RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 SMAGPQ0VAQ4 97 aa4.74□□□□□ -1.65
RN7SL561P-201ENST00000488553 RNASE13Q5GAN3 156 aaKnown RBP4.74□□□□□ -1.65
RN7SL561P-201ENST00000488553 FAM222AQ5U5X8 452 aa4.74□□□□□ -1.65
RN7SL561P-201ENST00000488553 DGAT2L7PQ6IED9 249 aa4.74□□□□□ -1.65
RN7SL561P-201ENST00000488553 Q6ZUT4 128 aa4.74□□□□□ -1.65
RN7SL561P-201ENST00000488553 CEND1Q8N111 149 aa4.74□□□□□ -1.65
RN7SL561P-201ENST00000488553 C3orf56Q8N813 242 aa4.74□□□□□ -1.65
RN7SL561P-201ENST00000488553 PLEKHB2Q96CS7 222 aa4.74□□□□□ -1.65
RN7SL561P-201ENST00000488553 RNF183Q96D59 192 aa4.74□□□□□ -1.65
RN7SL561P-201ENST00000488553 CDC42SE2Q9NRR3 84 aa4.74□□□□□ -1.65
RN7SL561P-201ENST00000488553 NACAE9PAV3 2078 aa4.74□□□□□ -1.65
RN7SL561P-201ENST00000488553 IGLV5-45A0A087WSX0 123 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 TRBV6-8A0A0A6YYG3 113 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 IGHV4-28A0A0C4DH34 117 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 A8MZ25 164 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 SMIM13P0DJ93 91 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 MIFP14174 115 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 GCSHP23434 173 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 FXYD2P54710 66 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 EGFEM1PQ0D2K5 195 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 DEFB135Q30KP9 77 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 OXLD1Q5BKU9 147 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 PRIMA1Q86XR5 153 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 LINC00469Q8N7U9 141 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 Q8NAQ8 132 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 OR5A1Q8NGJ0 315 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 HIST1H4GQ99525 98 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 TMEM243Q9BU79 118 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 PRO0255Q9UI72 69 aa4.73□□□□□ -1.65
RN7SL561P-201ENST00000488553 IGHV1-58A0A0C4DH39 117 aa4.72□□□□□ -1.65
RN7SL561P-201ENST00000488553 A0A0J9YY99 117 aa4.72□□□□□ -1.65
RN7SL561P-201ENST00000488553 C9orf118A6NHY6 69 aa4.72□□□□□ -1.65
RN7SL561P-201ENST00000488553 K7EP13 123 aa4.72□□□□□ -1.65
RN7SL561P-201ENST00000488553 IGHV3-30-3P0DP02 117 aa4.72□□□□□ -1.65
RN7SL561P-201ENST00000488553 LGALS3P17931 250 aaKnown RBP4.72□□□□□ -1.65
RN7SL561P-201ENST00000488553 COX6A2Q02221 97 aa4.72□□□□□ -1.65
RN7SL561P-201ENST00000488553 UBE2V1Q13404 147 aa4.72□□□□□ -1.65
RN7SL561P-201ENST00000488553 A0A1B0GWB2 263 aa4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 DEFB4AO15263 64 aa4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 CCL25O15444 150 aa4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 SPART-AS1P0CW21 52 aa4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 GYPEP15421 78 aa4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 PTTG1IPP53801 180 aa4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 C12orf74Q32Q52 190 aa4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 LINC00242Q5T6M2 205 aa4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 AMMECR1LQ6DCA0 310 aa4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 SCGB1D4Q6XE38 83 aa4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 ATP6V0E2Q8NHE4 81 aa4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 TMEM101Q96IK0 257 aa4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 VSIG2Q96IQ7 327 aa4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 GEMIN7Q9H840 131 aaKnown RBP4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 SPANXB1Q9NS25 103 aaPredicted RBP4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 CDKN2A-AS1Q9UH64 79 aa4.71□□□□□ -1.66
RN7SL561P-201ENST00000488553 IGHV3-64A0A075B6Q5 118 aa4.7□□□□□ -1.66
RN7SL561P-201ENST00000488553 TRAV8-3A0A0A6YYJ7 113 aa4.7□□□□□ -1.66
RN7SL561P-201ENST00000488553 UBE2L6O14933 153 aa4.7□□□□□ -1.66
RN7SL561P-201ENST00000488553 PAX4O43316 350 aa4.7□□□□□ -1.66
RN7SL561P-201ENST00000488553 DAD1P61803 113 aa4.7□□□□□ -1.66
RN7SL561P-201ENST00000488553 HERVK_113P63121 156 aa4.7□□□□□ -1.66
RN7SL561P-201ENST00000488553 GAGE6Q13070 117 aa4.7□□□□□ -1.66
RN7SL561P-201ENST00000488553 SRSF9Q13242 221 aaKnown RBP eCLIP4.7□□□□□ -1.66
RN7SL561P-201ENST00000488553 NIPBLQ6KC79 2804 aaeCLIP4.7□□□□□ -1.66
RN7SL561P-201ENST00000488553 TENM1Q9UKZ4 2725 aa4.7□□□□□ -1.66
RN7SL561P-201ENST00000488553 IGLV5-39A0A0G2JS06 123 aa4.69□□□□□ -1.66
RN7SL561P-201ENST00000488553 A0A0J9YXY3 114 aa4.69□□□□□ -1.66
RN7SL561P-201ENST00000488553 IGHV3-30P01768 117 aa4.69□□□□□ -1.66
RN7SL561P-201ENST00000488553 ATP5G1P05496 136 aa4.69□□□□□ -1.66
RN7SL561P-201ENST00000488553 SPINK8P0C7L1 97 aa4.69□□□□□ -1.66
RN7SL561P-201ENST00000488553 IGHV3-30-5P0DP03 117 aa4.69□□□□□ -1.66
RN7SL561P-201ENST00000488553 VAMP3Q15836 100 aa4.69□□□□□ -1.66
RN7SL561P-201ENST00000488553 C10orf126Q8N4M7 172 aa4.69□□□□□ -1.66
RN7SL561P-201ENST00000488553 RAB37Q96AX2 223 aa4.69□□□□□ -1.66
RN7SL561P-201ENST00000488553 CHCHD5Q9BSY4 110 aa4.69□□□□□ -1.66
RN7SL561P-201ENST00000488553 NHP2Q9NX24 153 aaKnown RBP4.69□□□□□ -1.66
RN7SL561P-201ENST00000488553 CELA1Q9UNI1 258 aa4.69□□□□□ -1.66
RN7SL561P-201ENST00000488553 IGLV4-60A0A075B6I1 120 aa4.68□□□□□ -1.66
RN7SL561P-201ENST00000488553 TRAV26-1A0A087WT03 109 aa4.68□□□□□ -1.66
RN7SL561P-201ENST00000488553 TRAV13-1A0A0B4J241 112 aa4.68□□□□□ -1.66
RN7SL561P-201ENST00000488553 A0A1B0GUV1 79 aa4.68□□□□□ -1.66
RN7SL561P-201ENST00000488553 A0A1W2PPM0 123 aa4.68□□□□□ -1.66
RN7SL561P-201ENST00000488553 IGLL5B9A064 214 aa4.68□□□□□ -1.66
RN7SL561P-201ENST00000488553 F5H768 121 aa4.68□□□□□ -1.66
RN7SL561P-201ENST00000488553 H3BUT2 72 aa4.68□□□□□ -1.66
RN7SL561P-201ENST00000488553 K7ERJ3 54 aa4.68□□□□□ -1.66
RN7SL561P-201ENST00000488553 SAMD5Q5TGI4 173 aa4.68□□□□□ -1.66
RN7SL561P-201ENST00000488553 ZFAND6Q6FIF0 208 aa4.68□□□□□ -1.66
RN7SL561P-201ENST00000488553 LITAFQ99732 161 aa4.68□□□□□ -1.66
RN7SL561P-201ENST00000488553 NDUFA12Q9UI09 145 aa4.68□□□□□ -1.66
RN7SL561P-201ENST00000488553 JMJD1CQ15652 2540 aa4.68□□□□□ -1.66
RN7SL561P-201ENST00000488553 F8P00451 2351 aa4.67□□□□□ -1.66
RN7SL561P-201ENST00000488553 TEX48A0A1B0GUV7 120 aa4.67□□□□□ -1.66
RN7SL561P-201ENST00000488553 TMEM238LA0A1B0GVL6 79 aa4.67□□□□□ -1.66
RN7SL561P-201ENST00000488553 A6NJY4 79 aa4.67□□□□□ -1.66
RN7SL561P-201ENST00000488553 GAGE10A6NGK3 116 aa4.66□□□□□ -1.66
RN7SL561P-201ENST00000488553 SMIM1B2RUZ4 78 aa4.66□□□□□ -1.66
RN7SL561P-201ENST00000488553 TMEM238C9JI98 176 aa4.66□□□□□ -1.66
RN7SL561P-201ENST00000488553 G3V4G9 280 aa4.66□□□□□ -1.66
RN7SL561P-201ENST00000488553 K7EP34 96 aa4.66□□□□□ -1.66
RN7SL561P-201ENST00000488553 NDUFA1O15239 70 aa4.66□□□□□ -1.66
RN7SL561P-201ENST00000488553 TIMM17BO60830 172 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms