RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 KIR2DL4Q99706 377 aa7.7□□□□□ -1.18
HMGN1-213ENST00000482192 A0A1B0GXF2 115 aa7.69□□□□□ -1.18
HMGN1-213ENST00000482192 CKS2P33552 79 aa7.69□□□□□ -1.18
HMGN1-213ENST00000482192 CFAP161Q6P656 301 aa7.69□□□□□ -1.18
HMGN1-213ENST00000482192 LINC00528Q8N1L1 170 aa7.69□□□□□ -1.18
HMGN1-213ENST00000482192 C20orf78Q9BR46 151 aa7.69□□□□□ -1.18
HMGN1-213ENST00000482192 AP5S1Q9NUS5 200 aa7.69□□□□□ -1.18
HMGN1-213ENST00000482192 TRBV24-1A0A075B6N3 115 aa7.68□□□□□ -1.18
HMGN1-213ENST00000482192 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.68□□□□□ -1.18
HMGN1-213ENST00000482192 PLA2G1BP04054 148 aaKnown RBP7.68□□□□□ -1.18
HMGN1-213ENST00000482192 SMAGPQ0VAQ4 97 aa7.68□□□□□ -1.18
HMGN1-213ENST00000482192 CLLU1Q5K131 121 aa7.68□□□□□ -1.18
HMGN1-213ENST00000482192 ATP5L2Q7Z4Y8 100 aa7.68□□□□□ -1.18
HMGN1-213ENST00000482192 CIRBP-AS1Q8TBR5 109 aa7.68□□□□□ -1.18
HMGN1-213ENST00000482192 LINC00959A0A1B0GUT2 108 aa7.67□□□□□ -1.18
HMGN1-213ENST00000482192 PPBPP02775 128 aa7.67□□□□□ -1.18
HMGN1-213ENST00000482192 MT-ND4LP03901 98 aa7.67□□□□□ -1.18
HMGN1-213ENST00000482192 ZNF664Q8N3J9 261 aa7.67□□□□□ -1.18
HMGN1-213ENST00000482192 C15orf56Q8N910 161 aa7.67□□□□□ -1.18
HMGN1-213ENST00000482192 CDC42SE2Q9NRR3 84 aa7.67□□□□□ -1.18
HMGN1-213ENST00000482192 D6R8Y8 96 aa7.66□□□□□ -1.18
HMGN1-213ENST00000482192 TCAPO15273 167 aa7.66□□□□□ -1.18
HMGN1-213ENST00000482192 TNFRSF6BO95407 300 aa7.66□□□□□ -1.18
HMGN1-213ENST00000482192 XCL1P47992 114 aa7.66□□□□□ -1.18
HMGN1-213ENST00000482192 RPL32P62910 135 aaKnown RBP7.66□□□□□ -1.18
HMGN1-213ENST00000482192 FOXI1Q12951 378 aa7.66□□□□□ -1.18
HMGN1-213ENST00000482192 SS18Q15532 418 aa7.66□□□□□ -1.18
HMGN1-213ENST00000482192 ANAPC16Q96DE5 110 aa7.66□□□□□ -1.18
HMGN1-213ENST00000482192 CSDC2Q9Y534 153 aaKnown RBP7.66□□□□□ -1.18
HMGN1-213ENST00000482192 IGHV3-64A0A075B6Q5 118 aa7.65□□□□□ -1.18
HMGN1-213ENST00000482192 PHOX2AO14813 284 aa7.65□□□□□ -1.18
HMGN1-213ENST00000482192 CCL25O15444 150 aa7.65□□□□□ -1.18
HMGN1-213ENST00000482192 SDIM1Q6ZPB5 146 aa7.65□□□□□ -1.18
HMGN1-213ENST00000482192 TMEM18Q96B42 140 aa7.65□□□□□ -1.18
HMGN1-213ENST00000482192 SMIM2Q9BVW6 85 aa7.65□□□□□ -1.18
HMGN1-213ENST00000482192 UBE2D4Q9Y2X8 147 aa7.65□□□□□ -1.18
HMGN1-213ENST00000482192 GVQW2A0A096LPI5 108 aaPredicted RBP7.64□□□□□ -1.19
HMGN1-213ENST00000482192 SLPIP03973 132 aa7.64□□□□□ -1.19
HMGN1-213ENST00000482192 HIGD2BQ4VC39 106 aa7.64□□□□□ -1.19
HMGN1-213ENST00000482192 UQCC3Q6UW78 93 aa7.64□□□□□ -1.19
HMGN1-213ENST00000482192 ORMDL3Q8N138 153 aa7.64□□□□□ -1.19
HMGN1-213ENST00000482192 TIMM21Q9BVV7 248 aa7.64□□□□□ -1.19
HMGN1-213ENST00000482192 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.64□□□□□ -1.19
HMGN1-213ENST00000482192 NPYP01303 97 aa7.63□□□□□ -1.19
HMGN1-213ENST00000482192 CD164L2Q6UWJ8 174 aa7.63□□□□□ -1.19
HMGN1-213ENST00000482192 IGHV1-58A0A0C4DH39 117 aa7.62□□□□□ -1.19
HMGN1-213ENST00000482192 C1orf196B1AJZ1 125 aa7.62□□□□□ -1.19
HMGN1-213ENST00000482192 IFITM2Q01629 132 aa7.62□□□□□ -1.19
HMGN1-213ENST00000482192 TMEM136Q6ZRR5 245 aa7.62□□□□□ -1.19
HMGN1-213ENST00000482192 PRELID3AQ96N28 172 aa7.62□□□□□ -1.19
HMGN1-213ENST00000482192 PANO1I0J062 215 aa7.61□□□□□ -1.19
HMGN1-213ENST00000482192 CIRBPQ14011 172 aaKnown RBP7.61□□□□□ -1.19
HMGN1-213ENST00000482192 Q6ZUT4 128 aa7.61□□□□□ -1.19
HMGN1-213ENST00000482192 SPANXA1Q9NS26 97 aa7.61□□□□□ -1.19
HMGN1-213ENST00000482192 LAMTOR2Q9Y2Q5 125 aa7.61□□□□□ -1.19
HMGN1-213ENST00000482192 TMEM218A2RU14 115 aa7.6□□□□□ -1.19
HMGN1-213ENST00000482192 ADCYAP1P18509 176 aa7.6□□□□□ -1.19
HMGN1-213ENST00000482192 RAB5AP20339 215 aa7.6□□□□□ -1.19
HMGN1-213ENST00000482192 RPL39P62891 51 aaKnown RBP7.6□□□□□ -1.19
HMGN1-213ENST00000482192 RNASE13Q5GAN3 156 aaKnown RBP7.6□□□□□ -1.19
HMGN1-213ENST00000482192 IMMP2LQ96T52 175 aa7.6□□□□□ -1.19
HMGN1-213ENST00000482192 TRAV13-1A0A0B4J241 112 aa7.59□□□□□ -1.19
HMGN1-213ENST00000482192 COX7A2LO14548 114 aa7.59□□□□□ -1.19
HMGN1-213ENST00000482192 SPACA4Q8TDM5 124 aa7.59□□□□□ -1.19
HMGN1-213ENST00000482192 DPH3Q96FX2 82 aa7.59□□□□□ -1.19
HMGN1-213ENST00000482192 FAT1Q14517 4588 aa7.58□□□□□ -1.2
HMGN1-213ENST00000482192 PRSS47A8MTI9 375 aa7.58□□□□□ -1.2
HMGN1-213ENST00000482192 ZNF561-AS1K7EIQ3 104 aa7.58□□□□□ -1.2
HMGN1-213ENST00000482192 CHTF8P0CG12 524 aa7.58□□□□□ -1.2
HMGN1-213ENST00000482192 MALP21145 153 aa7.58□□□□□ -1.2
HMGN1-213ENST00000482192 KRTAP10-4P60372 401 aaPredicted RBP7.58□□□□□ -1.2
HMGN1-213ENST00000482192 COX6A2Q02221 97 aa7.58□□□□□ -1.2
HMGN1-213ENST00000482192 CTDSP1Q9GZU7 261 aa7.58□□□□□ -1.2
HMGN1-213ENST00000482192 MAP1LC3AQ9H492 121 aa7.58□□□□□ -1.2
HMGN1-213ENST00000482192 PKIGQ9Y2B9 76 aa7.58□□□□□ -1.2
HMGN1-213ENST00000482192 IFI27P40305 119 aaPredicted RBP7.57□□□□□ -1.2
HMGN1-213ENST00000482192 RPL37AP61513 92 aaKnown RBP7.57□□□□□ -1.2
HMGN1-213ENST00000482192 MRPS36P82909 103 aaKnown RBP7.57□□□□□ -1.2
HMGN1-213ENST00000482192 CARD19Q96LW7 228 aa7.57□□□□□ -1.2
HMGN1-213ENST00000482192 SEC11CQ9BY50 192 aa7.57□□□□□ -1.2
HMGN1-213ENST00000482192 TRAV9-1A0A075B6T8 112 aa7.56□□□□□ -1.2
HMGN1-213ENST00000482192 A0A087WYN8 130 aa7.56□□□□□ -1.2
HMGN1-213ENST00000482192 LOC389332A0A1B0GUA5 103 aa7.56□□□□□ -1.2
HMGN1-213ENST00000482192 SYCNQ0VAF6 134 aa7.56□□□□□ -1.2
HMGN1-213ENST00000482192 COMMD7Q86VX2 200 aa7.56□□□□□ -1.2
HMGN1-213ENST00000482192 PRSS3P2Q8NHM4 247 aa7.56□□□□□ -1.2
HMGN1-213ENST00000482192 FAM104AQ969W3 186 aa7.56□□□□□ -1.2
HMGN1-213ENST00000482192 LINC00526Q96FQ7 95 aa7.56□□□□□ -1.2
HMGN1-213ENST00000482192 IGKV2-24A0A0C4DH68 120 aa7.55□□□□□ -1.2
HMGN1-213ENST00000482192 IFITM10A6NMD0 228 aa7.55□□□□□ -1.2
HMGN1-213ENST00000482192 APOMO95445 188 aa7.55□□□□□ -1.2
HMGN1-213ENST00000482192 Q8N8P6 123 aa7.55□□□□□ -1.2
HMGN1-213ENST00000482192 OPRPNQ99935 248 aaPredicted RBP7.55□□□□□ -1.2
HMGN1-213ENST00000482192 PLAC8Q9NZF1 115 aa7.55□□□□□ -1.2
HMGN1-213ENST00000482192 PYGO1Q9Y3Y4 419 aa7.55□□□□□ -1.2
HMGN1-213ENST00000482192 SRRM2Q9UQ35 2752 aaKnown RBP7.55□□□□□ -1.2
HMGN1-213ENST00000482192 DNAH8Q96JB1 4490 aa7.54□□□□□ -1.2
HMGN1-213ENST00000482192 IGLV4-69A0A075B6H9 119 aa7.54□□□□□ -1.2
HMGN1-213ENST00000482192 K7EMI3 77 aa7.54□□□□□ -1.2
HMGN1-213ENST00000482192 S100PP25815 95 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms