RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 A0A1B0GVY2 172 aa10.54□□□□□ -0.72
COPS3-207ENST00000477299 CRPP02741 224 aa10.54□□□□□ -0.72
COPS3-207ENST00000477299 BTF3P20290 206 aaKnown RBP10.54□□□□□ -0.72
COPS3-207ENST00000477299 Q6ZUT4 128 aa10.54□□□□□ -0.72
COPS3-207ENST00000477299 NFE4Q86UQ8 179 aa10.54□□□□□ -0.72
COPS3-207ENST00000477299 OR5A1Q8NGJ0 315 aa10.54□□□□□ -0.72
COPS3-207ENST00000477299 LINC01546A6NGU7 62 aa10.53□□□□□ -0.72
COPS3-207ENST00000477299 ZC2HC1BQ5TFG8 222 aa10.53□□□□□ -0.72
COPS3-207ENST00000477299 C2orf66Q6UXQ4 117 aa10.53□□□□□ -0.72
COPS3-207ENST00000477299 ZNF664Q8N3J9 261 aa10.53□□□□□ -0.72
COPS3-207ENST00000477299 TMEM101Q96IK0 257 aa10.53□□□□□ -0.72
COPS3-207ENST00000477299 LRCOL1A6NCL2 159 aa10.52□□□□□ -0.73
COPS3-207ENST00000477299 LECT2O14960 151 aa10.52□□□□□ -0.73
COPS3-207ENST00000477299 ZNF25P17030 456 aaPredicted RBP10.52□□□□□ -0.73
COPS3-207ENST00000477299 Q0VG73 95 aa10.52□□□□□ -0.73
COPS3-207ENST00000477299 DGAT2L7PQ6IED9 249 aa10.52□□□□□ -0.73
COPS3-207ENST00000477299 LINC00336Q6ZUF6 198 aa10.52□□□□□ -0.73
COPS3-207ENST00000477299 BAALCQ8WXS3 180 aa10.52□□□□□ -0.73
COPS3-207ENST00000477299 PSCAO43653 123 aa10.51□□□□□ -0.73
COPS3-207ENST00000477299 MIAQ16674 131 aa10.51□□□□□ -0.73
COPS3-207ENST00000477299 ORMDL2Q53FV1 153 aa10.51□□□□□ -0.73
COPS3-207ENST00000477299 TIMM21Q9BVV7 248 aa10.51□□□□□ -0.73
COPS3-207ENST00000477299 A0A087WTM6 91 aa10.5□□□□□ -0.73
COPS3-207ENST00000477299 PMCHL1Q16048 86 aa10.5□□□□□ -0.73
COPS3-207ENST00000477299 FA2HQ7L5A8 372 aa10.5□□□□□ -0.73
COPS3-207ENST00000477299 TMEM18Q96B42 140 aa10.5□□□□□ -0.73
COPS3-207ENST00000477299 C1orf43Q9BWL3 253 aa10.5□□□□□ -0.73
COPS3-207ENST00000477299 CSDC2Q9Y534 153 aaKnown RBP10.5□□□□□ -0.73
COPS3-207ENST00000477299 A0A096LNJ9 63 aa10.49□□□□□ -0.73
COPS3-207ENST00000477299 LINC00959A0A1B0GUT2 108 aa10.49□□□□□ -0.73
COPS3-207ENST00000477299 LINC00614P0C842 121 aa10.49□□□□□ -0.73
COPS3-207ENST00000477299 TM2D2Q9BX73 214 aa10.49□□□□□ -0.73
COPS3-207ENST00000477299 SPANXA1Q9NS26 97 aa10.49□□□□□ -0.73
COPS3-207ENST00000477299 CYSLTR1Q9Y271 337 aa10.49□□□□□ -0.73
COPS3-207ENST00000477299 IGLV4-3A0A075B6K6 122 aa10.48□□□□□ -0.73
COPS3-207ENST00000477299 IGIPA6NJ69 53 aa10.48□□□□□ -0.73
COPS3-207ENST00000477299 K7EMI3 77 aa10.48□□□□□ -0.73
COPS3-207ENST00000477299 KRTAP10-2P60368 255 aa10.48□□□□□ -0.73
COPS3-207ENST00000477299 TOMM6Q96B49 74 aa10.48□□□□□ -0.73
COPS3-207ENST00000477299 RMI2Q96E14 147 aa10.48□□□□□ -0.73
COPS3-207ENST00000477299 GAGE12HA6NDE8 117 aa10.47□□□□□ -0.73
COPS3-207ENST00000477299 NUPR1O60356 82 aa10.47□□□□□ -0.73
COPS3-207ENST00000477299 LINC00310P59036 64 aa10.47□□□□□ -0.73
COPS3-207ENST00000477299 CHCHD10Q8WYQ3 142 aaPredicted RBP10.47□□□□□ -0.73
COPS3-207ENST00000477299 PYGO1Q9Y3Y4 419 aa10.47□□□□□ -0.73
COPS3-207ENST00000477299 HECTD4Q9Y4D8 3996 aa10.47□□□□□ -0.73
COPS3-207ENST00000477299 TRAV13-1A0A0B4J241 112 aa10.46□□□□□ -0.73
COPS3-207ENST00000477299 MRPS36P82909 103 aaKnown RBP10.46□□□□□ -0.73
COPS3-207ENST00000477299 LINC00173Q6ZV60 143 aa10.46□□□□□ -0.73
COPS3-207ENST00000477299 AP5S1Q9NUS5 200 aa10.46□□□□□ -0.73
COPS3-207ENST00000477299 TRAV8-4A0A0B4J246 113 aa10.45□□□□□ -0.74
COPS3-207ENST00000477299 CCL25O15444 150 aa10.45□□□□□ -0.74
COPS3-207ENST00000477299 XCL1P47992 114 aa10.45□□□□□ -0.74
COPS3-207ENST00000477299 DNAH5Q8TE73 4624 aa10.44□□□□□ -0.74
COPS3-207ENST00000477299 SMAGPQ0VAQ4 97 aa10.44□□□□□ -0.74
COPS3-207ENST00000477299 FOXI1Q12951 378 aa10.44□□□□□ -0.74
COPS3-207ENST00000477299 SPATA12Q7Z6I5 190 aa10.44□□□□□ -0.74
COPS3-207ENST00000477299 BAGE3Q86Y29 109 aa10.44□□□□□ -0.74
COPS3-207ENST00000477299 SCGB3A1Q96QR1 104 aa10.44□□□□□ -0.74
COPS3-207ENST00000477299 COX11Q9Y6N1 276 aa10.44□□□□□ -0.74
COPS3-207ENST00000477299 FAM19A2Q8N3H0 131 aa10.43□□□□□ -0.74
COPS3-207ENST00000477299 TMEM141Q96I45 108 aa10.43□□□□□ -0.74
COPS3-207ENST00000477299 AMELXQ99217 191 aa10.43□□□□□ -0.74
COPS3-207ENST00000477299 USP17L23D6RBM5 183 aa10.42□□□□□ -0.74
COPS3-207ENST00000477299 HIST1H2BKO60814 126 aa10.42□□□□□ -0.74
COPS3-207ENST00000477299 SERF1AO75920 110 aa10.42□□□□□ -0.74
COPS3-207ENST00000477299 HIST1H2BJP06899 126 aa10.42□□□□□ -0.74
COPS3-207ENST00000477299 HIST1H2BOP23527 126 aa10.42□□□□□ -0.74
COPS3-207ENST00000477299 HIST1H2BBP33778 126 aa10.42□□□□□ -0.74
COPS3-207ENST00000477299 HIST1H2BDP58876 126 aa10.42□□□□□ -0.74
COPS3-207ENST00000477299 RAB5BP61020 215 aa10.42□□□□□ -0.74
COPS3-207ENST00000477299 HIST1H2BCP62807 126 aa10.42□□□□□ -0.74
COPS3-207ENST00000477299 SS18Q15532 418 aa10.42□□□□□ -0.74
COPS3-207ENST00000477299 HIST2H2BEQ16778 126 aa10.42□□□□□ -0.74
COPS3-207ENST00000477299 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.42□□□□□ -0.74
COPS3-207ENST00000477299 ERASQ7Z444 233 aa10.42□□□□□ -0.74
COPS3-207ENST00000477299 HIST1H2BHQ93079 126 aa10.42□□□□□ -0.74
COPS3-207ENST00000477299 HIST1H2BNQ99877 126 aa10.42□□□□□ -0.74
COPS3-207ENST00000477299 HIST1H2BMQ99879 126 aa10.42□□□□□ -0.74
COPS3-207ENST00000477299 IFITM10A6NMD0 228 aa10.41□□□□□ -0.74
COPS3-207ENST00000477299 COX6A2Q02221 97 aa10.41□□□□□ -0.74
COPS3-207ENST00000477299 PDZD11Q5EBL8 140 aa10.41□□□□□ -0.74
COPS3-207ENST00000477299 Q8N814 137 aa10.41□□□□□ -0.74
COPS3-207ENST00000477299 TIMM17AQ99595 171 aa10.41□□□□□ -0.74
COPS3-207ENST00000477299 PKHD1P08F94 4074 aa10.41□□□□□ -0.74
COPS3-207ENST00000477299 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.4□□□□□ -0.74
COPS3-207ENST00000477299 C1orf196B1AJZ1 125 aa10.4□□□□□ -0.74
COPS3-207ENST00000477299 HBDP02042 147 aa10.4□□□□□ -0.74
COPS3-207ENST00000477299 NTN5Q8WTR8 489 aaPredicted RBP10.4□□□□□ -0.74
COPS3-207ENST00000477299 CHCHD1Q96BP2 118 aaKnown RBP10.4□□□□□ -0.74
COPS3-207ENST00000477299 VCX2Q9H322 139 aa10.4□□□□□ -0.74
COPS3-207ENST00000477299 DYNC1H1Q14204 4646 aaKnown RBP10.4□□□□□ -0.74
COPS3-207ENST00000477299 PRSS1P07477 247 aa10.39□□□□□ -0.75
COPS3-207ENST00000477299 G0S2P27469 103 aa10.39□□□□□ -0.75
COPS3-207ENST00000477299 UBE2D1P51668 147 aa10.39□□□□□ -0.75
COPS3-207ENST00000477299 LINC00242Q5T6M2 205 aa10.39□□□□□ -0.75
COPS3-207ENST00000477299 CD164L2Q6UWJ8 174 aa10.39□□□□□ -0.75
COPS3-207ENST00000477299 TEX43Q6ZNM6 134 aa10.39□□□□□ -0.75
COPS3-207ENST00000477299 C5orf38Q86SI9 138 aa10.39□□□□□ -0.75
COPS3-207ENST00000477299 C15orf56Q8N910 161 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms