RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 TSHBP01222 138 aa5.37□□□□□ -1.55
ERCC8-205ENST00000477893 FGF6P10767 208 aa5.37□□□□□ -1.55
ERCC8-205ENST00000477893 RAB4AP20338 218 aa5.37□□□□□ -1.55
ERCC8-205ENST00000477893 CAMPP49913 170 aa5.37□□□□□ -1.55
ERCC8-205ENST00000477893 HIGD2BQ4VC39 106 aa5.37□□□□□ -1.55
ERCC8-205ENST00000477893 FAM74A3Q4VXF1 159 aa5.37□□□□□ -1.55
ERCC8-205ENST00000477893 CIRBP-AS1Q8TBR5 109 aa5.37□□□□□ -1.55
ERCC8-205ENST00000477893 TMEM191AQ9H0A3 160 aa5.37□□□□□ -1.55
ERCC8-205ENST00000477893 NAT8BQ9UHF3 227 aa5.37□□□□□ -1.55
ERCC8-205ENST00000477893 TRAV8-4A0A0B4J246 113 aa5.36□□□□□ -1.55
ERCC8-205ENST00000477893 NDUFS6O75380 124 aaKnown RBP5.36□□□□□ -1.55
ERCC8-205ENST00000477893 FCER1GP30273 86 aa5.36□□□□□ -1.55
ERCC8-205ENST00000477893 MRPL54Q6P161 138 aaKnown RBP5.36□□□□□ -1.55
ERCC8-205ENST00000477893 MRAP2Q96G30 205 aa5.36□□□□□ -1.55
ERCC8-205ENST00000477893 TMEM101Q96IK0 257 aa5.36□□□□□ -1.55
ERCC8-205ENST00000477893 BTF3L4Q96K17 158 aa5.36□□□□□ -1.55
ERCC8-205ENST00000477893 CHAC1Q9BUX1 264 aa5.36□□□□□ -1.55
ERCC8-205ENST00000477893 FLG2Q5D862 2391 aaPredicted RBP5.35□□□□□ -1.55
ERCC8-205ENST00000477893 TRBV6-5A0A0K0K1A5 114 aa5.35□□□□□ -1.55
ERCC8-205ENST00000477893 FAM231BA6NCW3 169 aa5.35□□□□□ -1.55
ERCC8-205ENST00000477893 PLA2G1BP04054 148 aaKnown RBP5.35□□□□□ -1.55
ERCC8-205ENST00000477893 XCL1P47992 114 aa5.35□□□□□ -1.55
ERCC8-205ENST00000477893 MRPL51Q4U2R6 128 aaKnown RBP5.35□□□□□ -1.55
ERCC8-205ENST00000477893 OR5A1Q8NGJ0 315 aa5.35□□□□□ -1.55
ERCC8-205ENST00000477893 CHCHD10Q8WYQ3 142 aaPredicted RBP5.35□□□□□ -1.55
ERCC8-205ENST00000477893 AP5S1Q9NUS5 200 aa5.35□□□□□ -1.55
ERCC8-205ENST00000477893 DMBT1Q9UGM3 2413 aaPredicted RBP5.35□□□□□ -1.55
ERCC8-205ENST00000477893 SMIM27A0A1W2PRY6 76 aa5.34□□□□□ -1.55
ERCC8-205ENST00000477893 C7orf77A4D0Y5 90 aa5.34□□□□□ -1.55
ERCC8-205ENST00000477893 PANO1I0J062 215 aa5.34□□□□□ -1.55
ERCC8-205ENST00000477893 RNASE13Q5GAN3 156 aaKnown RBP5.34□□□□□ -1.55
ERCC8-205ENST00000477893 C15orf56Q8N910 161 aa5.34□□□□□ -1.55
ERCC8-205ENST00000477893 NRACQ8N912 160 aa5.34□□□□□ -1.55
ERCC8-205ENST00000477893 H7C423 109 aa5.33□□□□□ -1.56
ERCC8-205ENST00000477893 CCL25O15444 150 aa5.33□□□□□ -1.56
ERCC8-205ENST00000477893 CHTF8P0CG12 524 aa5.33□□□□□ -1.56
ERCC8-205ENST00000477893 ZNF25P17030 456 aaPredicted RBP5.33□□□□□ -1.56
ERCC8-205ENST00000477893 CKS2P33552 79 aa5.33□□□□□ -1.56
ERCC8-205ENST00000477893 POLR2KP53803 58 aaKnown RBP5.33□□□□□ -1.56
ERCC8-205ENST00000477893 RAB14P61106 215 aa5.33□□□□□ -1.56
ERCC8-205ENST00000477893 SUMO2P61956 95 aaKnown RBP5.33□□□□□ -1.56
ERCC8-205ENST00000477893 FAM104BQ5XKR9 115 aa5.33□□□□□ -1.56
ERCC8-205ENST00000477893 DGAT2L7PQ6IED9 249 aa5.33□□□□□ -1.56
ERCC8-205ENST00000477893 C9orf163Q8N9P6 203 aa5.33□□□□□ -1.56
ERCC8-205ENST00000477893 CLRN3Q8NCR9 226 aa5.33□□□□□ -1.56
ERCC8-205ENST00000477893 DPH3Q96FX2 82 aa5.33□□□□□ -1.56
ERCC8-205ENST00000477893 IGHV3-64A0A075B6Q5 118 aa5.32□□□□□ -1.56
ERCC8-205ENST00000477893 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.32□□□□□ -1.56
ERCC8-205ENST00000477893 TRBV27A0A0K0K1C4 114 aa5.32□□□□□ -1.56
ERCC8-205ENST00000477893 D6R8Y8 96 aa5.32□□□□□ -1.56
ERCC8-205ENST00000477893 VCYO14598 125 aa5.32□□□□□ -1.56
ERCC8-205ENST00000477893 SLPIP03973 132 aa5.32□□□□□ -1.56
ERCC8-205ENST00000477893 ESDP10768 282 aa5.32□□□□□ -1.56
ERCC8-205ENST00000477893 CNBPP62633 177 aaKnown RBP5.32□□□□□ -1.56
ERCC8-205ENST00000477893 HBBP68871 147 aa5.32□□□□□ -1.56
ERCC8-205ENST00000477893 FOXI1Q12951 378 aa5.32□□□□□ -1.56
ERCC8-205ENST00000477893 CFAP161Q6P656 301 aa5.32□□□□□ -1.56
ERCC8-205ENST00000477893 LINC00526Q96FQ7 95 aa5.32□□□□□ -1.56
ERCC8-205ENST00000477893 KIR2DL4Q99706 377 aa5.32□□□□□ -1.56
ERCC8-205ENST00000477893 SMDT1Q9H4I9 107 aa5.32□□□□□ -1.56
ERCC8-205ENST00000477893 IGKV2-24A0A0C4DH68 120 aa5.31□□□□□ -1.56
ERCC8-205ENST00000477893 LINC00959A0A1B0GUT2 108 aa5.31□□□□□ -1.56
ERCC8-205ENST00000477893 PPP1R17O96001 155 aa5.31□□□□□ -1.56
ERCC8-205ENST00000477893 RPL37AP61513 92 aaKnown RBP5.31□□□□□ -1.56
ERCC8-205ENST00000477893 SS18Q15532 418 aa5.31□□□□□ -1.56
ERCC8-205ENST00000477893 Q6ZUT4 128 aa5.31□□□□□ -1.56
ERCC8-205ENST00000477893 ZNF664Q8N3J9 261 aa5.31□□□□□ -1.56
ERCC8-205ENST00000477893 TRAV13-1A0A0B4J241 112 aa5.3□□□□□ -1.56
ERCC8-205ENST00000477893 A0A1B0GW15 77 aa5.3□□□□□ -1.56
ERCC8-205ENST00000477893 A0A1B0GXF2 115 aa5.3□□□□□ -1.56
ERCC8-205ENST00000477893 F8W036 122 aa5.3□□□□□ -1.56
ERCC8-205ENST00000477893 PPP1R2P9O14990 202 aa5.3□□□□□ -1.56
ERCC8-205ENST00000477893 TCAPO15273 167 aa5.3□□□□□ -1.56
ERCC8-205ENST00000477893 TNFRSF6BO95407 300 aa5.3□□□□□ -1.56
ERCC8-205ENST00000477893 NPYP01303 97 aa5.3□□□□□ -1.56
ERCC8-205ENST00000477893 S100A8P05109 93 aa5.3□□□□□ -1.56
ERCC8-205ENST00000477893 RPL39P62891 51 aaKnown RBP5.3□□□□□ -1.56
ERCC8-205ENST00000477893 SDIM1Q6ZPB5 146 aa5.3□□□□□ -1.56
ERCC8-205ENST00000477893 MRPL52Q86TS9 123 aaKnown RBP5.3□□□□□ -1.56
ERCC8-205ENST00000477893 CDC42SE2Q9NRR3 84 aa5.3□□□□□ -1.56
ERCC8-205ENST00000477893 LRP1Q07954 4544 aaKnown RBP5.29□□□□□ -1.56
ERCC8-205ENST00000477893 GVQW2A0A096LPI5 108 aaPredicted RBP5.29□□□□□ -1.56
ERCC8-205ENST00000477893 COX6A2Q02221 97 aa5.29□□□□□ -1.56
ERCC8-205ENST00000477893 SMIM2Q9BVW6 85 aa5.29□□□□□ -1.56
ERCC8-205ENST00000477893 UBE2D4Q9Y2X8 147 aa5.29□□□□□ -1.56
ERCC8-205ENST00000477893 IGHV1-58A0A0C4DH39 117 aa5.28□□□□□ -1.56
ERCC8-205ENST00000477893 LOC389332A0A1B0GUA5 103 aa5.28□□□□□ -1.56
ERCC8-205ENST00000477893 LINC00862A6NCI5 91 aa5.28□□□□□ -1.56
ERCC8-205ENST00000477893 MALP21145 153 aa5.28□□□□□ -1.56
ERCC8-205ENST00000477893 KRTAP10-4P60372 401 aaPredicted RBP5.28□□□□□ -1.56
ERCC8-205ENST00000477893 MAJINQ3KP22 176 aa5.28□□□□□ -1.56
ERCC8-205ENST00000477893 ORMDL3Q8N138 153 aa5.28□□□□□ -1.56
ERCC8-205ENST00000477893 PRSS3P2Q8NHM4 247 aa5.28□□□□□ -1.56
ERCC8-205ENST00000477893 SPACA4Q8TDM5 124 aa5.28□□□□□ -1.56
ERCC8-205ENST00000477893 PRELID3AQ96N28 172 aa5.28□□□□□ -1.56
ERCC8-205ENST00000477893 OPRPNQ99935 248 aaPredicted RBP5.28□□□□□ -1.56
ERCC8-205ENST00000477893 C20orf78Q9BR46 151 aa5.28□□□□□ -1.56
ERCC8-205ENST00000477893 FAT3Q8TDW7 4589 aa5.28□□□□□ -1.56
ERCC8-205ENST00000477893 A0A087WYN8 130 aa5.27□□□□□ -1.57
ERCC8-205ENST00000477893 ZNF561-AS1K7EIQ3 104 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms