RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 RBMY1A1P0DJD3 496 aaKnown RBP16.36■□□□□ 0.21
USF3-203ENST00000491165 RBMY1CP0DJD4 496 aa16.36■□□□□ 0.21
USF3-203ENST00000491165 RBMY1FQ15415 496 aaKnown RBP16.36■□□□□ 0.21
USF3-203ENST00000491165 CFAP126Q5VTH2 177 aa16.36■□□□□ 0.21
USF3-203ENST00000491165 PSMB2P49721 201 aa16.36■□□□□ 0.21
USF3-203ENST00000491165 SIGMAR1Q99720 223 aa16.36■□□□□ 0.21
USF3-203ENST00000491165 K7EIL1 84 aa16.35■□□□□ 0.21
USF3-203ENST00000491165 SFTA2Q6UW10 78 aa16.35■□□□□ 0.21
USF3-203ENST00000491165 XCL2Q9UBD3 114 aa16.35■□□□□ 0.21
USF3-203ENST00000491165 CFC1BP0CG36 223 aa16.34■□□□□ 0.21
USF3-203ENST00000491165 CFC1P0CG37 223 aa16.34■□□□□ 0.21
USF3-203ENST00000491165 VCX2Q9H322 139 aa16.34■□□□□ 0.21
USF3-203ENST00000491165 IGLV4-3A0A075B6K6 122 aa16.33■□□□□ 0.21
USF3-203ENST00000491165 RHODO00212 210 aa16.33■□□□□ 0.21
USF3-203ENST00000491165 ZNF22P17026 224 aaPredicted RBP16.33■□□□□ 0.21
USF3-203ENST00000491165 SPATA25Q9BR10 227 aa16.33■□□□□ 0.21
USF3-203ENST00000491165 GTSF1LQ9H1H1 148 aa16.33■□□□□ 0.21
USF3-203ENST00000491165 EDA2RQ9HAV5 297 aa16.33■□□□□ 0.21
USF3-203ENST00000491165 AZU1P20160 251 aa16.33■□□□□ 0.2
USF3-203ENST00000491165 PRKDCP78527 4128 aaKnown RBP16.32■□□□□ 0.2
USF3-203ENST00000491165 C10orf126Q8N4M7 172 aa16.32■□□□□ 0.2
USF3-203ENST00000491165 ATP6V0E2Q8NHE4 81 aa16.32■□□□□ 0.2
USF3-203ENST00000491165 C1QTNF4Q9BXJ3 329 aa16.32■□□□□ 0.2
USF3-203ENST00000491165 SMCPP49901 116 aaPredicted RBP16.31■□□□□ 0.2
USF3-203ENST00000491165 HTN1P15515 57 aa16.31■□□□□ 0.2
USF3-203ENST00000491165 A0A0J9YXV3 536 aa16.3■□□□□ 0.2
USF3-203ENST00000491165 PRM2P04554 102 aa16.3■□□□□ 0.2
USF3-203ENST00000491165 PRO1854Q9UHT4 67 aa16.3■□□□□ 0.2
USF3-203ENST00000491165 CSNK1G2-AS1Q8NCQ2 148 aa16.3■□□□□ 0.2
USF3-203ENST00000491165 TRBV20-1A0A075B6N2 111 aa16.29■□□□□ 0.2
USF3-203ENST00000491165 IGHV3-73A0A0B4J1V6 119 aa16.29■□□□□ 0.2
USF3-203ENST00000491165 A8MZ25 164 aa16.29■□□□□ 0.2
USF3-203ENST00000491165 SCGB1A1P11684 91 aa16.29■□□□□ 0.2
USF3-203ENST00000491165 PYGO1Q9Y3Y4 419 aa16.29■□□□□ 0.2
USF3-203ENST00000491165 IGHV3-64A0A075B6Q5 118 aa16.28■□□□□ 0.2
USF3-203ENST00000491165 FOXI1Q12951 378 aa16.28■□□□□ 0.2
USF3-203ENST00000491165 C1orf158Q8N1D5 194 aa16.28■□□□□ 0.2
USF3-203ENST00000491165 TCL1BO95988 128 aa16.27■□□□□ 0.2
USF3-203ENST00000491165 SMAGPQ0VAQ4 97 aa16.27■□□□□ 0.19
USF3-203ENST00000491165 A4D1N5 150 aa16.26■□□□□ 0.19
USF3-203ENST00000491165 A8MWV9 139 aa16.26■□□□□ 0.19
USF3-203ENST00000491165 TNFRSF18Q9Y5U5 241 aa16.26■□□□□ 0.19
USF3-203ENST00000491165 COL7A1Q02388 2944 aa16.26■□□□□ 0.19
USF3-203ENST00000491165 TENM3Q9P273 2699 aa16.26■□□□□ 0.19
USF3-203ENST00000491165 M0R2P5 195 aa16.25■□□□□ 0.19
USF3-203ENST00000491165 CRYBA4P53673 196 aa16.25■□□□□ 0.19
USF3-203ENST00000491165 DNAH9Q9NYC9 4486 aa16.24■□□□□ 0.19
USF3-203ENST00000491165 HUWE1Q7Z6Z7 4374 aaKnown RBP16.24■□□□□ 0.19
USF3-203ENST00000491165 INSP01308 110 aa16.24■□□□□ 0.19
USF3-203ENST00000491165 SCGB1C2P0DMR2 95 aa16.24■□□□□ 0.19
USF3-203ENST00000491165 KIR2DL5BQ8NHK3 375 aa16.24■□□□□ 0.19
USF3-203ENST00000491165 IGHV3OR16-12A0A075B7B8 117 aa16.24■□□□□ 0.19
USF3-203ENST00000491165 ZNF415Q09FC8 603 aa16.24■□□□□ 0.19
USF3-203ENST00000491165 DEFB135Q30KP9 77 aa16.24■□□□□ 0.19
USF3-203ENST00000491165 PIK3CD-AS1Q5SR53 167 aa16.24■□□□□ 0.19
USF3-203ENST00000491165 MRPS36P82909 103 aaKnown RBP16.23■□□□□ 0.19
USF3-203ENST00000491165 DEFB121Q5J5C9 76 aa16.23■□□□□ 0.19
USF3-203ENST00000491165 APOC4P55056 127 aa16.22■□□□□ 0.19
USF3-203ENST00000491165 FAM104AQ969W3 186 aa16.22■□□□□ 0.19
USF3-203ENST00000491165 TIMM21Q9BVV7 248 aa16.22■□□□□ 0.19
USF3-203ENST00000491165 A0A0B4J2C4 111 aa16.22■□□□□ 0.19
USF3-203ENST00000491165 MUSTN1Q8IVN3 82 aa16.22■□□□□ 0.19
USF3-203ENST00000491165 TMEM263Q8WUH6 116 aaKnown RBP16.22■□□□□ 0.19
USF3-203ENST00000491165 SPXQ9BT56 116 aa16.22■□□□□ 0.19
USF3-203ENST00000491165 IGHV3-30-3P0DP02 117 aa16.21■□□□□ 0.19
USF3-203ENST00000491165 A0A0J9YXY3 114 aa16.21■□□□□ 0.18
USF3-203ENST00000491165 TEN1Q86WV5 123 aa16.21■□□□□ 0.18
USF3-203ENST00000491165 SBSPONQ8IVN8 264 aa16.21■□□□□ 0.18
USF3-203ENST00000491165 IGHV3-33P01772 117 aa16.2■□□□□ 0.18
USF3-203ENST00000491165 CEMP1Q6PRD7 247 aaPredicted RBP16.2■□□□□ 0.18
USF3-203ENST00000491165 PTH2Q96A98 100 aa16.2■□□□□ 0.18
USF3-203ENST00000491165 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.19■□□□□ 0.18
USF3-203ENST00000491165 EIF4EBP3O60516 100 aaPredicted RBP16.19■□□□□ 0.18
USF3-203ENST00000491165 PPDPFLQ8WWR9 84 aa16.19■□□□□ 0.18
USF3-203ENST00000491165 LINC01587Q99440 93 aa16.19■□□□□ 0.18
USF3-203ENST00000491165 ERG28Q9UKR5 140 aa16.19■□□□□ 0.18
USF3-203ENST00000491165 MRAPQ8TCY5 172 aa16.18■□□□□ 0.18
USF3-203ENST00000491165 RETNQ9HD89 108 aa16.18■□□□□ 0.18
USF3-203ENST00000491165 SPANXA1Q9NS26 97 aa16.18■□□□□ 0.18
USF3-203ENST00000491165 Q6ZSN1 163 aa16.18■□□□□ 0.18
USF3-203ENST00000491165 CHCHD7Q9BUK0 85 aa16.18■□□□□ 0.18
USF3-203ENST00000491165 NACAE9PAV3 2078 aa16.17■□□□□ 0.18
USF3-203ENST00000491165 IGHV1-58A0A0C4DH39 117 aa16.16■□□□□ 0.18
USF3-203ENST00000491165 RNASE13Q5GAN3 156 aaKnown RBP16.16■□□□□ 0.18
USF3-203ENST00000491165 Q9UF83 564 aa16.16■□□□□ 0.18
USF3-203ENST00000491165 UBE2D4Q9Y2X8 147 aa16.16■□□□□ 0.18
USF3-203ENST00000491165 X6R8D5 127 aa16.16■□□□□ 0.18
USF3-203ENST00000491165 TRAV8-3A0A0A6YYJ7 113 aa16.15■□□□□ 0.18
USF3-203ENST00000491165 TINCRA0A1B0GVN0 87 aa16.15■□□□□ 0.18
USF3-203ENST00000491165 LINC00467Q9BRT7 94 aa16.15■□□□□ 0.18
USF3-203ENST00000491165 H7C2G1 150 aa16.15■□□□□ 0.18
USF3-203ENST00000491165 C11orf72Q8NBR9 251 aa16.15■□□□□ 0.18
USF3-203ENST00000491165 CARD19Q96LW7 228 aa16.15■□□□□ 0.18
USF3-203ENST00000491165 RNF183Q96D59 192 aa16.14■□□□□ 0.17
USF3-203ENST00000491165 DNAJC30Q96LL9 226 aa16.14■□□□□ 0.17
USF3-203ENST00000491165 LITAFQ99732 161 aa16.14■□□□□ 0.17
USF3-203ENST00000491165 IGHV3-53P01767 116 aa16.13■□□□□ 0.17
USF3-203ENST00000491165 CDIP1Q9H305 208 aa16.13■□□□□ 0.17
USF3-203ENST00000491165 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.13■□□□□ 0.17
USF3-203ENST00000491165 IGKV2-29A2NJV5 120 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms