RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.8□□□□□ -2.28
NPHP3-207ENST00000476742 ZCCHC23Q6ZST2 131 aa0.8□□□□□ -2.28
NPHP3-207ENST00000476742 ZNF833PQ6ZTB9 187 aa0.8□□□□□ -2.28
NPHP3-207ENST00000476742 Q86TA4 180 aa0.8□□□□□ -2.28
NPHP3-207ENST00000476742 FAM223AQ8IWN6 122 aa0.8□□□□□ -2.28
NPHP3-207ENST00000476742 TOMM5Q8N4H5 51 aa0.8□□□□□ -2.28
NPHP3-207ENST00000476742 Q8TAT8 98 aa0.8□□□□□ -2.28
NPHP3-207ENST00000476742 AMELXQ99217 191 aa0.8□□□□□ -2.28
NPHP3-207ENST00000476742 TMEM14BQ9NUH8 114 aa0.8□□□□□ -2.28
NPHP3-207ENST00000476742 LENEPQ9Y5L5 61 aa0.8□□□□□ -2.28
NPHP3-207ENST00000476742 LHFPL6Q9Y693 200 aa0.8□□□□□ -2.28
NPHP3-207ENST00000476742 CLTCQ00610 1675 aaKnown RBP0.8□□□□□ -2.28
NPHP3-207ENST00000476742 LRRIQ1Q96JM4 1722 aa0.8□□□□□ -2.28
NPHP3-207ENST00000476742 KIDINS220Q9ULH0 1771 aa0.8□□□□□ -2.28
NPHP3-207ENST00000476742 MUC4Q99102 2169 aa0.8□□□□□ -2.28
NPHP3-207ENST00000476742 TRPM7Q96QT4 1865 aa0.8□□□□□ -2.28
NPHP3-207ENST00000476742 PTPRFP10586 1907 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 PTPRDP23468 1912 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 URB2Q14146 1524 aaKnown RBP0.79□□□□□ -2.28
NPHP3-207ENST00000476742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.79□□□□□ -2.28
NPHP3-207ENST00000476742 FRMPD1Q5SYB0 1578 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 LAMC3Q9Y6N6 1575 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 DOCK11Q5JSL3 2073 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 MYOFQ9NZM1 2061 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 SPTBP11277 2137 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 ZGRF1Q86YA3 2104 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 MED12LQ86YW9 2145 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 ROBO1Q9Y6N7 1651 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 MALRD1Q5VYJ5 2156 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 KNDC1Q76NI1 1749 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 MON2Q7Z3U7 1717 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 RGPD8O14715 1765 aaPredicted RBP0.79□□□□□ -2.28
NPHP3-207ENST00000476742 STRCQ7RTU9 1775 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 RGPD5Q99666 1765 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 IGLV3-32A0A0A0MS00 114 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 A0A0J9YY99 117 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 CTXND1A0A1B0GTU2 59 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 C2orf70A6NJV1 201 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 HMGN4O00479 90 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 ARMS2P0C7Q2 107 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 UBE2D1P51668 147 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 EFNA4P52798 201 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 CNBPP62633 177 aaKnown RBP0.79□□□□□ -2.28
NPHP3-207ENST00000476742 C1orf137Q5JT78 98 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 Q6JHZ5 121 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 CYSTM1Q9H1C7 97 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 WFDC10AQ9H1F0 79 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 CDC42SE2Q9NRR3 84 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 TMEM14CQ9P0S9 112 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 KLK9Q9UKQ9 250 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 HILPDAQ9Y5L2 63 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 V9GYV3 84 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 SLX4Q8IY92 1834 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 NRXN1Q9ULB1 1477 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 SHANK2Q9UPX8 1470 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 KMT2BQ9UMN6 2715 aaPredicted RBP0.79□□□□□ -2.28
NPHP3-207ENST00000476742 CUX1P39880 1505 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 SYCP2Q9BX26 1530 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 BAZ2BQ9UIF8 2168 aaKnown RBP0.79□□□□□ -2.28
NPHP3-207ENST00000476742 CFAP74Q9C0B2 1584 aa0.79□□□□□ -2.28
NPHP3-207ENST00000476742 MYO5CQ9NQX4 1742 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.78□□□□□ -2.28
NPHP3-207ENST00000476742 DOCK2Q92608 1830 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 EML5Q05BV3 1969 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 TRBV6-7A0A0A0MS04 114 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 A0A1B0GUT8 65 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 LOC101927531A0A1B0GV80 90 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 NUPR2A6NF83 97 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 FAM223BA6NKX1 122 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 F8VRH5 84 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 JMJD7-PLA2G4BH0Y9G9 81 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 NDUFB1O75438 58 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 PPYP01298 95 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 IGHV3-30P01768 117 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 PRH1P02810 166 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 MGPP08493 103 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 IGHV3-30-5P0DP03 117 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 HMGA1P17096 107 aaKnown RBP0.78□□□□□ -2.28
NPHP3-207ENST00000476742 PI4KAP42356 2102 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 SPINT3P49223 89 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 KRTAP10-4P60372 401 aaPredicted RBP0.78□□□□□ -2.28
NPHP3-207ENST00000476742 PDE6HQ13956 83 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 Q5VV11 94 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 CSAG1Q6PB30 78 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 C9orf163Q8N9P6 203 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 SPACA4Q8TDM5 124 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 COX7B2Q8TF08 81 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 SMIM4Q8WVI0 70 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 BPESC1Q9GZL8 116 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 NDUFA4L2Q9NRX3 87 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 PSENENQ9NZ42 101 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 SNURFQ9Y675 71 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 RP1P56715 2156 aa0.78□□□□□ -2.28
NPHP3-207ENST00000476742 NKTRP30414 1462 aaKnown RBP0.78□□□□□ -2.28
NPHP3-207ENST00000476742 DIP2BQ9P265 1576 aa0.78□□□□□ -2.29
NPHP3-207ENST00000476742 PREX2Q70Z35 1606 aa0.78□□□□□ -2.29
NPHP3-207ENST00000476742 USP54Q70EL1 1684 aa0.78□□□□□ -2.29
NPHP3-207ENST00000476742 TOPAZ1Q8N9V7 1692 aa0.78□□□□□ -2.29
NPHP3-207ENST00000476742 ITSN1Q15811 1721 aa0.78□□□□□ -2.29
NPHP3-207ENST00000476742 NWD2Q9ULI1 1742 aa0.78□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms