RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 IDO2Q6ZQW0 420 aa2.03□□□□□ -2.08
SSX2IP-208ENST00000490476 KTN1-AS1Q86SY8 53 aa2.03□□□□□ -2.08
SSX2IP-208ENST00000490476 Q8NDZ9 215 aa2.03□□□□□ -2.08
SSX2IP-208ENST00000490476 RSL24D1Q9UHA3 163 aaKnown RBP2.03□□□□□ -2.08
SSX2IP-208ENST00000490476 A0A1B0GV72 72 aa2.02□□□□□ -2.09
SSX2IP-208ENST00000490476 A6NN06 94 aa2.02□□□□□ -2.09
SSX2IP-208ENST00000490476 PGLYRP1O75594 196 aaPredicted RBP2.02□□□□□ -2.09
SSX2IP-208ENST00000490476 CRYZL1O95825 349 aa2.02□□□□□ -2.09
SSX2IP-208ENST00000490476 HTN1P15515 57 aa2.02□□□□□ -2.09
SSX2IP-208ENST00000490476 ETV6P41212 452 aa2.02□□□□□ -2.09
SSX2IP-208ENST00000490476 EIF2B2P49770 351 aaKnown RBP2.02□□□□□ -2.09
SSX2IP-208ENST00000490476 VMA21Q3ZAQ7 101 aa2.02□□□□□ -2.09
SSX2IP-208ENST00000490476 PXT1Q8NFP0 134 aa2.02□□□□□ -2.09
SSX2IP-208ENST00000490476 MRPL30Q8TCC3 161 aaKnown RBP2.02□□□□□ -2.09
SSX2IP-208ENST00000490476 TMEM263Q8WUH6 116 aaKnown RBP2.02□□□□□ -2.09
SSX2IP-208ENST00000490476 HOPXQ9BPY8 73 aaPredicted RBP2.02□□□□□ -2.09
SSX2IP-208ENST00000490476 COMMD5Q9GZQ3 224 aa2.02□□□□□ -2.09
SSX2IP-208ENST00000490476 PRO0255Q9UI72 69 aa2.02□□□□□ -2.09
SSX2IP-208ENST00000490476 JPT1Q9UK76 154 aa2.02□□□□□ -2.09
SSX2IP-208ENST00000490476 TRGV2A0A075B6R0 118 aa2.01□□□□□ -2.09
SSX2IP-208ENST00000490476 FAM236DA0A1B0GTK5 79 aa2.01□□□□□ -2.09
SSX2IP-208ENST00000490476 HMSDA8MTL9 139 aa2.01□□□□□ -2.09
SSX2IP-208ENST00000490476 AIPO00170 330 aa2.01□□□□□ -2.09
SSX2IP-208ENST00000490476 NBEAP1P0C6P0 100 aa2.01□□□□□ -2.09
SSX2IP-208ENST00000490476 FAM236CP0DP71 79 aa2.01□□□□□ -2.09
SSX2IP-208ENST00000490476 CRYBA4P53673 196 aa2.01□□□□□ -2.09
SSX2IP-208ENST00000490476 RPS20P60866 119 aaKnown RBP2.01□□□□□ -2.09
SSX2IP-208ENST00000490476 AADACL3Q5VUY0 350 aa2.01□□□□□ -2.09
SSX2IP-208ENST00000490476 LPCAT3Q6P1A2 487 aa2.01□□□□□ -2.09
SSX2IP-208ENST00000490476 FOXI2Q6ZQN5 318 aa2.01□□□□□ -2.09
SSX2IP-208ENST00000490476 BORCS5Q969J3 196 aa2.01□□□□□ -2.09
SSX2IP-208ENST00000490476 DOK5Q9P104 306 aa2.01□□□□□ -2.09
SSX2IP-208ENST00000490476 PRELID3BQ9Y3B1 194 aa2.01□□□□□ -2.09
SSX2IP-208ENST00000490476 YPEL1O60688 119 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 HIST1H2BOP23527 126 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 HIST1H2BBP33778 126 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 RBP2P50120 134 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 HIST1H2BDP58876 126 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 KRTAP12-1P59990 96 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 HIST1H4AP62805 103 aaKnown RBP2□□□□□ -2.09
SSX2IP-208ENST00000490476 HIST1H2BCP62807 126 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 EMX2Q04743 252 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 HIST2H2BEQ16778 126 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 Q56UQ5 140 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 PCOTHQ58A44 107 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 HIST2H2BFQ5QNW6 126 aaPredicted RBP2□□□□□ -2.09
SSX2IP-208ENST00000490476 FP248Q71RG6 208 aaPredicted RBP2□□□□□ -2.09
SSX2IP-208ENST00000490476 HIST1H2BHQ93079 126 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 YPEL2Q96QA6 119 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 HIST1H2BNQ99877 126 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 HIST1H2BMQ99879 126 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 CMSS1Q9BQ75 279 aaKnown RBP2□□□□□ -2.09
SSX2IP-208ENST00000490476 TMEM147Q9BVK8 224 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 V9GYS6 101 aa2□□□□□ -2.09
SSX2IP-208ENST00000490476 FABP5P3A8MUU1 101 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 M0R2Z0 102 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 IFNA7P01567 189 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 TTRP02766 147 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 TRGC1P0CF51 173 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 AQP4P55087 323 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 FXYD6P3P58550 94 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 CCL20P78556 96 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 CDK10Q15131 360 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 SPINK13Q1W4C9 94 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 C1orf137Q5JT78 98 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 STX19Q8N4C7 294 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 MCFD2Q8NI22 146 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 TSC22D3Q99576 134 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 DCSTAMPQ9H295 470 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 TP73-AS1Q9UF72 201 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 TRAPPC2LQ9UL33 140 aa1.99□□□□□ -2.09
SSX2IP-208ENST00000490476 E7EUB6 86 aa1.98□□□□□ -2.09
SSX2IP-208ENST00000490476 TSTD3H0UI37 97 aa1.98□□□□□ -2.09
SSX2IP-208ENST00000490476 ARPC5O15511 151 aa1.98□□□□□ -2.09
SSX2IP-208ENST00000490476 MT-ND6P03923 174 aa1.98□□□□□ -2.09
SSX2IP-208ENST00000490476 SCGB1A1P11684 91 aa1.98□□□□□ -2.09
SSX2IP-208ENST00000490476 PRCDQ00LT1 54 aa1.98□□□□□ -2.09
SSX2IP-208ENST00000490476 TOMM20LQ6UXN7 152 aa1.98□□□□□ -2.09
SSX2IP-208ENST00000490476 BPIFA4PQ86YQ2 179 aa1.98□□□□□ -2.09
SSX2IP-208ENST00000490476 OR4K15Q8NH41 348 aa1.98□□□□□ -2.09
SSX2IP-208ENST00000490476 DERL1Q9BUN8 251 aa1.98□□□□□ -2.09
SSX2IP-208ENST00000490476 TAF9BQ9HBM6 251 aa1.98□□□□□ -2.09
SSX2IP-208ENST00000490476 ARMC1Q9NVT9 282 aa1.98□□□□□ -2.09
SSX2IP-208ENST00000490476 TRAV9-1A0A075B6T8 112 aa1.97□□□□□ -2.09
SSX2IP-208ENST00000490476 IRGMA1A4Y4 181 aa1.97□□□□□ -2.09
SSX2IP-208ENST00000490476 IGKV1-5P01602 117 aa1.97□□□□□ -2.09
SSX2IP-208ENST00000490476 SAA1P0DJI8 122 aaPredicted RBP1.97□□□□□ -2.09
SSX2IP-208ENST00000490476 MT4P47944 62 aa1.97□□□□□ -2.09
SSX2IP-208ENST00000490476 RPL22L1Q6P5R6 122 aaKnown RBP1.97□□□□□ -2.09
SSX2IP-208ENST00000490476 DNAJC9Q8WXX5 260 aa1.97□□□□□ -2.09
SSX2IP-208ENST00000490476 BORCS7Q96B45 105 aa1.97□□□□□ -2.09
SSX2IP-208ENST00000490476 BTF3L4Q96K17 158 aa1.97□□□□□ -2.09
SSX2IP-208ENST00000490476 C2orf50Q96LR7 162 aa1.97□□□□□ -2.09
SSX2IP-208ENST00000490476 LINC00052Q96N35 136 aa1.97□□□□□ -2.09
SSX2IP-208ENST00000490476 SIGMAR1Q99720 223 aa1.97□□□□□ -2.09
SSX2IP-208ENST00000490476 TMEM56-RWDD3S4R434 201 aa1.97□□□□□ -2.09
SSX2IP-208ENST00000490476 TRAV12-2A0A075B6T6 113 aa1.96□□□□□ -2.1
SSX2IP-208ENST00000490476 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.96□□□□□ -2.1
SSX2IP-208ENST00000490476 A8MTW9 85 aa1.96□□□□□ -2.1
SSX2IP-208ENST00000490476 F8W036 122 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms