RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 LINC01620Q4KN68 170 aa15.61■□□□□ 0.09
PTPN18-213ENST00000489215 TMEM18Q96B42 140 aa15.61■□□□□ 0.09
PTPN18-213ENST00000489215 UQCC3Q6UW78 93 aa15.6■□□□□ 0.09
PTPN18-213ENST00000489215 C9orf163Q8N9P6 203 aa15.6■□□□□ 0.09
PTPN18-213ENST00000489215 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.59■□□□□ 0.09
PTPN18-213ENST00000489215 hDV102S1A0JD36 115 aa15.59■□□□□ 0.09
PTPN18-213ENST00000489215 GAGE12HA6NDE8 117 aa15.59■□□□□ 0.09
PTPN18-213ENST00000489215 PHOX2AO14813 284 aa15.59■□□□□ 0.09
PTPN18-213ENST00000489215 CHCHD10Q8WYQ3 142 aaPredicted RBP15.59■□□□□ 0.09
PTPN18-213ENST00000489215 CSDC2Q9Y534 153 aaKnown RBP15.59■□□□□ 0.09
PTPN18-213ENST00000489215 CNBPP62633 177 aaKnown RBP15.58■□□□□ 0.08
PTPN18-213ENST00000489215 CHAC1Q9BUX1 264 aa15.58■□□□□ 0.08
PTPN18-213ENST00000489215 TNFRSF6BO95407 300 aa15.57■□□□□ 0.08
PTPN18-213ENST00000489215 HAMPP81172 84 aa15.57■□□□□ 0.08
PTPN18-213ENST00000489215 CDC42SE2Q9NRR3 84 aa15.57■□□□□ 0.08
PTPN18-213ENST00000489215 CCL25O15444 150 aa15.56■□□□□ 0.08
PTPN18-213ENST00000489215 SS18Q15532 418 aa15.56■□□□□ 0.08
PTPN18-213ENST00000489215 ZNF664Q8N3J9 261 aa15.56■□□□□ 0.08
PTPN18-213ENST00000489215 D6R8Y8 96 aa15.55■□□□□ 0.08
PTPN18-213ENST00000489215 LINC00959A0A1B0GUT2 108 aa15.54■□□□□ 0.08
PTPN18-213ENST00000489215 PLA2G1BP04054 148 aaKnown RBP15.54■□□□□ 0.08
PTPN18-213ENST00000489215 INAFM2P0DMQ5 153 aa15.54■□□□□ 0.08
PTPN18-213ENST00000489215 ORMDL3Q8N138 153 aa15.54■□□□□ 0.08
PTPN18-213ENST00000489215 SCXQ7RTU7 201 aa15.53■□□□□ 0.08
PTPN18-213ENST00000489215 TIMM21Q9BVV7 248 aa15.53■□□□□ 0.08
PTPN18-213ENST00000489215 SMIM2Q9BVW6 85 aa15.52■□□□□ 0.08
PTPN18-213ENST00000489215 IFITM2Q01629 132 aa15.51■□□□□ 0.07
PTPN18-213ENST00000489215 TMEM136Q6ZRR5 245 aa15.51■□□□□ 0.07
PTPN18-213ENST00000489215 IMMP2LQ96T52 175 aa15.51■□□□□ 0.07
PTPN18-213ENST00000489215 LAMTOR2Q9Y2Q5 125 aa15.51■□□□□ 0.07
PTPN18-213ENST00000489215 UBE2D4Q9Y2X8 147 aa15.51■□□□□ 0.07
PTPN18-213ENST00000489215 IGHV3-64A0A075B6Q5 118 aa15.5■□□□□ 0.07
PTPN18-213ENST00000489215 C1orf196B1AJZ1 125 aa15.5■□□□□ 0.07
PTPN18-213ENST00000489215 CIRBP-AS1Q8TBR5 109 aa15.5■□□□□ 0.07
PTPN18-213ENST00000489215 ABCA13Q86UQ4 5058 aa15.49■□□□□ 0.07
PTPN18-213ENST00000489215 TMEM218A2RU14 115 aa15.49■□□□□ 0.07
PTPN18-213ENST00000489215 XCL1P47992 114 aa15.49■□□□□ 0.07
PTPN18-213ENST00000489215 FOXI1Q12951 378 aa15.49■□□□□ 0.07
PTPN18-213ENST00000489215 CD164L2Q6UWJ8 174 aa15.49■□□□□ 0.07
PTPN18-213ENST00000489215 SDIM1Q6ZPB5 146 aa15.49■□□□□ 0.07
PTPN18-213ENST00000489215 C15orf56Q8N910 161 aa15.49■□□□□ 0.07
PTPN18-213ENST00000489215 PRELID3AQ96N28 172 aa15.49■□□□□ 0.07
PTPN18-213ENST00000489215 NPYP01303 97 aa15.48■□□□□ 0.07
PTPN18-213ENST00000489215 RAB5AP20339 215 aa15.48■□□□□ 0.07
PTPN18-213ENST00000489215 LINC00528Q8N1L1 170 aa15.48■□□□□ 0.07
PTPN18-213ENST00000489215 CTDSP1Q9GZU7 261 aa15.48■□□□□ 0.07
PTPN18-213ENST00000489215 GVQW2A0A096LPI5 108 aaPredicted RBP15.46■□□□□ 0.07
PTPN18-213ENST00000489215 IGHV1-58A0A0C4DH39 117 aa15.46■□□□□ 0.07
PTPN18-213ENST00000489215 SEC11CQ9BY50 192 aa15.46■□□□□ 0.07
PTPN18-213ENST00000489215 PRSS47A8MTI9 375 aa15.45■□□□□ 0.06
PTPN18-213ENST00000489215 SPANXA1Q9NS26 97 aa15.45■□□□□ 0.06
PTPN18-213ENST00000489215 PKIGQ9Y2B9 76 aa15.44■□□□□ 0.06
PTPN18-213ENST00000489215 TRAV9-1A0A075B6T8 112 aa15.43■□□□□ 0.06
PTPN18-213ENST00000489215 SLPIP03973 132 aa15.43■□□□□ 0.06
PTPN18-213ENST00000489215 HIGD2BQ4VC39 106 aa15.43■□□□□ 0.06
PTPN18-213ENST00000489215 MAP1LC3AQ9H492 121 aa15.43■□□□□ 0.06
PTPN18-213ENST00000489215 ADCYAP1P18509 176 aa15.41■□□□□ 0.06
PTPN18-213ENST00000489215 ZNF561-AS1K7EIQ3 104 aa15.4■□□□□ 0.06
PTPN18-213ENST00000489215 MALP21145 153 aa15.4■□□□□ 0.06
PTPN18-213ENST00000489215 MRPS36P82909 103 aaKnown RBP15.4■□□□□ 0.06
PTPN18-213ENST00000489215 DPH3Q96FX2 82 aa15.4■□□□□ 0.06
PTPN18-213ENST00000489215 DNAH8Q96JB1 4490 aa15.4■□□□□ 0.06
PTPN18-213ENST00000489215 TRAV13-1A0A0B4J241 112 aa15.39■□□□□ 0.05
PTPN18-213ENST00000489215 K7EMI3 77 aa15.39■□□□□ 0.05
PTPN18-213ENST00000489215 COX7A2LO14548 114 aa15.39■□□□□ 0.05
PTPN18-213ENST00000489215 S100PP25815 95 aa15.39■□□□□ 0.05
PTPN18-213ENST00000489215 RPL39P62891 51 aaKnown RBP15.39■□□□□ 0.05
PTPN18-213ENST00000489215 CIRBPQ14011 172 aaKnown RBP15.39■□□□□ 0.05
PTPN18-213ENST00000489215 Q6ZUT4 128 aa15.39■□□□□ 0.05
PTPN18-213ENST00000489215 COMMD7Q86VX2 200 aa15.39■□□□□ 0.05
PTPN18-213ENST00000489215 IFI27P40305 119 aaPredicted RBP15.38■□□□□ 0.05
PTPN18-213ENST00000489215 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.38■□□□□ 0.05
PTPN18-213ENST00000489215 APOMO95445 188 aa15.37■□□□□ 0.05
PTPN18-213ENST00000489215 RNASE13Q5GAN3 156 aaKnown RBP15.37■□□□□ 0.05
PTPN18-213ENST00000489215 PYGO1Q9Y3Y4 419 aa15.37■□□□□ 0.05
PTPN18-213ENST00000489215 FAT1Q14517 4588 aa15.36■□□□□ 0.05
PTPN18-213ENST00000489215 Q8N8P6 123 aa15.36■□□□□ 0.05
PTPN18-213ENST00000489215 SRRM2Q9UQ35 2752 aaKnown RBP15.36■□□□□ 0.05
PTPN18-213ENST00000489215 LOC389332A0A1B0GUA5 103 aa15.35■□□□□ 0.05
PTPN18-213ENST00000489215 G0S2P27469 103 aa15.35■□□□□ 0.05
PTPN18-213ENST00000489215 COX19Q49B96 90 aa15.34■□□□□ 0.05
PTPN18-213ENST00000489215 ORMDL2Q53FV1 153 aa15.34■□□□□ 0.05
PTPN18-213ENST00000489215 NXT2Q9NPJ8 142 aaKnown RBP15.34■□□□□ 0.05
PTPN18-213ENST00000489215 COX6A2Q02221 97 aa15.33■□□□□ 0.04
PTPN18-213ENST00000489215 LINC00474Q9P2X8 69 aa15.33■□□□□ 0.04
PTPN18-213ENST00000489215 SYCNQ0VAF6 134 aa15.32■□□□□ 0.04
PTPN18-213ENST00000489215 C10orf91Q5T1B1 145 aa15.32■□□□□ 0.04
PTPN18-213ENST00000489215 SPACA4Q8TDM5 124 aa15.32■□□□□ 0.04
PTPN18-213ENST00000489215 CARD19Q96LW7 228 aa15.32■□□□□ 0.04
PTPN18-213ENST00000489215 CYSLTR1Q9Y271 337 aa15.32■□□□□ 0.04
PTPN18-213ENST00000489215 IFITM10A6NMD0 228 aa15.3■□□□□ 0.04
PTPN18-213ENST00000489215 PANO1I0J062 215 aa15.3■□□□□ 0.04
PTPN18-213ENST00000489215 NPSP0C0P6 89 aa15.3■□□□□ 0.04
PTPN18-213ENST00000489215 RHEBQ15382 184 aa15.3■□□□□ 0.04
PTPN18-213ENST00000489215 GNB1LQ9BYB4 327 aa15.3■□□□□ 0.04
PTPN18-213ENST00000489215 A0A087WYN8 130 aa15.29■□□□□ 0.04
PTPN18-213ENST00000489215 RPL37AP61513 92 aaKnown RBP15.29■□□□□ 0.04
PTPN18-213ENST00000489215 C5orf38Q86SI9 138 aa15.29■□□□□ 0.04
PTPN18-213ENST00000489215 PRSS3P2Q8NHM4 247 aa15.29■□□□□ 0.04
PTPN18-213ENST00000489215 FAM104AQ969W3 186 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms