RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 IGLV3-9A0A075B6K5 115 aa3.16□□□□□ -1.9
SSR1-207ENST00000479485 TRAV12-3A0A0B4J271 114 aa3.16□□□□□ -1.9
SSR1-207ENST00000479485 IGKV3D-7A0A0C4DH55 119 aa3.16□□□□□ -1.9
SSR1-207ENST00000479485 CRPP02741 224 aa3.16□□□□□ -1.9
SSR1-207ENST00000479485 TFF1P04155 84 aa3.16□□□□□ -1.9
SSR1-207ENST00000479485 CCKP06307 115 aa3.16□□□□□ -1.9
SSR1-207ENST00000479485 CD28P10747 220 aa3.16□□□□□ -1.9
SSR1-207ENST00000479485 PDE6GP18545 87 aa3.16□□□□□ -1.9
SSR1-207ENST00000479485 RPL28P46779 137 aaKnown RBP3.16□□□□□ -1.9
SSR1-207ENST00000479485 LINC01561Q8N1V8 128 aa3.16□□□□□ -1.9
SSR1-207ENST00000479485 C20orf203Q8NBC4 194 aa3.16□□□□□ -1.9
SSR1-207ENST00000479485 WFDC11Q8NEX6 87 aa3.16□□□□□ -1.9
SSR1-207ENST00000479485 RAI1Q7Z5J4 1906 aaPredicted RBP3.16□□□□□ -1.9
SSR1-207ENST00000479485 SEC16AO15027 2179 aa3.15□□□□□ -1.9
SSR1-207ENST00000479485 IGLV11-55A0A075B6I3 123 aa3.15□□□□□ -1.91
SSR1-207ENST00000479485 LOXP28300 417 aaPredicted RBP3.15□□□□□ -1.91
SSR1-207ENST00000479485 NBL1P41271 181 aa3.15□□□□□ -1.91
SSR1-207ENST00000479485 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
SSR1-207ENST00000479485 LYPD5Q6UWN5 251 aa3.15□□□□□ -1.91
SSR1-207ENST00000479485 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.15□□□□□ -1.91
SSR1-207ENST00000479485 FAM19A1Q7Z5A9 133 aa3.15□□□□□ -1.91
SSR1-207ENST00000479485 FAM223AQ8IWN6 122 aa3.15□□□□□ -1.91
SSR1-207ENST00000479485 LINC00308Q8TCZ7 52 aa3.15□□□□□ -1.91
SSR1-207ENST00000479485 CYSTM1Q9H1C7 97 aa3.15□□□□□ -1.91
SSR1-207ENST00000479485 ORMDL1Q9P0S3 153 aa3.15□□□□□ -1.91
SSR1-207ENST00000479485 CACNA1DQ01668 2161 aa3.14□□□□□ -1.91
SSR1-207ENST00000479485 A0A0J9YXV3 536 aa3.14□□□□□ -1.91
SSR1-207ENST00000479485 PINLYPA6NC86 204 aa3.14□□□□□ -1.91
SSR1-207ENST00000479485 IBA57-AS1B1ANH7 110 aa3.14□□□□□ -1.91
SSR1-207ENST00000479485 F6UB75 175 aa3.14□□□□□ -1.91
SSR1-207ENST00000479485 TRBV12-3P01733 135 aa3.14□□□□□ -1.91
SSR1-207ENST00000479485 IGHV1-8P0DP01 117 aa3.14□□□□□ -1.91
SSR1-207ENST00000479485 RPL39P62891 51 aaKnown RBP3.14□□□□□ -1.91
SSR1-207ENST00000479485 C9orf129Q5T035 196 aaKnown RBP3.14□□□□□ -1.91
SSR1-207ENST00000479485 FP248Q71RG6 208 aaPredicted RBP3.14□□□□□ -1.91
SSR1-207ENST00000479485 NPBQ8NG41 125 aa3.14□□□□□ -1.91
SSR1-207ENST00000479485 LINC00846Q9NV44 126 aa3.14□□□□□ -1.91
SSR1-207ENST00000479485 KAAG1Q9UBP8 84 aa3.14□□□□□ -1.91
SSR1-207ENST00000479485 PCNX2A6NKB5 2137 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 IGLV8-61A0A075B6I0 122 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 IGHV3-64A0A075B6Q5 118 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 TRAV23DV6A0A075B6W5 121 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 F8WEM9 126 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 BUB1B-PAK6H3BSN5 160 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 TMEM256-PLSCR3K7ERE1 68 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 IGHV1-46P01743 117 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 MIFP14174 115 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 SNRPD3P62318 126 aaKnown RBP3.13□□□□□ -1.91
SSR1-207ENST00000479485 ESRGQ1W209 222 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 KLK9Q2XQG4 91 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 VMO1Q7Z5L0 202 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 DEFB108BQ8NET1 73 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 C14orf132Q9NPU4 83 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 KLK9Q9UKQ9 250 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 CELA1Q9UNI1 258 aa3.13□□□□□ -1.91
SSR1-207ENST00000479485 KNTC1P50748 2209 aa3.12□□□□□ -1.91
SSR1-207ENST00000479485 MYO7AQ13402 2215 aa3.12□□□□□ -1.91
SSR1-207ENST00000479485 A0A087WVE0 104 aa3.12□□□□□ -1.91
SSR1-207ENST00000479485 EPOPA6NHQ4 379 aa3.12□□□□□ -1.91
SSR1-207ENST00000479485 IGLV1-47P01700 117 aa3.12□□□□□ -1.91
SSR1-207ENST00000479485 CTSGP08311 255 aa3.12□□□□□ -1.91
SSR1-207ENST00000479485 CCL3L1P16619 93 aa3.12□□□□□ -1.91
SSR1-207ENST00000479485 LINC00315P59091 139 aa3.12□□□□□ -1.91
SSR1-207ENST00000479485 CNEP1R1Q8N9A8 125 aa3.12□□□□□ -1.91
SSR1-207ENST00000479485 RNASE6Q93091 150 aaKnown RBP3.12□□□□□ -1.91
SSR1-207ENST00000479485 RETNQ9HD89 108 aa3.12□□□□□ -1.91
SSR1-207ENST00000479485 CABIN1Q9Y6J0 2220 aa3.12□□□□□ -1.91
SSR1-207ENST00000479485 TNCP24821 2201 aa3.11□□□□□ -1.91
SSR1-207ENST00000479485 M0QY20 66 aa3.11□□□□□ -1.91
SSR1-207ENST00000479485 M0R1B8 84 aa3.11□□□□□ -1.91
SSR1-207ENST00000479485 NDUFS5O43920 106 aa3.11□□□□□ -1.91
SSR1-207ENST00000479485 APELAP0DMC3 54 aa3.11□□□□□ -1.91
SSR1-207ENST00000479485 RNASE3P12724 160 aaKnown RBP3.11□□□□□ -1.91
SSR1-207ENST00000479485 DAD1P61803 113 aa3.11□□□□□ -1.91
SSR1-207ENST00000479485 UBE2BP63146 152 aa3.11□□□□□ -1.91
SSR1-207ENST00000479485 ENHOQ6UWT2 76 aa3.11□□□□□ -1.91
SSR1-207ENST00000479485 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
SSR1-207ENST00000479485 Q8N2B8 174 aa3.11□□□□□ -1.91
SSR1-207ENST00000479485 ZFAND2AQ8N6M9 145 aa3.11□□□□□ -1.91
SSR1-207ENST00000479485 MDS2Q8NDY4 140 aa3.11□□□□□ -1.91
SSR1-207ENST00000479485 ITLN2Q8WWU7 325 aaPredicted RBP3.11□□□□□ -1.91
SSR1-207ENST00000479485 HES7Q9BYE0 225 aa3.11□□□□□ -1.91
SSR1-207ENST00000479485 ZNRD1Q9P1U0 126 aa3.11□□□□□ -1.91
SSR1-207ENST00000479485 SPRR3Q9UBC9 169 aa3.11□□□□□ -1.91
SSR1-207ENST00000479485 IGHV3-72A0A0B4J1Y9 119 aa3.1□□□□□ -1.91
SSR1-207ENST00000479485 FUSP35637 526 aaKnown RBP eCLIP3.1□□□□□ -1.91
SSR1-207ENST00000479485 Q1T7F1 81 aa3.1□□□□□ -1.91
SSR1-207ENST00000479485 FAM19A3Q7Z5A8 133 aa3.1□□□□□ -1.91
SSR1-207ENST00000479485 C22orf24Q9Y442 160 aa3.1□□□□□ -1.91
SSR1-207ENST00000479485 LOC110117498A0A087WWA1 95 aa3.09□□□□□ -1.91
SSR1-207ENST00000479485 UBE2L6O14933 153 aa3.09□□□□□ -1.91
SSR1-207ENST00000479485 CCL5P13501 91 aa3.09□□□□□ -1.91
SSR1-207ENST00000479485 DEFB119Q8N690 84 aa3.09□□□□□ -1.91
SSR1-207ENST00000479485 LINC01006Q8NI28 216 aa3.09□□□□□ -1.91
SSR1-207ENST00000479485 TMEM254Q8TBM7 123 aa3.09□□□□□ -1.91
SSR1-207ENST00000479485 LINC00167Q96N53 147 aa3.09□□□□□ -1.91
SSR1-207ENST00000479485 DEFB127Q9H1M4 99 aa3.09□□□□□ -1.91
SSR1-207ENST00000479485 INTS1Q8N201 2190 aaKnown RBP3.09□□□□□ -1.91
SSR1-207ENST00000479485 MED12Q93074 2177 aa3.09□□□□□ -1.91
SSR1-207ENST00000479485 PDE4DIPQ5VU43 2346 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 270.5 ms