RNA–Protein interactions for RNA: ENST00000491360.1

ABCB1-208, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 2

Gene ABCB1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-208ENST00000491360 CITED2Q99967 270 aaPredicted RBP3.47□□□□□ -1.85
ABCB1-208ENST00000491360 CHCHD7Q9BUK0 85 aa3.47□□□□□ -1.85
ABCB1-208ENST00000491360 PPDPFQ9H3Y8 114 aa3.47□□□□□ -1.85
ABCB1-208ENST00000491360 PRORYQ9H606 182 aa3.47□□□□□ -1.85
ABCB1-208ENST00000491360 SPTBN1Q01082 2364 aaKnown RBP3.46□□□□□ -1.86
ABCB1-208ENST00000491360 IGHV3OR16-10A0A075B7F0 116 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 ATOX1O00244 68 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 IGKV3-20P01619 116 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 BAALC-AS2P0C853 105 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 EDN2P20800 178 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 HERVK_113P63121 156 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 ADORA2A-AS1P86434 159 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 ZNF415Q09FC8 603 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 DAZ2Q13117 558 aaKnown RBP3.46□□□□□ -1.86
ABCB1-208ENST00000491360 LY6EQ16553 131 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 SPINK13Q1W4C9 94 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 C5orf47Q569G3 176 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 RNASE13Q5GAN3 156 aaKnown RBP3.46□□□□□ -1.86
ABCB1-208ENST00000491360 CEMP1Q6PRD7 247 aaPredicted RBP3.46□□□□□ -1.86
ABCB1-208ENST00000491360 DAZ4Q86SG3 579 aaKnown RBP3.46□□□□□ -1.86
ABCB1-208ENST00000491360 C3orf56Q8N813 242 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 OVOL2Q9BRP0 275 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 BPESC1Q9GZL8 116 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 UBTD1Q9HAC8 227 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 DAZ3Q9NR90 486 aaKnown RBP3.46□□□□□ -1.86
ABCB1-208ENST00000491360 CSDC2Q9Y534 153 aaKnown RBP3.46□□□□□ -1.86
ABCB1-208ENST00000491360 PIEZO2Q9H5I5 2752 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 ABCA2Q9BZC7 2435 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 ANKHD1Q8IWZ3 2542 aaKnown RBP3.46□□□□□ -1.86
ABCB1-208ENST00000491360 CACNA1HO95180 2353 aa3.46□□□□□ -1.86
ABCB1-208ENST00000491360 COL6A6A6NMZ7 2263 aa3.45□□□□□ -1.86
ABCB1-208ENST00000491360 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.45□□□□□ -1.86
ABCB1-208ENST00000491360 IGHV3-73A0A0B4J1V6 119 aa3.45□□□□□ -1.86
ABCB1-208ENST00000491360 TRAV13-2A0A0B4J235 113 aa3.45□□□□□ -1.86
ABCB1-208ENST00000491360 IGLV5-39A0A0G2JS06 123 aa3.45□□□□□ -1.86
ABCB1-208ENST00000491360 IGKV2-29A2NJV5 120 aaPredicted RBP3.45□□□□□ -1.86
ABCB1-208ENST00000491360 A8MZ25 164 aa3.45□□□□□ -1.86
ABCB1-208ENST00000491360 H3BUX3 64 aa3.45□□□□□ -1.86
ABCB1-208ENST00000491360 CRYGAP11844 174 aa3.45□□□□□ -1.86
ABCB1-208ENST00000491360 HIST1H4AP62805 103 aaKnown RBP3.45□□□□□ -1.86
ABCB1-208ENST00000491360 RPS28P62857 69 aaKnown RBP3.45□□□□□ -1.86
ABCB1-208ENST00000491360 CFHR3Q02985 330 aa3.45□□□□□ -1.86
ABCB1-208ENST00000491360 C10orf25Q5T742 122 aa3.45□□□□□ -1.86
ABCB1-208ENST00000491360 GAGE2AQ6NT46 116 aa3.45□□□□□ -1.86
ABCB1-208ENST00000491360 FAM19A3Q7Z5A8 133 aa3.45□□□□□ -1.86
ABCB1-208ENST00000491360 LINC00467Q9BRT7 94 aa3.45□□□□□ -1.86
ABCB1-208ENST00000491360 Q9H8V8 135 aa3.45□□□□□ -1.86
ABCB1-208ENST00000491360 CDKN2A-AS1Q9UH64 79 aa3.45□□□□□ -1.86
ABCB1-208ENST00000491360 DMXL2Q8TDJ6 3036 aa3.44□□□□□ -1.86
ABCB1-208ENST00000491360 TMEM89A2RUT3 159 aa3.44□□□□□ -1.86
ABCB1-208ENST00000491360 SMIM9A6NGZ8 99 aa3.44□□□□□ -1.86
ABCB1-208ENST00000491360 A8MTW9 85 aa3.44□□□□□ -1.86
ABCB1-208ENST00000491360 K7ENP7 123 aa3.44□□□□□ -1.86
ABCB1-208ENST00000491360 IGHV3-53P01767 116 aa3.44□□□□□ -1.86
ABCB1-208ENST00000491360 MALP21145 153 aa3.44□□□□□ -1.86
ABCB1-208ENST00000491360 DGAT2L7PQ6IED9 249 aa3.44□□□□□ -1.86
ABCB1-208ENST00000491360 Q6JHZ5 121 aa3.44□□□□□ -1.86
ABCB1-208ENST00000491360 BRD3OSQ6XYD6 125 aa3.44□□□□□ -1.86
ABCB1-208ENST00000491360 OR13C6PQ8NH95 151 aa3.44□□□□□ -1.86
ABCB1-208ENST00000491360 C2orf48Q96LS8 159 aa3.44□□□□□ -1.86
ABCB1-208ENST00000491360 MAP1BP46821 2468 aaKnown RBP3.44□□□□□ -1.86
ABCB1-208ENST00000491360 SORL1Q92673 2214 aa3.43□□□□□ -1.86
ABCB1-208ENST00000491360 A0A1W2PPR1 153 aa3.43□□□□□ -1.86
ABCB1-208ENST00000491360 KNCNA6PVL3 124 aa3.43□□□□□ -1.86
ABCB1-208ENST00000491360 RS1O15537 224 aa3.43□□□□□ -1.86
ABCB1-208ENST00000491360 DNAL4O96015 105 aa3.43□□□□□ -1.86
ABCB1-208ENST00000491360 CRPP02741 224 aa3.43□□□□□ -1.86
ABCB1-208ENST00000491360 RBMY1A1P0DJD3 496 aaKnown RBP3.43□□□□□ -1.86
ABCB1-208ENST00000491360 RBMY1CP0DJD4 496 aa3.43□□□□□ -1.86
ABCB1-208ENST00000491360 RPL28P46779 137 aaKnown RBP3.43□□□□□ -1.86
ABCB1-208ENST00000491360 COX6A2Q02221 97 aa3.43□□□□□ -1.86
ABCB1-208ENST00000491360 RPL18AQ02543 176 aaKnown RBP3.43□□□□□ -1.86
ABCB1-208ENST00000491360 RBMY1FQ15415 496 aaKnown RBP3.43□□□□□ -1.86
ABCB1-208ENST00000491360 SOSTDC1Q6X4U4 206 aa3.43□□□□□ -1.86
ABCB1-208ENST00000491360 PIMREGQ9BSJ6 248 aa3.43□□□□□ -1.86
ABCB1-208ENST00000491360 C22orf24Q9Y442 160 aa3.43□□□□□ -1.86
ABCB1-208ENST00000491360 IGHV3OR16-12A0A075B7B8 117 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 IGHV3-38A0A0C4DH36 116 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 LOC107984640A0A0U1RRK4 108 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 SMIM1B2RUZ4 78 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 H0YGX0 51 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 IGHV4-38-2P0DP08 117 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 PSMB8P28062 276 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 TMEM258P61165 79 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 BLCAPP62952 87 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 KLRB1Q12918 225 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 LINC00242Q5T6M2 205 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 HIST2H2BCQ6DN03 193 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 HIST2H2BDQ6DRA6 164 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 FAM19A5Q7Z5A7 132 aaPredicted RBP3.42□□□□□ -1.86
ABCB1-208ENST00000491360 Q8N2B8 174 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 SERP2Q8N6R1 65 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 ZNF625Q96I27 306 aaPredicted RBP3.42□□□□□ -1.86
ABCB1-208ENST00000491360 FAM218AQ96MZ4 157 aa3.42□□□□□ -1.86
ABCB1-208ENST00000491360 KLK5Q9Y337 293 aaPredicted RBP3.42□□□□□ -1.86
ABCB1-208ENST00000491360 LOC400499M0QZD8 3231 aa3.41□□□□□ -1.86
ABCB1-208ENST00000491360 PTPRZ1P23471 2315 aaPredicted RBP3.41□□□□□ -1.86
ABCB1-208ENST00000491360 TRAV13-1A0A0B4J241 112 aa3.41□□□□□ -1.86
ABCB1-208ENST00000491360 A0A0U1RRA0 63 aa3.41□□□□□ -1.86
ABCB1-208ENST00000491360 hADV29S1A0JD25 119 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms