RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 TEX15Q9BXT5 2789 aa10.41□□□□□ -0.74
RER1-207ENST00000488353 TLN2Q9Y4G6 2542 aa10.41□□□□□ -0.74
RER1-207ENST00000488353 TIMM17BO60830 172 aa10.4□□□□□ -0.74
RER1-207ENST00000488353 ID1P41134 155 aa10.4□□□□□ -0.74
RER1-207ENST00000488353 ZNF469Q96JG9 3925 aaPredicted RBP10.4□□□□□ -0.74
RER1-207ENST00000488353 CSDC2Q9Y534 153 aaKnown RBP10.39□□□□□ -0.75
RER1-207ENST00000488353 APCP25054 2843 aa10.39□□□□□ -0.75
RER1-207ENST00000488353 TINCRA0A1B0GVN0 87 aa10.39□□□□□ -0.75
RER1-207ENST00000488353 HERVK_113P63121 156 aa10.39□□□□□ -0.75
RER1-207ENST00000488353 SMCR5Q8TEV8 140 aa10.39□□□□□ -0.75
RER1-207ENST00000488353 FAM104AQ969W3 186 aa10.39□□□□□ -0.75
RER1-207ENST00000488353 DUX5Q96PT3 197 aa10.39□□□□□ -0.75
RER1-207ENST00000488353 CXCL5P42830 114 aa10.38□□□□□ -0.75
RER1-207ENST00000488353 SDIM1Q6ZPB5 146 aa10.38□□□□□ -0.75
RER1-207ENST00000488353 CFHR3Q02985 330 aa10.37□□□□□ -0.75
RER1-207ENST00000488353 LRRC75A-AS1Q8N1F1 130 aa10.37□□□□□ -0.75
RER1-207ENST00000488353 CITED2Q99967 270 aaPredicted RBP10.37□□□□□ -0.75
RER1-207ENST00000488353 CR1P17927 2039 aa10.37□□□□□ -0.75
RER1-207ENST00000488353 A8MZ25 164 aa10.36□□□□□ -0.75
RER1-207ENST00000488353 COX7A2LO14548 114 aa10.36□□□□□ -0.75
RER1-207ENST00000488353 K7EMT4 169 aa10.36□□□□□ -0.75
RER1-207ENST00000488353 IGHV4-31P0DP07 118 aa10.36□□□□□ -0.75
RER1-207ENST00000488353 SPINK13Q1W4C9 94 aa10.36□□□□□ -0.75
RER1-207ENST00000488353 CCDC168Q8NDH2 2452 aa10.36□□□□□ -0.75
RER1-207ENST00000488353 A0A1B0GX51 115 aa10.35□□□□□ -0.75
RER1-207ENST00000488353 J3KT08 172 aa10.35□□□□□ -0.75
RER1-207ENST00000488353 CIRBPQ14011 172 aaKnown RBP10.35□□□□□ -0.75
RER1-207ENST00000488353 LOC107984640A0A0U1RRK4 108 aa10.35□□□□□ -0.75
RER1-207ENST00000488353 COX7CP15954 63 aa10.35□□□□□ -0.75
RER1-207ENST00000488353 C5orf47Q569G3 176 aa10.35□□□□□ -0.75
RER1-207ENST00000488353 C5orf38Q86SI9 138 aa10.35□□□□□ -0.75
RER1-207ENST00000488353 PEMTQ9UBM1 199 aa10.35□□□□□ -0.75
RER1-207ENST00000488353 IGHV1OR15-1A0A075B7D0 117 aa10.34□□□□□ -0.75
RER1-207ENST00000488353 PSMB8P28062 276 aa10.34□□□□□ -0.75
RER1-207ENST00000488353 DAZ2Q13117 558 aaKnown RBP10.34□□□□□ -0.75
RER1-207ENST00000488353 DEFB113Q30KQ7 82 aa10.34□□□□□ -0.75
RER1-207ENST00000488353 RNASE13Q5GAN3 156 aaKnown RBP10.34□□□□□ -0.75
RER1-207ENST00000488353 DAZ4Q86SG3 579 aaKnown RBP10.34□□□□□ -0.75
RER1-207ENST00000488353 DAND5Q8N907 189 aa10.34□□□□□ -0.75
RER1-207ENST00000488353 DAZ3Q9NR90 486 aaKnown RBP10.34□□□□□ -0.75
RER1-207ENST00000488353 KMT2BQ9UMN6 2715 aaPredicted RBP10.34□□□□□ -0.75
RER1-207ENST00000488353 SONP18583 2426 aaKnown RBP10.34□□□□□ -0.75
RER1-207ENST00000488353 J3QLI3 93 aa10.34□□□□□ -0.75
RER1-207ENST00000488353 HELZ2Q9BYK8 2649 aaKnown RBP10.34□□□□□ -0.75
RER1-207ENST00000488353 SYNJ2BPP57105 145 aa10.33□□□□□ -0.76
RER1-207ENST00000488353 Q96MF0 132 aa10.33□□□□□ -0.76
RER1-207ENST00000488353 NDUFA1O15239 70 aa10.33□□□□□ -0.76
RER1-207ENST00000488353 TRACP01848 142 aa10.33□□□□□ -0.76
RER1-207ENST00000488353 HTN1P15515 57 aa10.33□□□□□ -0.76
RER1-207ENST00000488353 HIST2H2BCQ6DN03 193 aa10.33□□□□□ -0.76
RER1-207ENST00000488353 EDA2RQ9HAV5 297 aa10.33□□□□□ -0.76
RER1-207ENST00000488353 MYO9AB2RTY4 2548 aa10.32□□□□□ -0.76
RER1-207ENST00000488353 SNRPD3P62318 126 aaKnown RBP10.32□□□□□ -0.76
RER1-207ENST00000488353 BAALC-AS2P0C853 105 aa10.32□□□□□ -0.76
RER1-207ENST00000488353 CRYGAP11844 174 aa10.32□□□□□ -0.76
RER1-207ENST00000488353 RPS28P62857 69 aaKnown RBP10.32□□□□□ -0.76
RER1-207ENST00000488353 LINC00308Q8TCZ7 52 aa10.32□□□□□ -0.76
RER1-207ENST00000488353 GAGE2AQ6NT46 116 aa10.31□□□□□ -0.76
RER1-207ENST00000488353 ITPR3Q14573 2671 aa10.31□□□□□ -0.76
RER1-207ENST00000488353 INAFM2P0DMQ5 153 aa10.31□□□□□ -0.76
RER1-207ENST00000488353 FAM19A5Q7Z5A7 132 aaPredicted RBP10.31□□□□□ -0.76
RER1-207ENST00000488353 COPS9Q8WXC6 57 aa10.31□□□□□ -0.76
RER1-207ENST00000488353 UBE2D4Q9Y2X8 147 aa10.31□□□□□ -0.76
RER1-207ENST00000488353 KLK5Q9Y337 293 aaPredicted RBP10.31□□□□□ -0.76
RER1-207ENST00000488353 IGHV3-73A0A0B4J1V6 119 aa10.3□□□□□ -0.76
RER1-207ENST00000488353 K7EQG2 157 aa10.3□□□□□ -0.76
RER1-207ENST00000488353 SMIM9A6NGZ8 99 aa10.3□□□□□ -0.76
RER1-207ENST00000488353 ATOX1O00244 68 aa10.3□□□□□ -0.76
RER1-207ENST00000488353 BEAN1Q3B7T3 259 aa10.3□□□□□ -0.76
RER1-207ENST00000488353 C2orf48Q96LS8 159 aa10.3□□□□□ -0.76
RER1-207ENST00000488353 FSHBP01225 129 aa10.29□□□□□ -0.76
RER1-207ENST00000488353 TIRAPP58753 221 aa10.29□□□□□ -0.76
RER1-207ENST00000488353 CDKN2A-AS1Q9UH64 79 aa10.29□□□□□ -0.76
RER1-207ENST00000488353 PRM2P04554 102 aa10.29□□□□□ -0.76
RER1-207ENST00000488353 FAM222AQ5U5X8 452 aa10.29□□□□□ -0.76
RER1-207ENST00000488353 Q6YL49 198 aa10.29□□□□□ -0.76
RER1-207ENST00000488353 HIST1H4AP62805 103 aaKnown RBP10.28□□□□□ -0.76
RER1-207ENST00000488353 KRTAP1-3Q8IUG1 177 aa10.28□□□□□ -0.76
RER1-207ENST00000488353 CHCHD7Q9BUK0 85 aa10.28□□□□□ -0.76
RER1-207ENST00000488353 NACAE9PAV3 2078 aa10.28□□□□□ -0.76
RER1-207ENST00000488353 IGLV5-45A0A087WSX0 123 aa10.27□□□□□ -0.77
RER1-207ENST00000488353 PROK1P58294 105 aa10.27□□□□□ -0.77
RER1-207ENST00000488353 Q8N2B8 174 aa10.27□□□□□ -0.77
RER1-207ENST00000488353 ZNF702PQ9H963 129 aa10.27□□□□□ -0.77
RER1-207ENST00000488353 FLNAP21333 2647 aaKnown RBP10.27□□□□□ -0.77
RER1-207ENST00000488353 KNCNA6PVL3 124 aa10.27□□□□□ -0.77
RER1-207ENST00000488353 Q9H8V8 135 aa10.27□□□□□ -0.77
RER1-207ENST00000488353 C22orf24Q9Y442 160 aa10.26□□□□□ -0.77
RER1-207ENST00000488353 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.26□□□□□ -0.77
RER1-207ENST00000488353 IGKV2-29A2NJV5 120 aaPredicted RBP10.26□□□□□ -0.77
RER1-207ENST00000488353 RBMY1A1P0DJD3 496 aaKnown RBP10.26□□□□□ -0.77
RER1-207ENST00000488353 RBMY1CP0DJD4 496 aa10.26□□□□□ -0.77
RER1-207ENST00000488353 HOXD3P31249 432 aaPredicted RBP10.26□□□□□ -0.77
RER1-207ENST00000488353 RBMY1FQ15415 496 aaKnown RBP10.26□□□□□ -0.77
RER1-207ENST00000488353 WFDC11Q8NEX6 87 aa10.26□□□□□ -0.77
RER1-207ENST00000488353 OR13C6PQ8NH95 151 aa10.26□□□□□ -0.77
RER1-207ENST00000488353 GCN1Q92616 2671 aaKnown RBP10.26□□□□□ -0.77
RER1-207ENST00000488353 HIST2H2BDQ6DRA6 164 aa10.25□□□□□ -0.77
RER1-207ENST00000488353 CUBNO60494 3623 aa10.25□□□□□ -0.77
RER1-207ENST00000488353 DEFB136Q30KP8 78 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms