RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 MAJINQ3KP22 176 aa5.37□□□□□ -1.55
PRKCB-208ENST00000487674 RNASEKQ6P5S7 137 aaKnown RBP5.37□□□□□ -1.55
PRKCB-208ENST00000487674 TEX261Q6UWH6 196 aa5.37□□□□□ -1.55
PRKCB-208ENST00000487674 SMIM15Q7Z3B0 74 aa5.37□□□□□ -1.55
PRKCB-208ENST00000487674 RPL39LQ96EH5 51 aaKnown RBP5.37□□□□□ -1.55
PRKCB-208ENST00000487674 PKIGQ9Y2B9 76 aa5.37□□□□□ -1.55
PRKCB-208ENST00000487674 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.36□□□□□ -1.55
PRKCB-208ENST00000487674 IGKV2-29A2NJV5 120 aaPredicted RBP5.36□□□□□ -1.55
PRKCB-208ENST00000487674 SDHAF1A6NFY7 115 aa5.36□□□□□ -1.55
PRKCB-208ENST00000487674 ZNF561-AS1K7EIQ3 104 aa5.36□□□□□ -1.55
PRKCB-208ENST00000487674 K7EN84 100 aa5.36□□□□□ -1.55
PRKCB-208ENST00000487674 FOXI1Q12951 378 aa5.36□□□□□ -1.55
PRKCB-208ENST00000487674 STPG4Q8N801 248 aa5.36□□□□□ -1.55
PRKCB-208ENST00000487674 PRSS3P2Q8NHM4 247 aa5.36□□□□□ -1.55
PRKCB-208ENST00000487674 GTSF1Q8WW33 167 aa5.36□□□□□ -1.55
PRKCB-208ENST00000487674 RNASE7Q9H1E1 156 aaKnown RBP5.36□□□□□ -1.55
PRKCB-208ENST00000487674 LINC00474Q9P2X8 69 aa5.36□□□□□ -1.55
PRKCB-208ENST00000487674 hCG_2014768A0A024R1R8 64 aa5.35□□□□□ -1.55
PRKCB-208ENST00000487674 A0A096LNI7 61 aa5.35□□□□□ -1.55
PRKCB-208ENST00000487674 C9orf118A6NHY6 69 aa5.35□□□□□ -1.55
PRKCB-208ENST00000487674 OR5A1Q8NGJ0 315 aa5.35□□□□□ -1.55
PRKCB-208ENST00000487674 LINC01600Q96MT4 127 aa5.35□□□□□ -1.55
PRKCB-208ENST00000487674 IGHV1-58A0A0C4DH39 117 aa5.34□□□□□ -1.55
PRKCB-208ENST00000487674 TRBV6-5A0A0K0K1A5 114 aa5.34□□□□□ -1.55
PRKCB-208ENST00000487674 I3L3M4 83 aa5.34□□□□□ -1.55
PRKCB-208ENST00000487674 XCL1P47992 114 aa5.34□□□□□ -1.55
PRKCB-208ENST00000487674 SLC51BQ86UW2 128 aa5.34□□□□□ -1.55
PRKCB-208ENST00000487674 OCC1Q8TAD7 63 aa5.34□□□□□ -1.55
PRKCB-208ENST00000487674 TMEM101Q96IK0 257 aa5.34□□□□□ -1.55
PRKCB-208ENST00000487674 BTF3L4Q96K17 158 aa5.34□□□□□ -1.55
PRKCB-208ENST00000487674 CARD19Q96LW7 228 aa5.34□□□□□ -1.55
PRKCB-208ENST00000487674 LINC00959A0A1B0GUT2 108 aa5.33□□□□□ -1.56
PRKCB-208ENST00000487674 FAM231BA6NCW3 169 aa5.33□□□□□ -1.56
PRKCB-208ENST00000487674 CCL25O15444 150 aa5.33□□□□□ -1.56
PRKCB-208ENST00000487674 PMCHP20382 165 aa5.33□□□□□ -1.56
PRKCB-208ENST00000487674 FOXA3P55318 350 aaPredicted RBP5.33□□□□□ -1.56
PRKCB-208ENST00000487674 CT83Q5H943 113 aa5.33□□□□□ -1.56
PRKCB-208ENST00000487674 FAM231DQ6ZW35 169 aa5.33□□□□□ -1.56
PRKCB-208ENST00000487674 TCTE3Q8IZS6 198 aa5.33□□□□□ -1.56
PRKCB-208ENST00000487674 LYPD6BQ8NI32 183 aa5.33□□□□□ -1.56
PRKCB-208ENST00000487674 MRAP2Q96G30 205 aa5.33□□□□□ -1.56
PRKCB-208ENST00000487674 FAM210AQ96ND0 272 aa5.33□□□□□ -1.56
PRKCB-208ENST00000487674 TNXBP22105 4242 aa5.33□□□□□ -1.56
PRKCB-208ENST00000487674 A0A0J9YXV3 536 aa5.32□□□□□ -1.56
PRKCB-208ENST00000487674 A8MWL6 223 aa5.32□□□□□ -1.56
PRKCB-208ENST00000487674 TMEM250H0YL14 139 aa5.32□□□□□ -1.56
PRKCB-208ENST00000487674 GATCO43716 136 aaKnown RBP5.32□□□□□ -1.56
PRKCB-208ENST00000487674 TSHBP01222 138 aa5.32□□□□□ -1.56
PRKCB-208ENST00000487674 ESDP10768 282 aa5.32□□□□□ -1.56
PRKCB-208ENST00000487674 REG3GQ6UW15 175 aa5.32□□□□□ -1.56
PRKCB-208ENST00000487674 SPINK6Q6UWN8 80 aa5.32□□□□□ -1.56
PRKCB-208ENST00000487674 MRPL52Q86TS9 123 aaKnown RBP5.32□□□□□ -1.56
PRKCB-208ENST00000487674 BORCS7Q96B45 105 aa5.32□□□□□ -1.56
PRKCB-208ENST00000487674 ST20Q9HBF5 79 aa5.32□□□□□ -1.56
PRKCB-208ENST00000487674 TMEM242Q9NWH2 141 aa5.32□□□□□ -1.56
PRKCB-208ENST00000487674 SYCNQ0VAF6 134 aa5.31□□□□□ -1.56
PRKCB-208ENST00000487674 SS18Q15532 418 aa5.31□□□□□ -1.56
PRKCB-208ENST00000487674 CD164L2Q6UWJ8 174 aa5.31□□□□□ -1.56
PRKCB-208ENST00000487674 LINC00526Q96FQ7 95 aa5.31□□□□□ -1.56
PRKCB-208ENST00000487674 CDC42SE2Q9NRR3 84 aa5.31□□□□□ -1.56
PRKCB-208ENST00000487674 LRP2P98164 4655 aa5.31□□□□□ -1.56
PRKCB-208ENST00000487674 TRBV27A0A0K0K1C4 114 aa5.3□□□□□ -1.56
PRKCB-208ENST00000487674 A0A1B0GUT8 65 aa5.3□□□□□ -1.56
PRKCB-208ENST00000487674 C7orf77A4D0Y5 90 aa5.3□□□□□ -1.56
PRKCB-208ENST00000487674 GAS8-AS1O95177 125 aa5.3□□□□□ -1.56
PRKCB-208ENST00000487674 CAMPP49913 170 aa5.3□□□□□ -1.56
PRKCB-208ENST00000487674 PTTG1IPP53801 180 aa5.3□□□□□ -1.56
PRKCB-208ENST00000487674 Q6ZRP5 223 aa5.3□□□□□ -1.56
PRKCB-208ENST00000487674 ZNF664Q8N3J9 261 aa5.3□□□□□ -1.56
PRKCB-208ENST00000487674 ISOC2Q96AB3 205 aa5.3□□□□□ -1.56
PRKCB-208ENST00000487674 TMEM191AQ9H0A3 160 aa5.3□□□□□ -1.56
PRKCB-208ENST00000487674 LOC107984640A0A0U1RRK4 108 aa5.29□□□□□ -1.56
PRKCB-208ENST00000487674 HIGD1CA8MV81 97 aa5.29□□□□□ -1.56
PRKCB-208ENST00000487674 POLR2KP53803 58 aaKnown RBP5.29□□□□□ -1.56
PRKCB-208ENST00000487674 KRTAP10-8P60410 259 aa5.29□□□□□ -1.56
PRKCB-208ENST00000487674 TSKUQ8WUA8 353 aa5.29□□□□□ -1.56
PRKCB-208ENST00000487674 COX7A2LO14548 114 aa5.28□□□□□ -1.56
PRKCB-208ENST00000487674 RAB4AP20338 218 aa5.28□□□□□ -1.56
PRKCB-208ENST00000487674 MALP21145 153 aa5.28□□□□□ -1.56
PRKCB-208ENST00000487674 CEBPGP53567 150 aa5.28□□□□□ -1.56
PRKCB-208ENST00000487674 BLOC1S1P78537 153 aa5.28□□□□□ -1.56
PRKCB-208ENST00000487674 SMAGPQ0VAQ4 97 aa5.28□□□□□ -1.56
PRKCB-208ENST00000487674 SRSF9Q13242 221 aaKnown RBP eCLIP5.28□□□□□ -1.56
PRKCB-208ENST00000487674 ODF1Q14990 250 aa5.28□□□□□ -1.56
PRKCB-208ENST00000487674 AMN1Q8IY45 258 aa5.28□□□□□ -1.56
PRKCB-208ENST00000487674 SMIM7Q9BQ49 75 aa5.28□□□□□ -1.56
PRKCB-208ENST00000487674 CSDC2Q9Y534 153 aaKnown RBP5.28□□□□□ -1.56
PRKCB-208ENST00000487674 IGLV4-69A0A075B6H9 119 aa5.27□□□□□ -1.57
PRKCB-208ENST00000487674 C1orf196B1AJZ1 125 aa5.27□□□□□ -1.57
PRKCB-208ENST00000487674 VCYO14598 125 aa5.27□□□□□ -1.57
PRKCB-208ENST00000487674 APOMO95445 188 aa5.27□□□□□ -1.57
PRKCB-208ENST00000487674 PPP1R17O96001 155 aa5.27□□□□□ -1.57
PRKCB-208ENST00000487674 FCER1GP30273 86 aa5.27□□□□□ -1.57
PRKCB-208ENST00000487674 GAGE2BQ13066 116 aa5.27□□□□□ -1.57
PRKCB-208ENST00000487674 ALKAL2Q6UX46 152 aa5.27□□□□□ -1.57
PRKCB-208ENST00000487674 LINC01551Q86U37 167 aa5.27□□□□□ -1.57
PRKCB-208ENST00000487674 NUP35Q8NFH5 326 aa5.27□□□□□ -1.57
PRKCB-208ENST00000487674 CAMK2N2Q96S95 79 aa5.27□□□□□ -1.57
PRKCB-208ENST00000487674 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
PRKCB-208ENST00000487674 UBE2D4Q9Y2X8 147 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms