RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 A0A0U1RQV1 116 aa2.28□□□□□ -2.04
ECHDC1-217ENST00000488087 C8orf87E5RJ46 101 aa2.28□□□□□ -2.04
ECHDC1-217ENST00000488087 I3L3M4 83 aa2.28□□□□□ -2.04
ECHDC1-217ENST00000488087 TRBV12-3P01733 135 aa2.28□□□□□ -2.04
ECHDC1-217ENST00000488087 SAA1P0DJI8 122 aaPredicted RBP2.28□□□□□ -2.04
ECHDC1-217ENST00000488087 SAA2P0DJI9 122 aaPredicted RBP2.28□□□□□ -2.04
ECHDC1-217ENST00000488087 TSPEAR-AS2P59090 65 aa2.28□□□□□ -2.04
ECHDC1-217ENST00000488087 RBMY1FQ15415 496 aaKnown RBP2.28□□□□□ -2.04
ECHDC1-217ENST00000488087 MIAQ16674 131 aa2.28□□□□□ -2.04
ECHDC1-217ENST00000488087 ZNF826PQ6ZT77 177 aa2.28□□□□□ -2.04
ECHDC1-217ENST00000488087 DYNAPQ8N1N2 210 aa2.28□□□□□ -2.04
ECHDC1-217ENST00000488087 MRPL36Q9P0J6 103 aaKnown RBP2.28□□□□□ -2.04
ECHDC1-217ENST00000488087 DYSFO75923 2080 aa2.28□□□□□ -2.04
ECHDC1-217ENST00000488087 LTBP2Q14767 1821 aa2.28□□□□□ -2.04
ECHDC1-217ENST00000488087 IGHV3-15A0A0B4J1V0 119 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 IGHV3-43A0A0B4J1X8 118 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 TRAV13-2A0A0B4J235 113 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 IGHV1-18A0A0C4DH31 117 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 IGHV7-4-1A0A0J9YVY3 117 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 TRBV6-5A0A0K0K1A5 114 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 SPTY2D1-AS1A0A0U1RR47 76 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 LRCOL1A6NCL2 159 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 M0R3E3 92 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 MRPL33O75394 65 aaKnown RBP2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 ERC2-IT1O76042 136 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 CCKP06307 115 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 DAZ4Q86SG3 579 aaKnown RBP2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 PATE1Q8WXA2 126 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 RNASE6Q93091 150 aaKnown RBP2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 CCL13Q99616 98 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 DAZ1Q9NQZ3 744 aaKnown RBP2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 RBM12B-AS1Q9P1G2 102 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 C22orf24Q9Y442 160 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 LENEPQ9Y5L5 61 aa2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 GOLGA4Q13439 2230 aaKnown RBP2.27□□□□□ -2.05
ECHDC1-217ENST00000488087 IGHV1-58A0A0C4DH39 117 aa2.26□□□□□ -2.05
ECHDC1-217ENST00000488087 TRBV27A0A0K0K1C4 114 aa2.26□□□□□ -2.05
ECHDC1-217ENST00000488087 FAM223BA6NKX1 122 aa2.26□□□□□ -2.05
ECHDC1-217ENST00000488087 DEFB108AA8MXU0 73 aa2.26□□□□□ -2.05
ECHDC1-217ENST00000488087 I3L2K1 104 aa2.26□□□□□ -2.05
ECHDC1-217ENST00000488087 IGLV3-19P01714 112 aa2.26□□□□□ -2.05
ECHDC1-217ENST00000488087 BAALC-AS2P0C853 105 aa2.26□□□□□ -2.05
ECHDC1-217ENST00000488087 POLR2KP53803 58 aaKnown RBP2.26□□□□□ -2.05
ECHDC1-217ENST00000488087 SYCNQ0VAF6 134 aa2.26□□□□□ -2.05
ECHDC1-217ENST00000488087 C6orf99Q4VX62 202 aa2.26□□□□□ -2.05
ECHDC1-217ENST00000488087 BRK1Q8WUW1 75 aa2.26□□□□□ -2.05
ECHDC1-217ENST00000488087 CCL17Q92583 94 aa2.26□□□□□ -2.05
ECHDC1-217ENST00000488087 RNF5Q99942 180 aa2.26□□□□□ -2.05
ECHDC1-217ENST00000488087 A0A0C4DFX4 3053 aa2.26□□□□□ -2.05
ECHDC1-217ENST00000488087 USF3Q68DE3 2245 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 IGKV1D-17A0A075B6S4 117 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 TRAV8-3A0A0A6YYJ7 113 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 E7EUB6 86 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 BPY2O14599 106 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 DNAL4O96015 105 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 LHBP01229 141 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 IGKV1-17P01599 117 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 TRGV3P03979 118 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 IGKV1-16P04430 117 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 RPL28P46779 137 aaKnown RBP2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 KLK9Q2XQG4 91 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 Q5W150 140 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 NTM-AS1Q6ZSK4 140 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 VMO1Q7Z5L0 202 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 GPHB5Q86YW7 130 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 FAM223AQ8IWN6 122 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 Q8N2B8 174 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 WFDC11Q8NEX6 87 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 CLEC2BQ92478 149 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 KLK9Q9UKQ9 250 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 MYO9BQ13459 2157 aa2.25□□□□□ -2.05
ECHDC1-217ENST00000488087 HEATR1Q9H583 2144 aaKnown RBP2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 C5orf67F2Z3F1 127 aa2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 JMJD7-PLA2G4BH0Y9G9 81 aa2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 H0YGX0 51 aa2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 H7C2G1 150 aa2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 NDUFB3O43676 98 aa2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 NDUFS5O43920 106 aa2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 CCL3P10147 92 aa2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 RNASE4P34096 147 aaKnown RBP2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 RPL27AP46776 148 aaKnown RBP2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 BLCAPP62952 87 aa2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 Q1T7F1 81 aa2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 SPANXN1Q5VSR9 72 aa2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 C20orf197Q8N268 126 aa2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 TM2D3Q9BRN9 247 aa2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 LINC00846Q9NV44 126 aa2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 TET1Q8NFU7 2136 aa2.24□□□□□ -2.05
ECHDC1-217ENST00000488087 IGHV6-1A0A0B4J1U7 121 aa2.23□□□□□ -2.05
ECHDC1-217ENST00000488087 K7EIM0 57 aa2.23□□□□□ -2.05
ECHDC1-217ENST00000488087 NDUFA1O15239 70 aa2.23□□□□□ -2.05
ECHDC1-217ENST00000488087 IGHV3-30-3P0DP02 117 aa2.23□□□□□ -2.05
ECHDC1-217ENST00000488087 CIRBPQ14011 172 aaKnown RBP2.23□□□□□ -2.05
ECHDC1-217ENST00000488087 ESRGQ1W209 222 aa2.23□□□□□ -2.05
ECHDC1-217ENST00000488087 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
ECHDC1-217ENST00000488087 DYNLRB2Q8TF09 96 aa2.23□□□□□ -2.05
ECHDC1-217ENST00000488087 SPAG17Q6Q759 2223 aa2.23□□□□□ -2.05
ECHDC1-217ENST00000488087 PCNTO95613 3336 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 A0A087WVE0 104 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms