RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 VCX2Q9H322 139 aa19.93■□□□□ 0.78
VEGFA-211ENST00000476772 F8VRH5 84 aa19.92■□□□□ 0.78
VEGFA-211ENST00000476772 MAJINQ3KP22 176 aa19.92■□□□□ 0.78
VEGFA-211ENST00000476772 AMMECR1LQ6DCA0 310 aa19.92■□□□□ 0.78
VEGFA-211ENST00000476772 VAMP8Q9BV40 100 aa19.92■□□□□ 0.78
VEGFA-211ENST00000476772 MRPS36P82909 103 aaKnown RBP19.91■□□□□ 0.78
VEGFA-211ENST00000476772 SMAGPQ0VAQ4 97 aa19.91■□□□□ 0.78
VEGFA-211ENST00000476772 AMELXQ99217 191 aa19.91■□□□□ 0.78
VEGFA-211ENST00000476772 CSDC2Q9Y534 153 aaKnown RBP19.91■□□□□ 0.78
VEGFA-211ENST00000476772 PAM16Q9Y3D7 125 aa19.9■□□□□ 0.78
VEGFA-211ENST00000476772 DPM2O94777 84 aa19.89■□□□□ 0.77
VEGFA-211ENST00000476772 IGKCP01834 107 aa19.89■□□□□ 0.77
VEGFA-211ENST00000476772 OR5A1Q8NGJ0 315 aa19.89■□□□□ 0.77
VEGFA-211ENST00000476772 TRAV9-2A0A087WT02 112 aa19.88■□□□□ 0.77
VEGFA-211ENST00000476772 hDV102S1A0JD36 115 aa19.88■□□□□ 0.77
VEGFA-211ENST00000476772 LYPD5Q6UWN5 251 aa19.88■□□□□ 0.77
VEGFA-211ENST00000476772 LELP1Q5T871 98 aa19.87■□□□□ 0.77
VEGFA-211ENST00000476772 TMEM101Q96IK0 257 aa19.87■□□□□ 0.77
VEGFA-211ENST00000476772 ZNF25P17030 456 aaPredicted RBP19.87■□□□□ 0.77
VEGFA-211ENST00000476772 ZNF664Q8N3J9 261 aa19.87■□□□□ 0.77
VEGFA-211ENST00000476772 IGLV4-69A0A075B6H9 119 aa19.86■□□□□ 0.77
VEGFA-211ENST00000476772 CDC42SE2Q9NRR3 84 aa19.86■□□□□ 0.77
VEGFA-211ENST00000476772 PLNP26678 52 aa19.85■□□□□ 0.77
VEGFA-211ENST00000476772 STAB2Q8WWQ8 2551 aa19.85■□□□□ 0.77
VEGFA-211ENST00000476772 TMEM262E9PQX1 116 aa19.84■□□□□ 0.77
VEGFA-211ENST00000476772 IGLV4-60A0A075B6I1 120 aa19.84■□□□□ 0.77
VEGFA-211ENST00000476772 TIRAPP58753 221 aa19.84■□□□□ 0.77
VEGFA-211ENST00000476772 SPATA45Q537H7 98 aa19.84■□□□□ 0.77
VEGFA-211ENST00000476772 MPV17L2Q567V2 206 aa19.82■□□□□ 0.76
VEGFA-211ENST00000476772 C15orf53Q8NAA6 179 aa19.82■□□□□ 0.76
VEGFA-211ENST00000476772 C2orf88Q9BSF0 95 aa19.82■□□□□ 0.76
VEGFA-211ENST00000476772 C11orf86A6NJI1 115 aa19.81■□□□□ 0.76
VEGFA-211ENST00000476772 HSBP1L1C9JCN9 74 aa19.81■□□□□ 0.76
VEGFA-211ENST00000476772 STPG4Q8N801 248 aa19.81■□□□□ 0.76
VEGFA-211ENST00000476772 IGLL5B9A064 214 aa19.8■□□□□ 0.76
VEGFA-211ENST00000476772 RBX1P62877 108 aa19.8■□□□□ 0.76
VEGFA-211ENST00000476772 PRO1933Q9H354 126 aa19.8■□□□□ 0.76
VEGFA-211ENST00000476772 A0A0J9YXV3 536 aa19.79■□□□□ 0.76
VEGFA-211ENST00000476772 ESRGQ1W209 222 aa19.79■□□□□ 0.76
VEGFA-211ENST00000476772 A0A1B0GUV1 79 aa19.78■□□□□ 0.76
VEGFA-211ENST00000476772 IGLC3P0DOY3 106 aa19.78■□□□□ 0.76
VEGFA-211ENST00000476772 UBE2D1P51668 147 aa19.78■□□□□ 0.76
VEGFA-211ENST00000476772 NFE4Q86UQ8 179 aa19.78■□□□□ 0.76
VEGFA-211ENST00000476772 CHAC1Q9BUX1 264 aa19.78■□□□□ 0.76
VEGFA-211ENST00000476772 ANKRD39Q53RE8 183 aa19.77■□□□□ 0.76
VEGFA-211ENST00000476772 Q8N3U1 123 aa19.77■□□□□ 0.76
VEGFA-211ENST00000476772 TCTAP57738 103 aa19.76■□□□□ 0.75
VEGFA-211ENST00000476772 TRAV8-6A0A0B4J262 113 aa19.75■□□□□ 0.75
VEGFA-211ENST00000476772 TRAV13-1A0A0B4J241 112 aa19.74■□□□□ 0.75
VEGFA-211ENST00000476772 PKIAP61925 76 aa19.74■□□□□ 0.75
VEGFA-211ENST00000476772 TINCRA0A1B0GVN0 87 aa19.71■□□□□ 0.75
VEGFA-211ENST00000476772 WFDC10BQ8IUB3 73 aa19.71■□□□□ 0.75
VEGFA-211ENST00000476772 IGKV3OR2-268A0A0C4DH90 116 aa19.71■□□□□ 0.75
VEGFA-211ENST00000476772 TSTD3H0UI37 97 aa19.71■□□□□ 0.75
VEGFA-211ENST00000476772 TMEM170BQ5T4T1 132 aa19.71■□□□□ 0.75
VEGFA-211ENST00000476772 ZNF22P17026 224 aaPredicted RBP19.7■□□□□ 0.74
VEGFA-211ENST00000476772 PCP4L1A6NKN8 68 aa19.69■□□□□ 0.74
VEGFA-211ENST00000476772 LINC00242Q5T6M2 205 aa19.68■□□□□ 0.74
VEGFA-211ENST00000476772 FAM19A3Q7Z5A8 133 aa19.68■□□□□ 0.74
VEGFA-211ENST00000476772 ANGP03950 147 aaKnown RBP19.68■□□□□ 0.74
VEGFA-211ENST00000476772 C14orf144Q96I85 54 aa19.68■□□□□ 0.74
VEGFA-211ENST00000476772 CLPSL2Q6UWE3 100 aa19.67■□□□□ 0.74
VEGFA-211ENST00000476772 GEMIN7Q9H840 131 aaKnown RBP19.67■□□□□ 0.74
VEGFA-211ENST00000476772 DYNC2H1Q8NCM8 4307 aaKnown RBP19.66■□□□□ 0.74
VEGFA-211ENST00000476772 IGKV2D-26A0A0A0MRZ7 120 aa19.66■□□□□ 0.74
VEGFA-211ENST00000476772 COX6A2Q02221 97 aa19.66■□□□□ 0.74
VEGFA-211ENST00000476772 LINC00269Q8N2A0 174 aa19.65■□□□□ 0.74
VEGFA-211ENST00000476772 FBN3Q75N90 2809 aa19.65■□□□□ 0.74
VEGFA-211ENST00000476772 IGHV3-30P01768 117 aa19.65■□□□□ 0.74
VEGFA-211ENST00000476772 IGHV3-33P01772 117 aa19.65■□□□□ 0.74
VEGFA-211ENST00000476772 IGHV3-30-3P0DP02 117 aa19.65■□□□□ 0.74
VEGFA-211ENST00000476772 IGHV3-30-5P0DP03 117 aa19.65■□□□□ 0.74
VEGFA-211ENST00000476772 LINC00588Q9Y4M8 146 aa19.65■□□□□ 0.74
VEGFA-211ENST00000476772 NMUP48645 174 aa19.64■□□□□ 0.73
VEGFA-211ENST00000476772 HERVK_113P63121 156 aa19.64■□□□□ 0.73
VEGFA-211ENST00000476772 LINC00469Q8N7U9 141 aa19.64■□□□□ 0.73
VEGFA-211ENST00000476772 SEC11AP67812 179 aa19.63■□□□□ 0.73
VEGFA-211ENST00000476772 LINC00959A0A1B0GUT2 108 aa19.62■□□□□ 0.73
VEGFA-211ENST00000476772 NUPR2A6NF83 97 aa19.62■□□□□ 0.73
VEGFA-211ENST00000476772 TMEM223A0PJW6 202 aa19.62■□□□□ 0.73
VEGFA-211ENST00000476772 CCL18P55774 89 aa19.62■□□□□ 0.73
VEGFA-211ENST00000476772 HERVK_113P61574 105 aa19.62■□□□□ 0.73
VEGFA-211ENST00000476772 TP73-AS1Q9UF72 201 aa19.62■□□□□ 0.73
VEGFA-211ENST00000476772 CDKN2A-AS1Q9UH64 79 aa19.62■□□□□ 0.73
VEGFA-211ENST00000476772 MRPS16Q9Y3D3 137 aaKnown RBP19.62■□□□□ 0.73
VEGFA-211ENST00000476772 IGLV5-45A0A087WSX0 123 aa19.61■□□□□ 0.73
VEGFA-211ENST00000476772 E9PLD3 99 aa19.61■□□□□ 0.73
VEGFA-211ENST00000476772 APLNQ9ULZ1 77 aa19.61■□□□□ 0.73
VEGFA-211ENST00000476772 DNAH7Q8WXX0 4024 aa19.61■□□□□ 0.73
VEGFA-211ENST00000476772 REG3AQ06141 175 aa19.6■□□□□ 0.73
VEGFA-211ENST00000476772 KLK12Q9UKR0 248 aa19.6■□□□□ 0.73
VEGFA-211ENST00000476772 COX8AP10176 69 aa19.59■□□□□ 0.73
VEGFA-211ENST00000476772 PCP2Q8IVA1 136 aa19.59■□□□□ 0.73
VEGFA-211ENST00000476772 MIEN1Q9BRT3 115 aa19.59■□□□□ 0.73
VEGFA-211ENST00000476772 UQCR10Q9UDW1 63 aa19.59■□□□□ 0.73
VEGFA-211ENST00000476772 SS18Q15532 418 aa19.57■□□□□ 0.72
VEGFA-211ENST00000476772 TTTY13Q9BZ97 58 aa19.57■□□□□ 0.72
VEGFA-211ENST00000476772 KLK5Q9Y337 293 aaPredicted RBP19.57■□□□□ 0.72
VEGFA-211ENST00000476772 IGHV3-64A0A075B6Q5 118 aa19.56■□□□□ 0.72
VEGFA-211ENST00000476772 LINC01556Q5JQF7 62 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms