RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 LYRM7Q5U5X0 104 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 ZFAND6Q6FIF0 208 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 SCGB1D4Q6XE38 83 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 NFE4Q86UQ8 179 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 C20orf203Q8NBC4 194 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 LINC01006Q8NI28 216 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 RAB37Q96AX2 223 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 PLEKHB2Q96CS7 222 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 DUX3Q96PT4 197 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 PRADC1Q9BSG0 188 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 VCX2Q9H322 139 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 SPANXB1Q9NS25 103 aaPredicted RBP3.69□□□□□ -1.82
PTPRK-213ENST00000490332 TP73-AS1Q9UF72 201 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 AGRNO00468 2067 aa3.68□□□□□ -1.82
PTPRK-213ENST00000490332 TRBV7-3A0A075B6L6 115 aa3.68□□□□□ -1.82
PTPRK-213ENST00000490332 TRAV12-2A0A075B6T6 113 aa3.68□□□□□ -1.82
PTPRK-213ENST00000490332 ZNF815PA8K554 130 aa3.68□□□□□ -1.82
PTPRK-213ENST00000490332 IGLL5B9A064 214 aa3.68□□□□□ -1.82
PTPRK-213ENST00000490332 LEPROTO15243 131 aa3.68□□□□□ -1.82
PTPRK-213ENST00000490332 IGKV3-20P01619 116 aa3.68□□□□□ -1.82
PTPRK-213ENST00000490332 LGALS3P17931 250 aaKnown RBP3.68□□□□□ -1.82
PTPRK-213ENST00000490332 FXYD2P54710 66 aa3.68□□□□□ -1.82
PTPRK-213ENST00000490332 TCTAP57738 103 aa3.68□□□□□ -1.82
PTPRK-213ENST00000490332 FAM74A4Q5TZK3 123 aa3.68□□□□□ -1.82
PTPRK-213ENST00000490332 C10orf99Q6UWK7 81 aa3.68□□□□□ -1.82
PTPRK-213ENST00000490332 LINC00482Q8N8I6 264 aa3.68□□□□□ -1.82
PTPRK-213ENST00000490332 PHLDA1Q8WV24 401 aaPredicted RBP3.68□□□□□ -1.82
PTPRK-213ENST00000490332 LINC01587Q99440 93 aa3.68□□□□□ -1.82
PTPRK-213ENST00000490332 JPT2Q9H910 190 aa3.68□□□□□ -1.82
PTPRK-213ENST00000490332 NHP2Q9NX24 153 aaKnown RBP3.68□□□□□ -1.82
PTPRK-213ENST00000490332 IGLV4-69A0A075B6H9 119 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 KNCNA6PVL3 124 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 RS1O15537 224 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 SPRY2O43597 315 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 TSHBP01222 138 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 EDN2P20800 178 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 RBX1P62877 108 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 FHL2Q14192 279 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 RRN3P1Q2M238 152 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 CD300EQ496F6 205 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-213ENST00000490332 TMEM170BQ5T4T1 132 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 SLC25A29Q8N8R3 303 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 KLHL30-AS1Q8NEE0 82 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 RNASE8Q8TDE3 154 aaKnown RBP3.67□□□□□ -1.82
PTPRK-213ENST00000490332 DLX4Q92988 240 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-213ENST00000490332 ZNF479Q96JC4 524 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 FAM110AQ9BQ89 295 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 C16orf95Q9H693 158 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 MAP6D1Q9H9H5 199 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 SPANXA1Q9NS26 97 aa3.67□□□□□ -1.82
PTPRK-213ENST00000490332 SORL1Q92673 2214 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 TRBV20-1A0A075B6N2 111 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 A0A0J9YY99 117 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 TMEM223A0PJW6 202 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 J3QQQ9 107 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 IGHV3-53P01767 116 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 P0DMU3 169 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 FAM231AP0DMU4 169 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 FAM231CP0DMU5 169 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 KHDC1LQ5JSQ8 128 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 MORN3Q6PF18 240 aaPredicted RBP3.66□□□□□ -1.82
PTPRK-213ENST00000490332 Q6ZSV7 163 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 NEGR1Q7Z3B1 354 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 STHQ8IWL8 128 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 TMEM61Q8N0U2 210 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 AMELXQ99217 191 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 VPS25Q9BRG1 176 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 TIMM21Q9BVV7 248 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 TTTY13Q9BZ97 58 aa3.66□□□□□ -1.82
PTPRK-213ENST00000490332 TSSC4Q9Y5U2 329 aaPredicted RBP3.66□□□□□ -1.82
PTPRK-213ENST00000490332 IGLV4-3A0A075B6K6 122 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.65□□□□□ -1.83
PTPRK-213ENST00000490332 TRBV10-1A0A0K0K1A3 114 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 TINCRA0A1B0GVN0 87 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 TMEM238C9JI98 176 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 CCL24O00175 119 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 UBE2D1P51668 147 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 TIRAPP58753 221 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 RPL39P62891 51 aaKnown RBP3.65□□□□□ -1.83
PTPRK-213ENST00000490332 MRPS36P82909 103 aaKnown RBP3.65□□□□□ -1.83
PTPRK-213ENST00000490332 RPL24P83731 157 aaKnown RBP3.65□□□□□ -1.83
PTPRK-213ENST00000490332 EGFEM1PQ0D2K5 195 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 FHL3Q13643 280 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 COTL1Q14019 142 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 RNF151Q2KHN1 245 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 GAGE13Q4V321 117 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 CFAP126Q5VTH2 177 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 WFDC9Q8NEX5 89 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 ZNRF2Q8NHG8 242 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 COPS9Q8WXC6 57 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 RNF183Q96D59 192 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 C1QTNF4Q9BXJ3 329 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 SELENOKQ9Y6D0 94 aa3.65□□□□□ -1.83
PTPRK-213ENST00000490332 DYNC1H1Q14204 4646 aaKnown RBP3.64□□□□□ -1.83
PTPRK-213ENST00000490332 DNAH11Q96DT5 4516 aa3.64□□□□□ -1.83
PTPRK-213ENST00000490332 H7C423 109 aa3.64□□□□□ -1.83
PTPRK-213ENST00000490332 PF4P02776 101 aa3.64□□□□□ -1.83
PTPRK-213ENST00000490332 CD28P10747 220 aa3.64□□□□□ -1.83
PTPRK-213ENST00000490332 HTN1P15515 57 aa3.64□□□□□ -1.83
PTPRK-213ENST00000490332 RPL36AP83881 106 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms