RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.76□□□□□ -1.49
ITGB1-217ENST00000494395 IGKV2-29A2NJV5 120 aaPredicted RBP5.76□□□□□ -1.49
ITGB1-217ENST00000494395 KRTAP9-7A8MTY7 169 aa5.76□□□□□ -1.49
ITGB1-217ENST00000494395 H7C423 109 aa5.76□□□□□ -1.49
ITGB1-217ENST00000494395 I3L3M4 83 aa5.76□□□□□ -1.49
ITGB1-217ENST00000494395 CDK2AP2O75956 126 aa5.76□□□□□ -1.49
ITGB1-217ENST00000494395 CRPP02741 224 aa5.76□□□□□ -1.49
ITGB1-217ENST00000494395 APCSP02743 223 aa5.76□□□□□ -1.49
ITGB1-217ENST00000494395 S100A8P05109 93 aa5.76□□□□□ -1.49
ITGB1-217ENST00000494395 PMCHP20382 165 aa5.76□□□□□ -1.49
ITGB1-217ENST00000494395 RPL32P62910 135 aaKnown RBP5.76□□□□□ -1.49
ITGB1-217ENST00000494395 CLPSL2Q6UWE3 100 aa5.76□□□□□ -1.49
ITGB1-217ENST00000494395 LINC00269Q8N2A0 174 aa5.76□□□□□ -1.49
ITGB1-217ENST00000494395 NTN5Q8WTR8 489 aaPredicted RBP5.76□□□□□ -1.49
ITGB1-217ENST00000494395 TMEM242Q9NWH2 141 aa5.76□□□□□ -1.49
ITGB1-217ENST00000494395 APOBP04114 4563 aaKnown RBP5.75□□□□□ -1.49
ITGB1-217ENST00000494395 F8W036 122 aa5.75□□□□□ -1.49
ITGB1-217ENST00000494395 LECT2O14960 151 aa5.75□□□□□ -1.49
ITGB1-217ENST00000494395 PPP1R17O96001 155 aa5.75□□□□□ -1.49
ITGB1-217ENST00000494395 PCP4P48539 62 aa5.75□□□□□ -1.49
ITGB1-217ENST00000494395 KRTAP10-1P60331 282 aa5.75□□□□□ -1.49
ITGB1-217ENST00000494395 REG3AQ06141 175 aa5.75□□□□□ -1.49
ITGB1-217ENST00000494395 BAALCQ8WXS3 180 aa5.75□□□□□ -1.49
ITGB1-217ENST00000494395 CARHSP1Q9Y2V2 147 aaKnown RBP5.75□□□□□ -1.49
ITGB1-217ENST00000494395 RYR1P21817 5038 aa5.75□□□□□ -1.49
ITGB1-217ENST00000494395 D6R8Y8 96 aa5.74□□□□□ -1.49
ITGB1-217ENST00000494395 VCYO14598 125 aa5.74□□□□□ -1.49
ITGB1-217ENST00000494395 PHOX2AO14813 284 aa5.74□□□□□ -1.49
ITGB1-217ENST00000494395 UBE2L6O14933 153 aa5.74□□□□□ -1.49
ITGB1-217ENST00000494395 NPYP01303 97 aa5.74□□□□□ -1.49
ITGB1-217ENST00000494395 FGF6P10767 208 aa5.74□□□□□ -1.49
ITGB1-217ENST00000494395 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
ITGB1-217ENST00000494395 MRPL52Q86TS9 123 aaKnown RBP5.74□□□□□ -1.49
ITGB1-217ENST00000494395 BTF3L4Q96K17 158 aa5.74□□□□□ -1.49
ITGB1-217ENST00000494395 IMMP2LQ96T52 175 aa5.74□□□□□ -1.49
ITGB1-217ENST00000494395 C20orf78Q9BR46 151 aa5.74□□□□□ -1.49
ITGB1-217ENST00000494395 IGLV5-52A0A0A0MRZ9 124 aa5.73□□□□□ -1.49
ITGB1-217ENST00000494395 C7orf77A4D0Y5 90 aa5.73□□□□□ -1.49
ITGB1-217ENST00000494395 PPBPP02775 128 aa5.73□□□□□ -1.49
ITGB1-217ENST00000494395 ZNF25P17030 456 aaPredicted RBP5.73□□□□□ -1.49
ITGB1-217ENST00000494395 CKS2P33552 79 aa5.73□□□□□ -1.49
ITGB1-217ENST00000494395 Q8N1X5 172 aa5.73□□□□□ -1.49
ITGB1-217ENST00000494395 SMIM2Q9BVW6 85 aa5.73□□□□□ -1.49
ITGB1-217ENST00000494395 CTDSP1Q9GZU7 261 aa5.73□□□□□ -1.49
ITGB1-217ENST00000494395 IGLV10-54A0A075B6I4 117 aa5.72□□□□□ -1.49
ITGB1-217ENST00000494395 TRAV9-1A0A075B6T8 112 aa5.72□□□□□ -1.49
ITGB1-217ENST00000494395 TRAV8-4A0A0B4J246 113 aa5.72□□□□□ -1.49
ITGB1-217ENST00000494395 PRSS47A8MTI9 375 aa5.72□□□□□ -1.49
ITGB1-217ENST00000494395 USP17L23D6RBM5 183 aa5.72□□□□□ -1.49
ITGB1-217ENST00000494395 XGP55808 180 aa5.72□□□□□ -1.49
ITGB1-217ENST00000494395 TMEM136Q6ZRR5 245 aa5.72□□□□□ -1.49
ITGB1-217ENST00000494395 ORMDL3Q8N138 153 aa5.72□□□□□ -1.49
ITGB1-217ENST00000494395 KIR2DL4Q99706 377 aa5.72□□□□□ -1.49
ITGB1-217ENST00000494395 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.71□□□□□ -1.5
ITGB1-217ENST00000494395 PRYO14603 147 aa5.71□□□□□ -1.5
ITGB1-217ENST00000494395 HLA-DQA1P01909 254 aa5.71□□□□□ -1.5
ITGB1-217ENST00000494395 AMMECR1LQ6DCA0 310 aa5.71□□□□□ -1.5
ITGB1-217ENST00000494395 RNASEKQ6P5S7 137 aaKnown RBP5.71□□□□□ -1.5
ITGB1-217ENST00000494395 Q6ZSA8 131 aa5.71□□□□□ -1.5
ITGB1-217ENST00000494395 OR5A1Q8NGJ0 315 aa5.71□□□□□ -1.5
ITGB1-217ENST00000494395 PRELID3AQ96N28 172 aa5.71□□□□□ -1.5
ITGB1-217ENST00000494395 CDC42SE2Q9NRR3 84 aa5.71□□□□□ -1.5
ITGB1-217ENST00000494395 UBE2D4Q9Y2X8 147 aa5.71□□□□□ -1.5
ITGB1-217ENST00000494395 CSDC2Q9Y534 153 aaKnown RBP5.71□□□□□ -1.5
ITGB1-217ENST00000494395 PRSS1P07477 247 aa5.7□□□□□ -1.5
ITGB1-217ENST00000494395 FCER1GP30273 86 aa5.7□□□□□ -1.5
ITGB1-217ENST00000494395 RHEBQ15382 184 aa5.7□□□□□ -1.5
ITGB1-217ENST00000494395 C14orf177Q52M58 125 aa5.7□□□□□ -1.5
ITGB1-217ENST00000494395 FAM104AQ969W3 186 aa5.7□□□□□ -1.5
ITGB1-217ENST00000494395 TIMM21Q9BVV7 248 aa5.7□□□□□ -1.5
ITGB1-217ENST00000494395 KRTAP4-5Q9BYR2 181 aa5.7□□□□□ -1.5
ITGB1-217ENST00000494395 LAMTOR2Q9Y2Q5 125 aa5.7□□□□□ -1.5
ITGB1-217ENST00000494395 DNAH8Q96JB1 4490 aa5.7□□□□□ -1.5
ITGB1-217ENST00000494395 LINC00959A0A1B0GUT2 108 aa5.69□□□□□ -1.5
ITGB1-217ENST00000494395 TCAPO15273 167 aa5.69□□□□□ -1.5
ITGB1-217ENST00000494395 ZNF664Q8N3J9 261 aa5.69□□□□□ -1.5
ITGB1-217ENST00000494395 CHCHD10Q8WYQ3 142 aaPredicted RBP5.69□□□□□ -1.5
ITGB1-217ENST00000494395 TMEM101Q96IK0 257 aa5.69□□□□□ -1.5
ITGB1-217ENST00000494395 IGKV3OR2-268A0A0C4DH90 116 aa5.68□□□□□ -1.5
ITGB1-217ENST00000494395 RPL39P62891 51 aaKnown RBP5.68□□□□□ -1.5
ITGB1-217ENST00000494395 LINC01620Q4KN68 170 aa5.68□□□□□ -1.5
ITGB1-217ENST00000494395 Q6ZUT4 128 aa5.68□□□□□ -1.5
ITGB1-217ENST00000494395 C15orf56Q8N910 161 aa5.68□□□□□ -1.5
ITGB1-217ENST00000494395 TMEM18Q96B42 140 aa5.67□□□□□ -1.5
ITGB1-217ENST00000494395 MAP1LC3AQ9H492 121 aa5.67□□□□□ -1.5
ITGB1-217ENST00000494395 RPS10P5Q9NQ39 176 aa5.67□□□□□ -1.5
ITGB1-217ENST00000494395 SPANXA1Q9NS26 97 aa5.67□□□□□ -1.5
ITGB1-217ENST00000494395 CCL25O15444 150 aa5.66□□□□□ -1.5
ITGB1-217ENST00000494395 SLPIP03973 132 aa5.66□□□□□ -1.5
ITGB1-217ENST00000494395 S100PP25815 95 aa5.66□□□□□ -1.5
ITGB1-217ENST00000494395 CNBPP62633 177 aaKnown RBP5.66□□□□□ -1.5
ITGB1-217ENST00000494395 HAMPP81172 84 aa5.66□□□□□ -1.5
ITGB1-217ENST00000494395 MRPS36P82909 103 aaKnown RBP5.66□□□□□ -1.5
ITGB1-217ENST00000494395 SMAGPQ0VAQ4 97 aa5.66□□□□□ -1.5
ITGB1-217ENST00000494395 KIAA1644Q3SXP7 199 aa5.66□□□□□ -1.5
ITGB1-217ENST00000494395 RNASE13Q5GAN3 156 aaKnown RBP5.66□□□□□ -1.5
ITGB1-217ENST00000494395 Q8N8P6 123 aa5.66□□□□□ -1.5
ITGB1-217ENST00000494395 C9orf163Q8N9P6 203 aa5.66□□□□□ -1.5
ITGB1-217ENST00000494395 GNB1LQ9BYB4 327 aa5.66□□□□□ -1.5
ITGB1-217ENST00000494395 LOC389332A0A1B0GUA5 103 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms