20.99■□□□□ 0.95
CBX4-203ENST00000494546 IFITM10A6NMD0 228 aa20.98■□□□□ 0.95
CBX4-203ENST00000494546 PRSS47A8MTI9 375 aa20.98■□□□□ 0.95
CBX4-203ENST00000494546 APOMO95445 188 aa20.98■□□□□ 0.95
CBX4-203ENST00000494546 IFI27P40305 119 aaPredicted RBP20.97■□□□□ 0.95
CBX4-203ENST00000494546 CAMK2N2Q96S95 79 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms